RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 CPS1P31327 1500 aa18.66■□□□□ 0.58
SRSF1-202ENST00000578430 C11orf95C9JLR9 678 aaPredicted RBP18.66■□□□□ 0.58
SRSF1-202ENST00000578430 SOCS7O14512 581 aa18.65■□□□□ 0.58
SRSF1-202ENST00000578430 DIEXFQ68CQ4 756 aaKnown RBP18.65■□□□□ 0.58
SRSF1-202ENST00000578430 QRICH2Q9H0J4 1663 aa18.65■□□□□ 0.58
SRSF1-202ENST00000578430 POGKQ9P215 609 aa18.64■□□□□ 0.57
SRSF1-202ENST00000578430 MAPK8IP2Q13387 824 aaPredicted RBP18.63■□□□□ 0.57
SRSF1-202ENST00000578430 PUS7Q96PZ0 661 aaKnown RBP18.63■□□□□ 0.57
SRSF1-202ENST00000578430 PRAM1Q96QH2 718 aa18.63■□□□□ 0.57
SRSF1-202ENST00000578430 PTCH1Q13635 1447 aa18.62■□□□□ 0.57
SRSF1-202ENST00000578430 PTPRUQ92729 1446 aa18.61■□□□□ 0.57
SRSF1-202ENST00000578430 DDX10Q13206 875 aaKnown RBP18.61■□□□□ 0.57
SRSF1-202ENST00000578430 AMOTL2Q9Y2J4 779 aa18.61■□□□□ 0.57
SRSF1-202ENST00000578430 EVC2Q86UK5 1308 aa18.6■□□□□ 0.57
SRSF1-202ENST00000578430 XRN1Q8IZH2 1706 aaKnown RBP18.6■□□□□ 0.57
SRSF1-202ENST00000578430 UBAP1LF5GYI3 381 aa18.59■□□□□ 0.57
SRSF1-202ENST00000578430 CHD2O14647 1828 aaKnown RBP18.58■□□□□ 0.57
SRSF1-202ENST00000578430 ROBO2Q9HCK4 1378 aa18.56■□□□□ 0.56
SRSF1-202ENST00000578430 KCNA6P17658 529 aa18.56■□□□□ 0.56
SRSF1-202ENST00000578430 WAPLQ7Z5K2 1190 aa18.55■□□□□ 0.56
SRSF1-202ENST00000578430 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
SRSF1-202ENST00000578430 NWD1Q149M9 1564 aa18.55■□□□□ 0.56
SRSF1-202ENST00000578430 SAFB2Q14151 953 aaKnown RBP eCLIP18.54■□□□□ 0.56
SRSF1-202ENST00000578430 PLEKHH1Q9ULM0 1364 aa18.54■□□□□ 0.56
SRSF1-202ENST00000578430 TULP4Q9NRJ4 1543 aa18.54■□□□□ 0.56
SRSF1-202ENST00000578430 MINK1Q8N4C8 1332 aaPredicted RBP18.53■□□□□ 0.56
SRSF1-202ENST00000578430 ADGRB2O60241 1585 aa18.52■□□□□ 0.56
SRSF1-202ENST00000578430 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
SRSF1-202ENST00000578430 NKTRP30414 1462 aaKnown RBP18.51■□□□□ 0.55
SRSF1-202ENST00000578430 NINLQ9Y2I6 1382 aa18.5■□□□□ 0.55
SRSF1-202ENST00000578430 WASLO00401 505 aaPredicted RBP18.48■□□□□ 0.55
SRSF1-202ENST00000578430 SRPK2P78362 688 aaKnown RBP18.48■□□□□ 0.55
SRSF1-202ENST00000578430 CDK19Q9BWU1 502 aa18.48■□□□□ 0.55
SRSF1-202ENST00000578430 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.47■□□□□ 0.55
SRSF1-202ENST00000578430 MYOM1P52179 1685 aa18.46■□□□□ 0.55
SRSF1-202ENST00000578430 CABP2Q9NPB3 220 aa18.45■□□□□ 0.54
SRSF1-202ENST00000578430 NCOA3Q9Y6Q9 1424 aa18.45■□□□□ 0.54
SRSF1-202ENST00000578430 PIP4K2BP78356 416 aa18.44■□□□□ 0.54
SRSF1-202ENST00000578430 HSPA1LP34931 641 aa18.43■□□□□ 0.54
SRSF1-202ENST00000578430 PANK3Q9H999 370 aa18.43■□□□□ 0.54
SRSF1-202ENST00000578430 ANP32CO43423 234 aa18.42■□□□□ 0.54
SRSF1-202ENST00000578430 ADGRL3Q9HAR2 1447 aa18.41■□□□□ 0.54
SRSF1-202ENST00000578430 PROSER2Q86WR7 435 aaPredicted RBP18.41■□□□□ 0.54
SRSF1-202ENST00000578430 CDC42BPGQ6DT37 1551 aa18.4■□□□□ 0.54
SRSF1-202ENST00000578430 TMC1Q8TDI8 760 aa18.4■□□□□ 0.54
SRSF1-202ENST00000578430 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
SRSF1-202ENST00000578430 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.53
SRSF1-202ENST00000578430 TOM1O60784 492 aa18.39■□□□□ 0.53
SRSF1-202ENST00000578430 NUDT16Q96DE0 195 aaKnown RBP18.39■□□□□ 0.53
SRSF1-202ENST00000578430 CCDC61Q9Y6R9 512 aa18.39■□□□□ 0.53
SRSF1-202ENST00000578430 ANKRD36BQ8N2N9 1353 aa18.39■□□□□ 0.53
SRSF1-202ENST00000578430 MED1Q15648 1581 aaPredicted RBP18.38■□□□□ 0.53
SRSF1-202ENST00000578430 SLC12A5Q9H2X9 1139 aa18.38■□□□□ 0.53
SRSF1-202ENST00000578430 TERF2IPQ9NYB0 399 aa18.38■□□□□ 0.53
SRSF1-202ENST00000578430 KTN1Q86UP2 1357 aaKnown RBP18.38■□□□□ 0.53
SRSF1-202ENST00000578430 ATP7BP35670 1465 aa18.38■□□□□ 0.53
SRSF1-202ENST00000578430 NALCNQ8IZF0 1738 aa18.37■□□□□ 0.53
SRSF1-202ENST00000578430 KNSTRNQ9Y448 316 aa18.37■□□□□ 0.53
SRSF1-202ENST00000578430 STRCP1A6NGW2 1772 aa18.37■□□□□ 0.53
SRSF1-202ENST00000578430 MIER1Q8N108 512 aa18.36■□□□□ 0.53
SRSF1-202ENST00000578430 NPC1L1Q9UHC9 1359 aa18.36■□□□□ 0.53
SRSF1-202ENST00000578430 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
SRSF1-202ENST00000578430 HDGFL2Q7Z4V5 671 aaPredicted RBP18.35■□□□□ 0.53
SRSF1-202ENST00000578430 C14orf37Q86TY3 774 aa18.35■□□□□ 0.53
SRSF1-202ENST00000578430 DCCP43146 1447 aa18.34■□□□□ 0.53
SRSF1-202ENST00000578430 PPIP5K1Q6PFW1 1433 aa18.34■□□□□ 0.53
SRSF1-202ENST00000578430 TMEM94Q12767 1356 aa18.34■□□□□ 0.53
SRSF1-202ENST00000578430 PRR36Q9H6K5 1346 aa18.34■□□□□ 0.53
SRSF1-202ENST00000578430 C19orf44Q9H6X5 657 aa18.34■□□□□ 0.53
SRSF1-202ENST00000578430 CABP1Q9NZU7 370 aa18.34■□□□□ 0.53
SRSF1-202ENST00000578430 ITSN1Q15811 1721 aa18.34■□□□□ 0.53
SRSF1-202ENST00000578430 PLEKHG3A1L390 1219 aa18.33■□□□□ 0.52
SRSF1-202ENST00000578430 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.52
SRSF1-202ENST00000578430 TOPAZ1Q8N9V7 1692 aa18.33■□□□□ 0.52
SRSF1-202ENST00000578430 ZNF692Q9BU19 519 aaPredicted RBP18.32■□□□□ 0.52
SRSF1-202ENST00000578430 USP32Q8NFA0 1604 aa18.31■□□□□ 0.52
SRSF1-202ENST00000578430 RALBP1Q15311 655 aa18.31■□□□□ 0.52
SRSF1-202ENST00000578430 CARD14Q9BXL6 1004 aa18.31■□□□□ 0.52
SRSF1-202ENST00000578430 CD163L1Q9NR16 1453 aa18.31■□□□□ 0.52
SRSF1-202ENST00000578430 CPSF1Q10570 1443 aaKnown RBP18.31■□□□□ 0.52
SRSF1-202ENST00000578430 A0A1W2PP64 1363 aa18.3■□□□□ 0.52
SRSF1-202ENST00000578430 LRRC7Q96NW7 1537 aa18.3■□□□□ 0.52
SRSF1-202ENST00000578430 CCER2I3L3R5 266 aa18.3■□□□□ 0.52
SRSF1-202ENST00000578430 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
SRSF1-202ENST00000578430 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
SRSF1-202ENST00000578430 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
SRSF1-202ENST00000578430 NSD2O96028 1365 aa18.29■□□□□ 0.52
SRSF1-202ENST00000578430 MSH6P52701 1360 aa18.29■□□□□ 0.52
SRSF1-202ENST00000578430 CGNL1Q0VF96 1302 aa18.28■□□□□ 0.52
SRSF1-202ENST00000578430 ATF3P18847 181 aa18.27■□□□□ 0.52
SRSF1-202ENST00000578430 CADPS2Q86UW7 1296 aa18.27■□□□□ 0.52
SRSF1-202ENST00000578430 PARD3Q8TEW0 1356 aa18.27■□□□□ 0.51
SRSF1-202ENST00000578430 EDC4Q6P2E9 1401 aaKnown RBP18.26■□□□□ 0.51
SRSF1-202ENST00000578430 AKAP12Q02952 1782 aa18.26■□□□□ 0.51
SRSF1-202ENST00000578430 POLR3AO14802 1390 aaPredicted RBP18.26■□□□□ 0.51
SRSF1-202ENST00000578430 NUTM2FA1L443 756 aa18.25■□□□□ 0.51
SRSF1-202ENST00000578430 MON2Q7Z3U7 1717 aa18.24■□□□□ 0.51
SRSF1-202ENST00000578430 XIRP1Q702N8 1843 aaKnown RBP18.24■□□□□ 0.51
SRSF1-202ENST00000578430 BRD4O60885 1362 aaPredicted RBP18.24■□□□□ 0.51
SRSF1-202ENST00000578430 ACEP12821 1306 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms