RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 ANKRD36BQ8N2N9 1353 aa37.09■■■■□ 3.53
LIMD2-203ENST00000578067 BLMP54132 1417 aaPredicted RBP37.09■■■■□ 3.53
LIMD2-203ENST00000578067 NINLQ9Y2I6 1382 aa37.09■■■■□ 3.53
LIMD2-203ENST00000578067 ABCC11Q96J66 1382 aa37.08■■■■□ 3.53
LIMD2-203ENST00000578067 SRPK2P78362 688 aaKnown RBP37.08■■■■□ 3.53
LIMD2-203ENST00000578067 USP32Q8NFA0 1604 aa37.07■■■■□ 3.52
LIMD2-203ENST00000578067 C3P01024 1663 aa37.06■■■■□ 3.52
LIMD2-203ENST00000578067 SENP3-EIF4A1A0A087X0R7 540 aa37.06■■■■□ 3.52
LIMD2-203ENST00000578067 FER1L4A9Z1Z3 1794 aa37.05■■■■□ 3.52
LIMD2-203ENST00000578067 ATAD2Q6PL18 1390 aa37.05■■■■□ 3.52
LIMD2-203ENST00000578067 NUDCQ9Y266 331 aa37.05■■■■□ 3.52
LIMD2-203ENST00000578067 METP08581 1390 aa37.02■■■■□ 3.52
LIMD2-203ENST00000578067 CGNL1Q0VF96 1302 aa37.01■■■■□ 3.52
LIMD2-203ENST00000578067 WDR43Q15061 677 aaKnown RBP eCLIP37.01■■■■□ 3.52
LIMD2-203ENST00000578067 ADAMTS8Q9UP79 889 aa37■■■■□ 3.51
LIMD2-203ENST00000578067 MORC1Q86VD1 984 aa36.98■■■■□ 3.51
LIMD2-203ENST00000578067 CDK19Q9BWU1 502 aa36.98■■■■□ 3.51
LIMD2-203ENST00000578067 WAPLQ7Z5K2 1190 aa36.97■■■■□ 3.51
LIMD2-203ENST00000578067 BCANQ96GW7 911 aa36.97■■■■□ 3.51
LIMD2-203ENST00000578067 PLEKHH1Q9ULM0 1364 aa36.95■■■■□ 3.51
LIMD2-203ENST00000578067 NSD2O96028 1365 aa36.94■■■■□ 3.5
LIMD2-203ENST00000578067 A0A1W2PP64 1363 aa36.93■■■■□ 3.5
LIMD2-203ENST00000578067 PDE3BQ13370 1112 aa36.92■■■■□ 3.5
LIMD2-203ENST00000578067 SIRT1Q96EB6 747 aa36.92■■■■□ 3.5
LIMD2-203ENST00000578067 PLEKHG1Q9ULL1 1385 aa36.92■■■■□ 3.5
LIMD2-203ENST00000578067 TECPR2O15040 1411 aa36.91■■■■□ 3.5
LIMD2-203ENST00000578067 KNDC1Q76NI1 1749 aa36.91■■■■□ 3.5
LIMD2-203ENST00000578067 TERF2IPQ9NYB0 399 aa36.91■■■■□ 3.5
LIMD2-203ENST00000578067 LTKP29376 864 aa36.9■■■■□ 3.5
LIMD2-203ENST00000578067 SALL2Q9Y467 1007 aaPredicted RBP36.9■■■■□ 3.5
LIMD2-203ENST00000578067 FAM135BQ49AJ0 1406 aa36.89■■■■□ 3.5
LIMD2-203ENST00000578067 ADAMTS13Q76LX8 1427 aa36.89■■■■□ 3.5
LIMD2-203ENST00000578067 PLPPR3Q6T4P5 718 aa36.88■■■■□ 3.5
LIMD2-203ENST00000578067 DNAJC5Q9H3Z4 198 aa36.88■■■■□ 3.5
LIMD2-203ENST00000578067 POLR3AO14802 1390 aaPredicted RBP36.88■■■■□ 3.49
LIMD2-203ENST00000578067 TXNDC2Q86VQ3 553 aa36.88■■■■□ 3.49
LIMD2-203ENST00000578067 EID1Q9Y6B2 187 aa36.86■■■■□ 3.49
LIMD2-203ENST00000578067 SLIT1O75093 1534 aa36.86■■■■□ 3.49
LIMD2-203ENST00000578067 CD163L1Q9NR16 1453 aa36.85■■■■□ 3.49
LIMD2-203ENST00000578067 CPS1P31327 1500 aa36.85■■■■□ 3.49
LIMD2-203ENST00000578067 ARHGAP23Q9P227 1491 aa36.85■■■■□ 3.49
LIMD2-203ENST00000578067 IRX6P78412 446 aaPredicted RBP36.85■■■■□ 3.49
LIMD2-203ENST00000578067 ERICH6BQ5W0A0 696 aa36.85■■■■□ 3.49
LIMD2-203ENST00000578067 HDGFL2Q7Z4V5 671 aaPredicted RBP36.82■■■■□ 3.48
LIMD2-203ENST00000578067 TNNT2P45379 298 aaPredicted RBP36.81■■■■□ 3.48
LIMD2-203ENST00000578067 PELP1Q8IZL8 1130 aaKnown RBP36.81■■■■□ 3.48
LIMD2-203ENST00000578067 CABP1Q9NZU7 370 aa36.81■■■■□ 3.48
LIMD2-203ENST00000578067 THEMISQ8N1K5 641 aaPredicted RBP36.8■■■■□ 3.48
LIMD2-203ENST00000578067 WASLO00401 505 aaPredicted RBP36.8■■■■□ 3.48
LIMD2-203ENST00000578067 MED14O60244 1454 aa36.78■■■■□ 3.48
LIMD2-203ENST00000578067 RNF123Q5XPI4 1314 aa36.76■■■■□ 3.47
LIMD2-203ENST00000578067 ATP7BP35670 1465 aa36.74■■■■□ 3.47
LIMD2-203ENST00000578067 MTHFSP49914 203 aa36.72■■■■□ 3.47
LIMD2-203ENST00000578067 ROBO2Q9HCK4 1378 aa36.72■■■■□ 3.47
LIMD2-203ENST00000578067 FYB1O15117 783 aa36.71■■■■□ 3.47
LIMD2-203ENST00000578067 CDCA7LQ96GN5 454 aa36.71■■■■□ 3.47
LIMD2-203ENST00000578067 RIMS1Q86UR5 1692 aaKnown RBP36.7■■■■□ 3.47
LIMD2-203ENST00000578067 CFAP53Q96M91 514 aa36.69■■■■□ 3.46
LIMD2-203ENST00000578067 SLC26A8Q96RN1 970 aa36.69■■■■□ 3.46
LIMD2-203ENST00000578067 GGNBP2Q9H3C7 697 aa36.69■■■■□ 3.46
LIMD2-203ENST00000578067 CCDC146Q8IYE0 955 aa36.68■■■■□ 3.46
LIMD2-203ENST00000578067 TBX22Q9Y458 520 aa36.68■■■■□ 3.46
LIMD2-203ENST00000578067 SHPRHQ149N8 1683 aa36.67■■■■□ 3.46
LIMD2-203ENST00000578067 ANKRD26Q9UPS8 1709 aa36.67■■■■□ 3.46
LIMD2-203ENST00000578067 PPIP5K1Q6PFW1 1433 aa36.65■■■■□ 3.46
LIMD2-203ENST00000578067 NUDT16Q96DE0 195 aaKnown RBP36.64■■■■□ 3.46
LIMD2-203ENST00000578067 PTPRUQ92729 1446 aa36.64■■■■□ 3.46
LIMD2-203ENST00000578067 CEP170BQ9Y4F5 1589 aaPredicted RBP36.64■■■■□ 3.46
LIMD2-203ENST00000578067 ZNF521Q96K83 1311 aa36.64■■■■□ 3.46
LIMD2-203ENST00000578067 DIP2AQ14689 1571 aa36.62■■■■□ 3.45
LIMD2-203ENST00000578067 PPP4R2Q9NY27 417 aa36.61■■■■□ 3.45
LIMD2-203ENST00000578067 CPSF1Q10570 1443 aaKnown RBP36.61■■■■□ 3.45
LIMD2-203ENST00000578067 RCAN3Q9UKA8 241 aa36.61■■■■□ 3.45
LIMD2-203ENST00000578067 ADAMTSL3P82987 1691 aa36.6■■■■□ 3.45
LIMD2-203ENST00000578067 ADGRB2O60241 1585 aa36.6■■■■□ 3.45
LIMD2-203ENST00000578067 APAF1O14727 1248 aa36.6■■■■□ 3.45
LIMD2-203ENST00000578067 NGEFQ8N5V2 710 aa36.6■■■■□ 3.45
LIMD2-203ENST00000578067 CCDC61Q9Y6R9 512 aa36.6■■■■□ 3.45
LIMD2-203ENST00000578067 KIF20BQ96Q89 1820 aa36.59■■■■□ 3.45
LIMD2-203ENST00000578067 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.57■■■■□ 3.45
LIMD2-203ENST00000578067 AMOTL2Q9Y2J4 779 aa36.57■■■■□ 3.44
LIMD2-203ENST00000578067 EDC4Q6P2E9 1401 aaKnown RBP36.55■■■■□ 3.44
LIMD2-203ENST00000578067 GOLGA2Q08379 1002 aa36.55■■■■□ 3.44
LIMD2-203ENST00000578067 CDC42BPGQ6DT37 1551 aa36.55■■■■□ 3.44
LIMD2-203ENST00000578067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.54■■■■□ 3.44
LIMD2-203ENST00000578067 PTCH1Q13635 1447 aa36.52■■■■□ 3.44
LIMD2-203ENST00000578067 PRR36Q9H6K5 1346 aa36.52■■■■□ 3.44
LIMD2-203ENST00000578067 RUNDC1Q96C34 613 aa36.51■■■■□ 3.43
LIMD2-203ENST00000578067 NCKAP5LQ9HCH0 1330 aa36.5■■■■□ 3.43
LIMD2-203ENST00000578067 RRP1P56182 461 aaKnown RBP36.49■■■■□ 3.43
LIMD2-203ENST00000578067 DUSP27Q5VZP5 1158 aa36.47■■■■□ 3.43
LIMD2-203ENST00000578067 ZNF142P52746 1687 aaPredicted RBP36.47■■■■□ 3.43
LIMD2-203ENST00000578067 ZNF692Q9BU19 519 aaPredicted RBP36.46■■■■□ 3.43
LIMD2-203ENST00000578067 SLFN5Q08AF3 891 aa36.46■■■■□ 3.43
LIMD2-203ENST00000578067 COL3A1P02461 1466 aaPredicted RBP36.45■■■■□ 3.43
LIMD2-203ENST00000578067 MON2Q7Z3U7 1717 aa36.45■■■■□ 3.43
LIMD2-203ENST00000578067 PIK3R4Q99570 1358 aa36.44■■■■□ 3.42
LIMD2-203ENST00000578067 AKAP12Q02952 1782 aa36.43■■■■□ 3.42
LIMD2-203ENST00000578067 U2AF1L5P0DN76 240 aaPredicted RBP36.42■■■■□ 3.42
LIMD2-203ENST00000578067 U2AF1Q01081 240 aaKnown RBP eCLIP36.42■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms