RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 ZFYVE9O95405 1425 aa14.51□□□□□ -0.09
CRLF3-202ENST00000577725 TONSLQ96HA7 1378 aa14.51□□□□□ -0.09
CRLF3-202ENST00000577725 RPRD2Q5VT52 1461 aaKnown RBP14.5□□□□□ -0.09
CRLF3-202ENST00000577725 SPHKAPQ2M3C7 1700 aa14.49□□□□□ -0.09
CRLF3-202ENST00000577725 BAG6P46379 1132 aa14.49□□□□□ -0.09
CRLF3-202ENST00000577725 SLC52A1Q9NWF4 448 aa14.49□□□□□ -0.09
CRLF3-202ENST00000577725 DCAF8L1A6NGE4 600 aa14.47□□□□□ -0.09
CRLF3-202ENST00000577725 R3HDM1Q15032 1099 aaKnown RBP14.47□□□□□ -0.09
CRLF3-202ENST00000577725 RIMS2Q9UQ26 1411 aa14.47□□□□□ -0.09
CRLF3-202ENST00000577725 AMOTL2Q9Y2J4 779 aa14.46□□□□□ -0.09
CRLF3-202ENST00000577725 NOS1P29475 1434 aa14.46□□□□□ -0.09
CRLF3-202ENST00000577725 ADAMTS13Q76LX8 1427 aa14.46□□□□□ -0.09
CRLF3-202ENST00000577725 CLTCL1P53675 1640 aa14.45□□□□□ -0.1
CRLF3-202ENST00000577725 CCDC144AA2RUR9 1427 aa14.45□□□□□ -0.1
CRLF3-202ENST00000577725 L3MBTL2Q969R5 705 aa14.45□□□□□ -0.1
CRLF3-202ENST00000577725 TRPM2O94759 1503 aa14.45□□□□□ -0.1
CRLF3-202ENST00000577725 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.44□□□□□ -0.1
CRLF3-202ENST00000577725 RALGAPBQ86X10 1494 aa14.44□□□□□ -0.1
CRLF3-202ENST00000577725 SOS2Q07890 1332 aaPredicted RBP14.43□□□□□ -0.1
CRLF3-202ENST00000577725 TIMELESSQ9UNS1 1208 aa14.43□□□□□ -0.1
CRLF3-202ENST00000577725 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
CRLF3-202ENST00000577725 C1QTNF8P60827 252 aa14.42□□□□□ -0.1
CRLF3-202ENST00000577725 ZNF784Q8NCA9 323 aaPredicted RBP14.42□□□□□ -0.1
CRLF3-202ENST00000577725 SEPT12Q8IYM1 358 aa14.41□□□□□ -0.1
CRLF3-202ENST00000577725 PTPRUQ92729 1446 aa14.41□□□□□ -0.1
CRLF3-202ENST00000577725 GLI3P10071 1580 aa14.4□□□□□ -0.1
CRLF3-202ENST00000577725 MYOM2P54296 1465 aa14.4□□□□□ -0.1
CRLF3-202ENST00000577725 UNC5CLQ8IV45 518 aa14.4□□□□□ -0.1
CRLF3-202ENST00000577725 RGL3Q3MIN7 710 aa14.39□□□□□ -0.11
CRLF3-202ENST00000577725 KRT27Q7Z3Y8 459 aa14.39□□□□□ -0.11
CRLF3-202ENST00000577725 COL22A1Q8NFW1 1626 aaPredicted RBP14.39□□□□□ -0.11
CRLF3-202ENST00000577725 LAMC1P11047 1609 aa14.38□□□□□ -0.11
CRLF3-202ENST00000577725 EN1Q05925 392 aaPredicted RBP14.38□□□□□ -0.11
CRLF3-202ENST00000577725 C1orf167Q5SNV9 1468 aa14.38□□□□□ -0.11
CRLF3-202ENST00000577725 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
CRLF3-202ENST00000577725 ADGRL3Q9HAR2 1447 aa14.37□□□□□ -0.11
CRLF3-202ENST00000577725 NBPF8Q3BBV2 869 aa14.36□□□□□ -0.11
CRLF3-202ENST00000577725 ZNF326Q5BKZ1 582 aaKnown RBP14.36□□□□□ -0.11
CRLF3-202ENST00000577725 KIF1BO60333 1816 aa14.36□□□□□ -0.11
CRLF3-202ENST00000577725 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.35□□□□□ -0.11
CRLF3-202ENST00000577725 SPATA31E1Q6ZUB1 1445 aa14.35□□□□□ -0.11
CRLF3-202ENST00000577725 DCAF11Q8TEB1 546 aa14.35□□□□□ -0.11
CRLF3-202ENST00000577725 ONECUT3O60422 494 aaPredicted RBP14.34□□□□□ -0.11
CRLF3-202ENST00000577725 CHGAP10645 457 aaKnown RBP14.34□□□□□ -0.11
CRLF3-202ENST00000577725 SLIT2O94813 1529 aa14.34□□□□□ -0.11
CRLF3-202ENST00000577725 BRWD3Q6RI45 1802 aa14.34□□□□□ -0.11
CRLF3-202ENST00000577725 NINLQ9Y2I6 1382 aa14.34□□□□□ -0.11
CRLF3-202ENST00000577725 TMEM131LA2VDJ0 1609 aa14.33□□□□□ -0.11
CRLF3-202ENST00000577725 PPP1R1BQ9UD71 204 aaPredicted RBP14.33□□□□□ -0.12
CRLF3-202ENST00000577725 ORAI2Q96SN7 254 aa14.32□□□□□ -0.12
CRLF3-202ENST00000577725 XRN1Q8IZH2 1706 aaKnown RBP14.32□□□□□ -0.12
CRLF3-202ENST00000577725 MYO5BQ9ULV0 1848 aa14.31□□□□□ -0.12
CRLF3-202ENST00000577725 DISP2A7MBM2 1401 aa14.31□□□□□ -0.12
CRLF3-202ENST00000577725 VPS72Q15906 364 aa14.3□□□□□ -0.12
CRLF3-202ENST00000577725 MARF1Q9Y4F3 1742 aaKnown RBP14.29□□□□□ -0.12
CRLF3-202ENST00000577725 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
CRLF3-202ENST00000577725 EZH2Q15910 746 aaKnown RBP14.28□□□□□ -0.12
CRLF3-202ENST00000577725 IFT172Q9UG01 1749 aa14.27□□□□□ -0.12
CRLF3-202ENST00000577725 PRAG1Q86YV5 1406 aa14.27□□□□□ -0.12
CRLF3-202ENST00000577725 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.12
CRLF3-202ENST00000577725 SPON1Q9HCB6 807 aa14.27□□□□□ -0.13
CRLF3-202ENST00000577725 A0A0G2JS52 829 aa14.26□□□□□ -0.13
CRLF3-202ENST00000577725 MYT1Q01538 1121 aa14.26□□□□□ -0.13
CRLF3-202ENST00000577725 HIRIP3Q9BW71 556 aaPredicted RBP14.26□□□□□ -0.13
CRLF3-202ENST00000577725 CCDC9Q9Y3X0 531 aaKnown RBP14.26□□□□□ -0.13
CRLF3-202ENST00000577725 NALCNQ8IZF0 1738 aa14.26□□□□□ -0.13
CRLF3-202ENST00000577725 PPLO60437 1756 aa14.25□□□□□ -0.13
CRLF3-202ENST00000577725 RGPD1P0DJD0 1748 aa14.25□□□□□ -0.13
CRLF3-202ENST00000577725 UTRNP46939 3433 aa14.24□□□□□ -0.13
CRLF3-202ENST00000577725 TRPM1Q7Z4N2 1603 aa14.24□□□□□ -0.13
CRLF3-202ENST00000577725 CEP350Q5VT06 3117 aa14.24□□□□□ -0.13
CRLF3-202ENST00000577725 METP08581 1390 aa14.23□□□□□ -0.13
CRLF3-202ENST00000577725 KCNQ2O43526 872 aa14.23□□□□□ -0.13
CRLF3-202ENST00000577725 CAMKK2Q96RR4 588 aa14.23□□□□□ -0.13
CRLF3-202ENST00000577725 PXDNQ92626 1479 aa14.23□□□□□ -0.13
CRLF3-202ENST00000577725 PARD3Q8TEW0 1356 aa14.22□□□□□ -0.13
CRLF3-202ENST00000577725 ADGRF5Q8IZF2 1346 aa14.22□□□□□ -0.13
CRLF3-202ENST00000577725 HSPA5P11021 654 aaKnown RBP14.22□□□□□ -0.13
CRLF3-202ENST00000577725 NEXMIFQ5QGS0 1516 aa14.21□□□□□ -0.13
CRLF3-202ENST00000577725 CAMTA1Q9Y6Y1 1673 aa14.21□□□□□ -0.13
CRLF3-202ENST00000577725 GIGYF1O75420 1035 aaPredicted RBP14.2□□□□□ -0.14
CRLF3-202ENST00000577725 NBPF1Q3BBV0 1214 aa14.2□□□□□ -0.14
CRLF3-202ENST00000577725 NBPF14Q5TI25 921 aa14.2□□□□□ -0.14
CRLF3-202ENST00000577725 NRXN3Q9Y4C0 1643 aa14.19□□□□□ -0.14
CRLF3-202ENST00000577725 ADGRB2O60241 1585 aa14.19□□□□□ -0.14
CRLF3-202ENST00000577725 XPCQ01831 940 aaPredicted RBP14.19□□□□□ -0.14
CRLF3-202ENST00000577725 FAM98CQ17RN3 349 aaKnown RBP14.19□□□□□ -0.14
CRLF3-202ENST00000577725 ROCK2O75116 1388 aaKnown RBP14.19□□□□□ -0.14
CRLF3-202ENST00000577725 FOXO3O43524 673 aa14.18□□□□□ -0.14
CRLF3-202ENST00000577725 ESCO1Q5FWF5 840 aa14.18□□□□□ -0.14
CRLF3-202ENST00000577725 FAM182BQ5T319 152 aa14.18□□□□□ -0.14
CRLF3-202ENST00000577725 CARD11Q9BXL7 1154 aa14.18□□□□□ -0.14
CRLF3-202ENST00000577725 LRPPRCP42704 1394 aaKnown RBP14.18□□□□□ -0.14
CRLF3-202ENST00000577725 USP32Q8NFA0 1604 aa14.18□□□□□ -0.14
CRLF3-202ENST00000577725 RPGRIP1LQ68CZ1 1315 aa14.17□□□□□ -0.14
CRLF3-202ENST00000577725 EIF4G2P78344 907 aaKnown RBP eCLIP14.17□□□□□ -0.14
CRLF3-202ENST00000577725 TNS1Q9HBL0 1735 aaKnown RBP14.17□□□□□ -0.14
CRLF3-202ENST00000577725 NRXN1Q9ULB1 1477 aa14.17□□□□□ -0.14
CRLF3-202ENST00000577725 HAP1P54257 671 aaPredicted RBP14.16□□□□□ -0.14
CRLF3-202ENST00000577725 CFAP70Q5T0N1 1121 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms