RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 SLIT2O94813 1529 aa11.62□□□□□ -0.55
RAB40B-210ENST00000576148 KCNQ2O43526 872 aa11.62□□□□□ -0.55
RAB40B-210ENST00000576148 LAMC1P11047 1609 aa11.61□□□□□ -0.55
RAB40B-210ENST00000576148 GIGYF1O75420 1035 aaPredicted RBP11.61□□□□□ -0.55
RAB40B-210ENST00000576148 NBPF8Q3BBV2 869 aa11.61□□□□□ -0.55
RAB40B-210ENST00000576148 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
RAB40B-210ENST00000576148 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
RAB40B-210ENST00000576148 DISP2A7MBM2 1401 aa11.6□□□□□ -0.55
RAB40B-210ENST00000576148 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.6□□□□□ -0.55
RAB40B-210ENST00000576148 CAMKK2Q96RR4 588 aa11.6□□□□□ -0.55
RAB40B-210ENST00000576148 CEP350Q5VT06 3117 aa11.6□□□□□ -0.55
RAB40B-210ENST00000576148 TMEM131LA2VDJ0 1609 aa11.57□□□□□ -0.56
RAB40B-210ENST00000576148 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
RAB40B-210ENST00000576148 FAM98CQ17RN3 349 aaKnown RBP11.57□□□□□ -0.56
RAB40B-210ENST00000576148 FAM182BQ5T319 152 aa11.57□□□□□ -0.56
RAB40B-210ENST00000576148 PARD3Q8TEW0 1356 aa11.56□□□□□ -0.56
RAB40B-210ENST00000576148 XPCQ01831 940 aaPredicted RBP11.56□□□□□ -0.56
RAB40B-210ENST00000576148 ESCO1Q5FWF5 840 aa11.56□□□□□ -0.56
RAB40B-210ENST00000576148 MARF1Q9Y4F3 1742 aaKnown RBP11.56□□□□□ -0.56
RAB40B-210ENST00000576148 XRN1Q8IZH2 1706 aaKnown RBP11.55□□□□□ -0.56
RAB40B-210ENST00000576148 FOXO3O43524 673 aa11.55□□□□□ -0.56
RAB40B-210ENST00000576148 APBA3O96018 575 aa11.55□□□□□ -0.56
RAB40B-210ENST00000576148 RGPD1P0DJD0 1748 aa11.55□□□□□ -0.56
RAB40B-210ENST00000576148 METP08581 1390 aa11.54□□□□□ -0.56
RAB40B-210ENST00000576148 MYOM3Q5VTT5 1437 aa11.54□□□□□ -0.56
RAB40B-210ENST00000576148 MYO5BQ9ULV0 1848 aa11.54□□□□□ -0.56
RAB40B-210ENST00000576148 TRIM37O94972 964 aa11.54□□□□□ -0.56
RAB40B-210ENST00000576148 GCC2Q8IWJ2 1684 aa11.54□□□□□ -0.56
RAB40B-210ENST00000576148 CAMTA1Q9Y6Y1 1673 aa11.54□□□□□ -0.56
RAB40B-210ENST00000576148 LRPPRCP42704 1394 aaKnown RBP11.54□□□□□ -0.56
RAB40B-210ENST00000576148 PXDNQ92626 1479 aa11.51□□□□□ -0.57
RAB40B-210ENST00000576148 FAM196AQ6ZSG2 479 aa11.51□□□□□ -0.57
RAB40B-210ENST00000576148 NALCNQ8IZF0 1738 aa11.51□□□□□ -0.57
RAB40B-210ENST00000576148 ADGRL2O95490 1459 aa11.51□□□□□ -0.57
RAB40B-210ENST00000576148 UTRNP46939 3433 aa11.49□□□□□ -0.57
RAB40B-210ENST00000576148 SPATA31A3Q5VYP0 1347 aa11.49□□□□□ -0.57
RAB40B-210ENST00000576148 ADGRB2O60241 1585 aa11.49□□□□□ -0.57
RAB40B-210ENST00000576148 ABCC5O15440 1437 aa11.48□□□□□ -0.57
RAB40B-210ENST00000576148 ANKRD30AQ9BXX3 1397 aa11.47□□□□□ -0.57
RAB40B-210ENST00000576148 FAM83GA6ND36 823 aa11.47□□□□□ -0.57
RAB40B-210ENST00000576148 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
RAB40B-210ENST00000576148 CABLES1Q8TDN4 633 aa11.47□□□□□ -0.57
RAB40B-210ENST00000576148 SYT17Q9BSW7 474 aa11.47□□□□□ -0.57
RAB40B-210ENST00000576148 USP32Q8NFA0 1604 aa11.46□□□□□ -0.57
RAB40B-210ENST00000576148 PTPN23Q9H3S7 1636 aa11.46□□□□□ -0.57
RAB40B-210ENST00000576148 TNS1Q9HBL0 1735 aaKnown RBP11.46□□□□□ -0.58
RAB40B-210ENST00000576148 CAPN15O75808 1086 aa11.45□□□□□ -0.58
RAB40B-210ENST00000576148 ZNF326Q5BKZ1 582 aaKnown RBP11.45□□□□□ -0.58
RAB40B-210ENST00000576148 FHDC1Q9C0D6 1143 aaPredicted RBP11.45□□□□□ -0.58
RAB40B-210ENST00000576148 CHIC2Q9UKJ5 165 aa11.45□□□□□ -0.58
RAB40B-210ENST00000576148 ROBO2Q9HCK4 1378 aa11.44□□□□□ -0.58
RAB40B-210ENST00000576148 KRT28Q7Z3Y7 464 aa11.44□□□□□ -0.58
RAB40B-210ENST00000576148 BTG4Q9NY30 223 aa11.44□□□□□ -0.58
RAB40B-210ENST00000576148 NRXN3Q9Y4C0 1643 aa11.44□□□□□ -0.58
RAB40B-210ENST00000576148 NWD2Q9ULI1 1742 aa11.43□□□□□ -0.58
RAB40B-210ENST00000576148 SLC34A2O95436 690 aa11.43□□□□□ -0.58
RAB40B-210ENST00000576148 HSPA6P17066 643 aa11.43□□□□□ -0.58
RAB40B-210ENST00000576148 CHD4Q14839 1912 aa11.43□□□□□ -0.58
RAB40B-210ENST00000576148 SPATA31A5Q5VU36 1347 aa11.42□□□□□ -0.58
RAB40B-210ENST00000576148 SPATA31A7Q8IWB4 1347 aa11.42□□□□□ -0.58
RAB40B-210ENST00000576148 ZBTB7AO95365 584 aa11.42□□□□□ -0.58
RAB40B-210ENST00000576148 PTGER2P43116 358 aa11.42□□□□□ -0.58
RAB40B-210ENST00000576148 NUTM2FA1L443 756 aa11.41□□□□□ -0.58
RAB40B-210ENST00000576148 PSME1Q06323 249 aa11.41□□□□□ -0.58
RAB40B-210ENST00000576148 GPR162Q16538 588 aa11.41□□□□□ -0.58
RAB40B-210ENST00000576148 LMOD2Q6P5Q4 547 aa11.41□□□□□ -0.58
RAB40B-210ENST00000576148 ATF5Q9Y2D1 282 aaPredicted RBP11.41□□□□□ -0.58
RAB40B-210ENST00000576148 NRKQ7Z2Y5 1582 aa11.41□□□□□ -0.58
RAB40B-210ENST00000576148 PLCH1Q4KWH8 1693 aa11.4□□□□□ -0.58
RAB40B-210ENST00000576148 HFM1A2PYH4 1435 aa11.4□□□□□ -0.58
RAB40B-210ENST00000576148 CCDC144AA2RUR9 1427 aa11.4□□□□□ -0.58
RAB40B-210ENST00000576148 DAPK1P53355 1430 aa11.4□□□□□ -0.58
RAB40B-210ENST00000576148 RREB1Q92766 1687 aa11.4□□□□□ -0.59
RAB40B-210ENST00000576148 PDE3BQ13370 1112 aa11.39□□□□□ -0.59
RAB40B-210ENST00000576148 NUP188Q5SRE5 1749 aa11.39□□□□□ -0.59
RAB40B-210ENST00000576148 PDGFDQ9GZP0 370 aaPredicted RBP11.38□□□□□ -0.59
RAB40B-210ENST00000576148 TNS3Q68CZ2 1445 aa11.37□□□□□ -0.59
RAB40B-210ENST00000576148 PRELPP51888 382 aa11.37□□□□□ -0.59
RAB40B-210ENST00000576148 PCDH10Q9P2E7 1040 aa11.36□□□□□ -0.59
RAB40B-210ENST00000576148 ARHGEF10O15013 1369 aa11.36□□□□□ -0.59
RAB40B-210ENST00000576148 CROCC2H7BZ55 1655 aa11.36□□□□□ -0.59
RAB40B-210ENST00000576148 DLC1Q96QB1 1528 aa11.35□□□□□ -0.59
RAB40B-210ENST00000576148 MYOM1P52179 1685 aa11.35□□□□□ -0.59
RAB40B-210ENST00000576148 NEXMIFQ5QGS0 1516 aa11.35□□□□□ -0.59
RAB40B-210ENST00000576148 ANKRD50Q9ULJ7 1429 aa11.35□□□□□ -0.59
RAB40B-210ENST00000576148 THSD7AQ9UPZ6 1657 aa11.34□□□□□ -0.59
RAB40B-210ENST00000576148 CDC42BPGQ6DT37 1551 aa11.34□□□□□ -0.59
RAB40B-210ENST00000576148 ARXQ96QS3 562 aa11.34□□□□□ -0.59
RAB40B-210ENST00000576148 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
RAB40B-210ENST00000576148 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
RAB40B-210ENST00000576148 IQGAP3Q86VI3 1631 aa11.34□□□□□ -0.59
RAB40B-210ENST00000576148 PRAG1Q86YV5 1406 aa11.34□□□□□ -0.59
RAB40B-210ENST00000576148 SPATA31A1Q5TZJ5 1347 aa11.34□□□□□ -0.59
RAB40B-210ENST00000576148 SBNO1A3KN83 1393 aa11.33□□□□□ -0.6
RAB40B-210ENST00000576148 COL13A1Q5TAT6 717 aaPredicted RBP11.33□□□□□ -0.6
RAB40B-210ENST00000576148 PELP1Q8IZL8 1130 aaKnown RBP11.33□□□□□ -0.6
RAB40B-210ENST00000576148 TNS4Q8IZW8 715 aa11.33□□□□□ -0.6
RAB40B-210ENST00000576148 MTFR1LQ9H019 292 aa11.33□□□□□ -0.6
RAB40B-210ENST00000576148 NAIPQ13075 1403 aa11.33□□□□□ -0.6
RAB40B-210ENST00000576148 RRBP1Q9P2E9 1410 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms