RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 TRAK1Q9UPV9 953 aa19.2■□□□□ 0.66
NDE1-209ENST00000574109 USP47Q96K76 1375 aa19.19■□□□□ 0.66
NDE1-209ENST00000574109 POGKQ9P215 609 aa19.18■□□□□ 0.66
NDE1-209ENST00000574109 CENPJQ9HC77 1338 aaPredicted RBP19.18■□□□□ 0.66
NDE1-209ENST00000574109 PRAM1Q96QH2 718 aa19.17■□□□□ 0.66
NDE1-209ENST00000574109 SLC24A1O60721 1099 aa19.16■□□□□ 0.66
NDE1-209ENST00000574109 C14orf37Q86TY3 774 aa19.16■□□□□ 0.66
NDE1-209ENST00000574109 PLEKHH1Q9ULM0 1364 aa19.15■□□□□ 0.66
NDE1-209ENST00000574109 CERKQ8TCT0 537 aa19.14■□□□□ 0.65
NDE1-209ENST00000574109 C19orf44Q9H6X5 657 aa19.13■□□□□ 0.65
NDE1-209ENST00000574109 TULP4Q9NRJ4 1543 aa19.13■□□□□ 0.65
NDE1-209ENST00000574109 KIF1AQ12756 1690 aa19.12■□□□□ 0.65
NDE1-209ENST00000574109 CADPS2Q86UW7 1296 aa19.12■□□□□ 0.65
NDE1-209ENST00000574109 TOPAZ1Q8N9V7 1692 aa19.11■□□□□ 0.65
NDE1-209ENST00000574109 ANKARQ7Z5J8 1434 aa19.11■□□□□ 0.65
NDE1-209ENST00000574109 WAPLQ7Z5K2 1190 aa19.11■□□□□ 0.65
NDE1-209ENST00000574109 ATF3P18847 181 aa19.09■□□□□ 0.65
NDE1-209ENST00000574109 EIF4G2P78344 907 aaKnown RBP eCLIP19.09■□□□□ 0.65
NDE1-209ENST00000574109 MST1RQ04912 1400 aa19.08■□□□□ 0.64
NDE1-209ENST00000574109 USP32Q8NFA0 1604 aa19.07■□□□□ 0.64
NDE1-209ENST00000574109 RGPD8O14715 1765 aaPredicted RBP19.07■□□□□ 0.64
NDE1-209ENST00000574109 TOM1O60784 492 aa19.06■□□□□ 0.64
NDE1-209ENST00000574109 SAFB2Q14151 953 aaKnown RBP eCLIP19.06■□□□□ 0.64
NDE1-209ENST00000574109 EVC2Q86UK5 1308 aa19.05■□□□□ 0.64
NDE1-209ENST00000574109 MINK1Q8N4C8 1332 aaPredicted RBP19.05■□□□□ 0.64
NDE1-209ENST00000574109 ROBO1Q9Y6N7 1651 aa19.05■□□□□ 0.64
NDE1-209ENST00000574109 ATP7BP35670 1465 aa19.05■□□□□ 0.64
NDE1-209ENST00000574109 RBM33Q96EV2 1170 aaKnown RBP19.04■□□□□ 0.64
NDE1-209ENST00000574109 NHSL1Q5SYE7 1610 aa19.03■□□□□ 0.64
NDE1-209ENST00000574109 C1orf167Q5SNV9 1468 aa19.03■□□□□ 0.64
NDE1-209ENST00000574109 ST20-MTHFSA0A0A6YYL1 179 aa19.03■□□□□ 0.64
NDE1-209ENST00000574109 WASLO00401 505 aaPredicted RBP19.03■□□□□ 0.64
NDE1-209ENST00000574109 ATAD2Q6PL18 1390 aa19.02■□□□□ 0.64
NDE1-209ENST00000574109 CDCA8Q53HL2 280 aa19.01■□□□□ 0.63
NDE1-209ENST00000574109 TMF1P82094 1093 aa19■□□□□ 0.63
NDE1-209ENST00000574109 PUS7Q96PZ0 661 aaKnown RBP19■□□□□ 0.63
NDE1-209ENST00000574109 TESK2Q96S53 571 aa19■□□□□ 0.63
NDE1-209ENST00000574109 HIRIP3Q9BW71 556 aaPredicted RBP19■□□□□ 0.63
NDE1-209ENST00000574109 NINLQ9Y2I6 1382 aa19■□□□□ 0.63
NDE1-209ENST00000574109 AHDC1Q5TGY3 1603 aaPredicted RBP19■□□□□ 0.63
NDE1-209ENST00000574109 UBAP1LF5GYI3 381 aa18.99■□□□□ 0.63
NDE1-209ENST00000574109 HSPA5P11021 654 aaKnown RBP18.99■□□□□ 0.63
NDE1-209ENST00000574109 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
NDE1-209ENST00000574109 MYOM1P52179 1685 aa18.98■□□□□ 0.63
NDE1-209ENST00000574109 SLAIN2Q9P270 581 aa18.97■□□□□ 0.63
NDE1-209ENST00000574109 SRPK2P78362 688 aaKnown RBP18.96■□□□□ 0.63
NDE1-209ENST00000574109 CDK19Q9BWU1 502 aa18.96■□□□□ 0.63
NDE1-209ENST00000574109 PHLPP1O60346 1717 aa18.95■□□□□ 0.62
NDE1-209ENST00000574109 DISP3Q9P2K9 1392 aa18.94■□□□□ 0.62
NDE1-209ENST00000574109 MON2Q7Z3U7 1717 aa18.94■□□□□ 0.62
NDE1-209ENST00000574109 PPIP5K1Q6PFW1 1433 aa18.92■□□□□ 0.62
NDE1-209ENST00000574109 CCDC61Q9Y6R9 512 aa18.92■□□□□ 0.62
NDE1-209ENST00000574109 NUDT16Q96DE0 195 aaKnown RBP18.91■□□□□ 0.62
NDE1-209ENST00000574109 PRR36Q9H6K5 1346 aa18.91■□□□□ 0.62
NDE1-209ENST00000574109 NRKQ7Z2Y5 1582 aa18.9■□□□□ 0.62
NDE1-209ENST00000574109 COL16A1Q07092 1604 aaPredicted RBP18.9■□□□□ 0.62
NDE1-209ENST00000574109 BRINP3Q76B58 766 aa18.9■□□□□ 0.62
NDE1-209ENST00000574109 FBXO41Q8TF61 875 aa18.9■□□□□ 0.62
NDE1-209ENST00000574109 NPHP3Q7Z494 1330 aa18.9■□□□□ 0.62
NDE1-209ENST00000574109 TRPM3Q9HCF6 1732 aaPredicted RBP18.89■□□□□ 0.61
NDE1-209ENST00000574109 POLR3AO14802 1390 aaPredicted RBP18.89■□□□□ 0.61
NDE1-209ENST00000574109 BRD4O60885 1362 aaPredicted RBP18.89■□□□□ 0.61
NDE1-209ENST00000574109 ESCO1Q5FWF5 840 aa18.88■□□□□ 0.61
NDE1-209ENST00000574109 CABP2Q9NPB3 220 aa18.88■□□□□ 0.61
NDE1-209ENST00000574109 PHF8Q9UPP1 1060 aa18.88■□□□□ 0.61
NDE1-209ENST00000574109 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
NDE1-209ENST00000574109 PXDNQ92626 1479 aa18.86■□□□□ 0.61
NDE1-209ENST00000574109 NUTM2FA1L443 756 aa18.86■□□□□ 0.61
NDE1-209ENST00000574109 PIP4K2BP78356 416 aa18.86■□□□□ 0.61
NDE1-209ENST00000574109 SHPRHQ149N8 1683 aa18.85■□□□□ 0.61
NDE1-209ENST00000574109 PLEKHG3A1L390 1219 aa18.85■□□□□ 0.61
NDE1-209ENST00000574109 ALS2Q96Q42 1657 aa18.85■□□□□ 0.61
NDE1-209ENST00000574109 ORAI2Q96SN7 254 aa18.84■□□□□ 0.61
NDE1-209ENST00000574109 ANKRD36BQ8N2N9 1353 aa18.83■□□□□ 0.61
NDE1-209ENST00000574109 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.6
NDE1-209ENST00000574109 USP54Q70EL1 1684 aa18.82■□□□□ 0.6
NDE1-209ENST00000574109 KIF20BQ96Q89 1820 aa18.82■□□□□ 0.6
NDE1-209ENST00000574109 USP6P35125 1406 aa18.82■□□□□ 0.6
NDE1-209ENST00000574109 COL22A1Q8NFW1 1626 aaPredicted RBP18.82■□□□□ 0.6
NDE1-209ENST00000574109 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
NDE1-209ENST00000574109 NGDNQ8NEJ9 315 aaKnown RBP18.81■□□□□ 0.6
NDE1-209ENST00000574109 TERF2IPQ9NYB0 399 aa18.81■□□□□ 0.6
NDE1-209ENST00000574109 CD163L1Q9NR16 1453 aa18.81■□□□□ 0.6
NDE1-209ENST00000574109 MED1Q15648 1581 aaPredicted RBP18.81■□□□□ 0.6
NDE1-209ENST00000574109 SBNO1A3KN83 1393 aa18.81■□□□□ 0.6
NDE1-209ENST00000574109 SOS2Q07890 1332 aaPredicted RBP18.8■□□□□ 0.6
NDE1-209ENST00000574109 KIF7Q2M1P5 1343 aa18.8■□□□□ 0.6
NDE1-209ENST00000574109 TNS3Q68CZ2 1445 aa18.8■□□□□ 0.6
NDE1-209ENST00000574109 EDC4Q6P2E9 1401 aaKnown RBP18.8■□□□□ 0.6
NDE1-209ENST00000574109 ACEP12821 1306 aa18.79■□□□□ 0.6
NDE1-209ENST00000574109 PSME1Q06323 249 aa18.79■□□□□ 0.6
NDE1-209ENST00000574109 HDGFL2Q7Z4V5 671 aaPredicted RBP18.79■□□□□ 0.6
NDE1-209ENST00000574109 ZNF692Q9BU19 519 aaPredicted RBP18.79■□□□□ 0.6
NDE1-209ENST00000574109 CABP1Q9NZU7 370 aa18.79■□□□□ 0.6
NDE1-209ENST00000574109 A0A1W2PP64 1363 aa18.79■□□□□ 0.6
NDE1-209ENST00000574109 ABCA3Q99758 1704 aa18.78■□□□□ 0.6
NDE1-209ENST00000574109 PMFBP1Q8TBY8 1022 aa18.78■□□□□ 0.6
NDE1-209ENST00000574109 TMC1Q8TDI8 760 aa18.78■□□□□ 0.6
NDE1-209ENST00000574109 ARHGEF10O15013 1369 aa18.78■□□□□ 0.6
NDE1-209ENST00000574109 ANKRD26Q9UPS8 1709 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms