RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 LAMC1P11047 1609 aa9.09□□□□□ -0.95
PRPF8-209ENST00000573725 FANCIQ9NVI1 1328 aa9.08□□□□□ -0.96
PRPF8-209ENST00000573725 NAIPQ13075 1403 aa9.08□□□□□ -0.96
PRPF8-209ENST00000573725 RRBP1Q9P2E9 1410 aaKnown RBP9.08□□□□□ -0.96
PRPF8-209ENST00000573725 ZNF326Q5BKZ1 582 aaKnown RBP9.08□□□□□ -0.96
PRPF8-209ENST00000573725 PODXL2Q9NZ53 605 aa9.08□□□□□ -0.96
PRPF8-209ENST00000573725 ADGRL3Q9HAR2 1447 aa9.07□□□□□ -0.96
PRPF8-209ENST00000573725 IFT172Q9UG01 1749 aa9.07□□□□□ -0.96
PRPF8-209ENST00000573725 MARF1Q9Y4F3 1742 aaKnown RBP9.07□□□□□ -0.96
PRPF8-209ENST00000573725 SETD5Q9C0A6 1442 aa9.06□□□□□ -0.96
PRPF8-209ENST00000573725 MEX3CQ5U5Q3 659 aaKnown RBP9.06□□□□□ -0.96
PRPF8-209ENST00000573725 RGPD8O14715 1765 aaPredicted RBP9.05□□□□□ -0.96
PRPF8-209ENST00000573725 NUTM2BA6NNL0 878 aaPredicted RBP9.05□□□□□ -0.96
PRPF8-209ENST00000573725 NUTM2EB1AL46 878 aaPredicted RBP9.05□□□□□ -0.96
PRPF8-209ENST00000573725 ZNF772Q68DY9 489 aaPredicted RBP9.05□□□□□ -0.96
PRPF8-209ENST00000573725 PPP4R3CPQ6ZMV5 832 aa9.05□□□□□ -0.96
PRPF8-209ENST00000573725 NUTM2AQ8IVF1 878 aaPredicted RBP9.05□□□□□ -0.96
PRPF8-209ENST00000573725 DDX17Q92841 729 aaKnown RBP9.05□□□□□ -0.96
PRPF8-209ENST00000573725 TRIM52Q96A61 297 aa9.04□□□□□ -0.96
PRPF8-209ENST00000573725 PTCH1Q13635 1447 aa9.04□□□□□ -0.96
PRPF8-209ENST00000573725 C1orf167Q5SNV9 1468 aa9.03□□□□□ -0.96
PRPF8-209ENST00000573725 PNPLA6Q8IY17 1366 aa9.03□□□□□ -0.96
PRPF8-209ENST00000573725 ROBO2Q9HCK4 1378 aa9.03□□□□□ -0.96
PRPF8-209ENST00000573725 HFM1A2PYH4 1435 aa9.03□□□□□ -0.96
PRPF8-209ENST00000573725 AFF2P51816 1311 aa9.03□□□□□ -0.96
PRPF8-209ENST00000573725 CDK12Q9NYV4 1490 aaPredicted RBP9.02□□□□□ -0.96
PRPF8-209ENST00000573725 COL22A1Q8NFW1 1626 aaPredicted RBP9.02□□□□□ -0.96
PRPF8-209ENST00000573725 RXRBP28702 533 aa9.02□□□□□ -0.97
PRPF8-209ENST00000573725 UPF1Q92900 1129 aaKnown RBP eCLIP9.02□□□□□ -0.97
PRPF8-209ENST00000573725 LRRC59Q96AG4 307 aaKnown RBP9.02□□□□□ -0.97
PRPF8-209ENST00000573725 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.02□□□□□ -0.97
PRPF8-209ENST00000573725 PRAG1Q86YV5 1406 aa9.02□□□□□ -0.97
PRPF8-209ENST00000573725 KNDC1Q76NI1 1749 aa9.02□□□□□ -0.97
PRPF8-209ENST00000573725 VGFO15240 615 aaPredicted RBP9□□□□□ -0.97
PRPF8-209ENST00000573725 RPGRIP1LQ68CZ1 1315 aa9□□□□□ -0.97
PRPF8-209ENST00000573725 CDC42BPGQ6DT37 1551 aa8.99□□□□□ -0.97
PRPF8-209ENST00000573725 C8orf37Q96NL8 207 aa8.99□□□□□ -0.97
PRPF8-209ENST00000573725 ORAI2Q96SN7 254 aa8.99□□□□□ -0.97
PRPF8-209ENST00000573725 SLC4A1APQ9BWU0 796 aaKnown RBP8.99□□□□□ -0.97
PRPF8-209ENST00000573725 FMN2Q9NZ56 1722 aa8.99□□□□□ -0.97
PRPF8-209ENST00000573725 SOS2Q07890 1332 aaPredicted RBP8.99□□□□□ -0.97
PRPF8-209ENST00000573725 RGS12O14924 1447 aa8.98□□□□□ -0.97
PRPF8-209ENST00000573725 QTRT2Q9H974 415 aaKnown RBP8.98□□□□□ -0.97
PRPF8-209ENST00000573725 BRWD3Q6RI45 1802 aa8.98□□□□□ -0.97
PRPF8-209ENST00000573725 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.97□□□□□ -0.97
PRPF8-209ENST00000573725 PXDNQ92626 1479 aa8.97□□□□□ -0.97
PRPF8-209ENST00000573725 EP400Q96L91 3159 aa8.97□□□□□ -0.97
PRPF8-209ENST00000573725 ADAMTS2O95450 1211 aa8.97□□□□□ -0.97
PRPF8-209ENST00000573725 KCNA4P22459 653 aa8.97□□□□□ -0.97
PRPF8-209ENST00000573725 SPATA31E1Q6ZUB1 1445 aa8.97□□□□□ -0.97
PRPF8-209ENST00000573725 RBM6P78332 1123 aaKnown RBP8.96□□□□□ -0.98
PRPF8-209ENST00000573725 ADGRF5Q8IZF2 1346 aa8.96□□□□□ -0.98
PRPF8-209ENST00000573725 TECPR2O15040 1411 aa8.96□□□□□ -0.98
PRPF8-209ENST00000573725 KIF1AQ12756 1690 aa8.95□□□□□ -0.98
PRPF8-209ENST00000573725 NGLY1Q96IV0 654 aa8.95□□□□□ -0.98
PRPF8-209ENST00000573725 CCDC144AA2RUR9 1427 aa8.95□□□□□ -0.98
PRPF8-209ENST00000573725 MYOM2P54296 1465 aa8.95□□□□□ -0.98
PRPF8-209ENST00000573725 ABCA3Q99758 1704 aa8.94□□□□□ -0.98
PRPF8-209ENST00000573725 XPCQ01831 940 aaPredicted RBP8.93□□□□□ -0.98
PRPF8-209ENST00000573725 RGL3Q3MIN7 710 aa8.93□□□□□ -0.98
PRPF8-209ENST00000573725 ESCO1Q5FWF5 840 aa8.93□□□□□ -0.98
PRPF8-209ENST00000573725 WAPLQ7Z5K2 1190 aa8.93□□□□□ -0.98
PRPF8-209ENST00000573725 FNBP4Q8N3X1 1017 aaPredicted RBP8.93□□□□□ -0.98
PRPF8-209ENST00000573725 IL27Q8NEV9 243 aa8.93□□□□□ -0.98
PRPF8-209ENST00000573725 USP21Q9UK80 565 aa8.93□□□□□ -0.98
PRPF8-209ENST00000573725 LRPPRCP42704 1394 aaKnown RBP8.93□□□□□ -0.98
PRPF8-209ENST00000573725 PLEKHH1Q9ULM0 1364 aa8.93□□□□□ -0.98
PRPF8-209ENST00000573725 PIK3C2GO75747 1445 aa8.93□□□□□ -0.98
PRPF8-209ENST00000573725 ATRNO75882 1429 aa8.93□□□□□ -0.98
PRPF8-209ENST00000573725 PLCH1Q4KWH8 1693 aa8.92□□□□□ -0.98
PRPF8-209ENST00000573725 BCL9LQ86UU0 1499 aa8.92□□□□□ -0.98
PRPF8-209ENST00000573725 ABCC11Q96J66 1382 aa8.92□□□□□ -0.98
PRPF8-209ENST00000573725 ANKRD30BQ9BXX2 1392 aa8.92□□□□□ -0.98
PRPF8-209ENST00000573725 NPHP3Q7Z494 1330 aa8.92□□□□□ -0.98
PRPF8-209ENST00000573725 FOXO3O43524 673 aa8.92□□□□□ -0.98
PRPF8-209ENST00000573725 TMEM132EQ6IEE7 984 aa8.92□□□□□ -0.98
PRPF8-209ENST00000573725 MPHOSPH9Q99550 1183 aa8.92□□□□□ -0.98
PRPF8-209ENST00000573725 STK26Q9P289 416 aa8.92□□□□□ -0.98
PRPF8-209ENST00000573725 USP32Q8NFA0 1604 aa8.91□□□□□ -0.98
PRPF8-209ENST00000573725 YTHDC2Q9H6S0 1430 aaKnown RBP8.91□□□□□ -0.98
PRPF8-209ENST00000573725 NUTM2FA1L443 756 aa8.91□□□□□ -0.98
PRPF8-209ENST00000573725 TRPC5Q9UL62 973 aaPredicted RBP8.91□□□□□ -0.98
PRPF8-209ENST00000573725 NWD2Q9ULI1 1742 aa8.91□□□□□ -0.98
PRPF8-209ENST00000573725 GLI3P10071 1580 aa8.9□□□□□ -0.98
PRPF8-209ENST00000573725 NRXN1Q9ULB1 1477 aa8.9□□□□□ -0.98
PRPF8-209ENST00000573725 SRCAPQ6ZRS2 3230 aa8.9□□□□□ -0.98
PRPF8-209ENST00000573725 ATAD2Q6PL18 1390 aa8.89□□□□□ -0.99
PRPF8-209ENST00000573725 TRPM3Q9HCF6 1732 aaPredicted RBP8.89□□□□□ -0.99
PRPF8-209ENST00000573725 FKBP8Q14318 412 aa8.89□□□□□ -0.99
PRPF8-209ENST00000573725 SLIT2O94813 1529 aa8.88□□□□□ -0.99
PRPF8-209ENST00000573725 CRYBG1Q9Y4K1 1723 aa8.88□□□□□ -0.99
PRPF8-209ENST00000573725 ALS2Q96Q42 1657 aa8.88□□□□□ -0.99
PRPF8-209ENST00000573725 SPATA31A3Q5VYP0 1347 aa8.87□□□□□ -0.99
PRPF8-209ENST00000573725 NEFLP07196 543 aa8.87□□□□□ -0.99
PRPF8-209ENST00000573725 C14orf93Q9H972 538 aaKnown RBP8.87□□□□□ -0.99
PRPF8-209ENST00000573725 NRAPQ86VF7 1730 aa8.87□□□□□ -0.99
PRPF8-209ENST00000573725 ADGRB2O60241 1585 aa8.86□□□□□ -0.99
PRPF8-209ENST00000573725 ARHGEF28Q8N1W1 1705 aaKnown RBP8.86□□□□□ -0.99
PRPF8-209ENST00000573725 RALGAPBQ86X10 1494 aa8.86□□□□□ -0.99
PRPF8-209ENST00000573725 CFAP70Q5T0N1 1121 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms