RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 E9PSI1 815 aa13.29□□□□□ -0.28
CHRNB1-205ENST00000573209 PHF14O94880 888 aa13.29□□□□□ -0.28
CHRNB1-205ENST00000573209 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
CHRNB1-205ENST00000573209 CLSTN1O94985 981 aa13.28□□□□□ -0.28
CHRNB1-205ENST00000573209 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
CHRNB1-205ENST00000573209 PRAG1Q86YV5 1406 aa13.28□□□□□ -0.28
CHRNB1-205ENST00000573209 INSRP06213 1382 aa13.28□□□□□ -0.28
CHRNB1-205ENST00000573209 RNF17Q9BXT8 1623 aaKnown RBP13.27□□□□□ -0.28
CHRNB1-205ENST00000573209 GPRASP1Q5JY77 1395 aa13.27□□□□□ -0.29
CHRNB1-205ENST00000573209 HMGB1P09429 215 aaKnown RBP13.27□□□□□ -0.29
CHRNB1-205ENST00000573209 PANK2Q9BZ23 570 aa13.27□□□□□ -0.29
CHRNB1-205ENST00000573209 GEMIN8Q9NWZ8 242 aaKnown RBP13.27□□□□□ -0.29
CHRNB1-205ENST00000573209 COL17A1Q9UMD9 1497 aaPredicted RBP13.26□□□□□ -0.29
CHRNB1-205ENST00000573209 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
CHRNB1-205ENST00000573209 TMED8Q6PL24 325 aaPredicted RBP13.26□□□□□ -0.29
CHRNB1-205ENST00000573209 PLCD4Q9BRC7 762 aa13.26□□□□□ -0.29
CHRNB1-205ENST00000573209 CCDC144AA2RUR9 1427 aa13.25□□□□□ -0.29
CHRNB1-205ENST00000573209 ST20-MTHFSA0A0A6YYL1 179 aa13.25□□□□□ -0.29
CHRNB1-205ENST00000573209 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
CHRNB1-205ENST00000573209 IRX5P78411 483 aaPredicted RBP13.24□□□□□ -0.29
CHRNB1-205ENST00000573209 SYCP2Q9BX26 1530 aa13.24□□□□□ -0.29
CHRNB1-205ENST00000573209 SOX12O15370 315 aa13.24□□□□□ -0.29
CHRNB1-205ENST00000573209 CGNQ9P2M7 1197 aaKnown RBP13.24□□□□□ -0.29
CHRNB1-205ENST00000573209 TTC37Q6PGP7 1564 aa13.23□□□□□ -0.29
CHRNB1-205ENST00000573209 MAGI2Q86UL8 1455 aa13.23□□□□□ -0.29
CHRNB1-205ENST00000573209 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
CHRNB1-205ENST00000573209 SLC4A3P48751 1232 aa13.23□□□□□ -0.29
CHRNB1-205ENST00000573209 PDE3BQ13370 1112 aa13.23□□□□□ -0.29
CHRNB1-205ENST00000573209 NLRP13Q86W25 1043 aa13.23□□□□□ -0.29
CHRNB1-205ENST00000573209 ATP10AO60312 1499 aa13.22□□□□□ -0.29
CHRNB1-205ENST00000573209 A2MP01023 1474 aa13.22□□□□□ -0.29
CHRNB1-205ENST00000573209 ZBTB22O15209 634 aa13.21□□□□□ -0.29
CHRNB1-205ENST00000573209 UQCRHLA0A096LP55 91 aa13.21□□□□□ -0.3
CHRNB1-205ENST00000573209 UQCRHP07919 91 aa13.21□□□□□ -0.3
CHRNB1-205ENST00000573209 RRP1P56182 461 aaKnown RBP13.21□□□□□ -0.3
CHRNB1-205ENST00000573209 CEP120Q8N960 986 aa13.21□□□□□ -0.3
CHRNB1-205ENST00000573209 DUOX2Q9NRD8 1548 aa13.2□□□□□ -0.3
CHRNB1-205ENST00000573209 ARHGAP5Q13017 1502 aa13.2□□□□□ -0.3
CHRNB1-205ENST00000573209 BLMP54132 1417 aaPredicted RBP13.2□□□□□ -0.3
CHRNB1-205ENST00000573209 HNRNPMP52272 730 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHRNB1-205ENST00000573209 AEBP1Q8IUX7 1158 aa13.2□□□□□ -0.3
CHRNB1-205ENST00000573209 KDM2AQ9Y2K7 1162 aa13.2□□□□□ -0.3
CHRNB1-205ENST00000573209 IQGAP1P46940 1657 aa13.2□□□□□ -0.3
CHRNB1-205ENST00000573209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHRNB1-205ENST00000573209 NGEFQ8N5V2 710 aa13.19□□□□□ -0.3
CHRNB1-205ENST00000573209 PLA2R1Q13018 1463 aa13.19□□□□□ -0.3
CHRNB1-205ENST00000573209 TSPYL1Q9H0U9 437 aa13.18□□□□□ -0.3
CHRNB1-205ENST00000573209 FAM43BQ6ZT52 329 aaPredicted RBP13.18□□□□□ -0.3
CHRNB1-205ENST00000573209 ZSCAN30Q86W11 494 aa13.18□□□□□ -0.3
CHRNB1-205ENST00000573209 CARD10Q9BWT7 1032 aa13.18□□□□□ -0.3
CHRNB1-205ENST00000573209 ERBINQ96RT1 1412 aa13.18□□□□□ -0.3
CHRNB1-205ENST00000573209 CERS3Q8IU89 383 aa13.17□□□□□ -0.3
CHRNB1-205ENST00000573209 CEP152O94986 1710 aa13.17□□□□□ -0.3
CHRNB1-205ENST00000573209 SPHKAPQ2M3C7 1700 aa13.17□□□□□ -0.3
CHRNB1-205ENST00000573209 GRPEL1Q9HAV7 217 aa13.17□□□□□ -0.3
CHRNB1-205ENST00000573209 RCAN3Q9UKA8 241 aa13.17□□□□□ -0.3
CHRNB1-205ENST00000573209 R3HCC1Q9Y3T6 440 aaKnown RBP13.16□□□□□ -0.3
CHRNB1-205ENST00000573209 MSNP26038 577 aaKnown RBP13.15□□□□□ -0.3
CHRNB1-205ENST00000573209 ZNF592Q92610 1267 aa13.15□□□□□ -0.3
CHRNB1-205ENST00000573209 MADDQ8WXG6 1647 aa13.15□□□□□ -0.3
CHRNB1-205ENST00000573209 PER1O15534 1290 aaPredicted RBP13.15□□□□□ -0.3
CHRNB1-205ENST00000573209 ABCC2Q92887 1545 aa13.15□□□□□ -0.3
CHRNB1-205ENST00000573209 SYNMO15061 1565 aa13.14□□□□□ -0.31
CHRNB1-205ENST00000573209 DISP3Q9P2K9 1392 aa13.13□□□□□ -0.31
CHRNB1-205ENST00000573209 CCDC66A2RUB6 948 aa13.13□□□□□ -0.31
CHRNB1-205ENST00000573209 KCNJ4P48050 445 aa13.13□□□□□ -0.31
CHRNB1-205ENST00000573209 NBPF20Q3BBV1 942 aa13.13□□□□□ -0.31
CHRNB1-205ENST00000573209 EGFL6Q8IUX8 553 aa13.13□□□□□ -0.31
CHRNB1-205ENST00000573209 KIAA1210Q9ULL0 1709 aa13.12□□□□□ -0.31
CHRNB1-205ENST00000573209 BECN1Q14457 450 aa13.12□□□□□ -0.31
CHRNB1-205ENST00000573209 TESK2Q96S53 571 aa13.12□□□□□ -0.31
CHRNB1-205ENST00000573209 ABCC1P33527 1531 aa13.11□□□□□ -0.31
CHRNB1-205ENST00000573209 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
CHRNB1-205ENST00000573209 EFCC1Q9HA90 598 aa13.11□□□□□ -0.31
CHRNB1-205ENST00000573209 CCDC173Q0VFZ6 552 aa13.1□□□□□ -0.31
CHRNB1-205ENST00000573209 DEPDC5O75140 1603 aa13.1□□□□□ -0.31
CHRNB1-205ENST00000573209 IGSF3O75054 1194 aa13.1□□□□□ -0.31
CHRNB1-205ENST00000573209 TMF1P82094 1093 aa13.1□□□□□ -0.31
CHRNB1-205ENST00000573209 SASS6Q6UVJ0 657 aa13.1□□□□□ -0.31
CHRNB1-205ENST00000573209 EXOC6Q8TAG9 804 aa13.1□□□□□ -0.31
CHRNB1-205ENST00000573209 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
CHRNB1-205ENST00000573209 TRPM2O94759 1503 aa13.1□□□□□ -0.31
CHRNB1-205ENST00000573209 MYOM1P52179 1685 aa13.1□□□□□ -0.31
CHRNB1-205ENST00000573209 CBX1P83916 185 aa13.09□□□□□ -0.31
CHRNB1-205ENST00000573209 NBPF1Q3BBV0 1214 aa13.09□□□□□ -0.31
CHRNB1-205ENST00000573209 ZCCHC11Q5TAX3 1644 aaKnown RBP13.09□□□□□ -0.31
CHRNB1-205ENST00000573209 NEURL4Q96JN8 1562 aa13.08□□□□□ -0.32
CHRNB1-205ENST00000573209 TIGD1Q96MW7 591 aa13.08□□□□□ -0.32
CHRNB1-205ENST00000573209 TET3O43151 1660 aa13.08□□□□□ -0.32
CHRNB1-205ENST00000573209 KDM5AP29375 1690 aaKnown RBP13.07□□□□□ -0.32
CHRNB1-205ENST00000573209 SETQ01105 290 aaPredicted RBP13.07□□□□□ -0.32
CHRNB1-205ENST00000573209 ZNF771Q7L3S4 317 aaPredicted RBP13.07□□□□□ -0.32
CHRNB1-205ENST00000573209 ARAP3Q8WWN8 1544 aa13.07□□□□□ -0.32
CHRNB1-205ENST00000573209 WDR7Q9Y4E6 1490 aa13.07□□□□□ -0.32
CHRNB1-205ENST00000573209 ZNF500O60304 480 aaPredicted RBP13.07□□□□□ -0.32
CHRNB1-205ENST00000573209 KIF3AQ9Y496 699 aa13.07□□□□□ -0.32
CHRNB1-205ENST00000573209 TULP2O00295 520 aa13.06□□□□□ -0.32
CHRNB1-205ENST00000573209 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
CHRNB1-205ENST00000573209 LMOD3Q0VAK6 560 aa13.06□□□□□ -0.32
CHRNB1-205ENST00000573209 HS1BP3Q53T59 392 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms