RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 ROBO1Q9Y6N7 1651 aa9.71□□□□□ -0.85
PRPF8-204ENST00000572445 PPP1R37O75864 691 aa9.71□□□□□ -0.86
PRPF8-204ENST00000572445 PPARGC1BQ86YN6 1023 aaKnown RBP9.71□□□□□ -0.86
PRPF8-204ENST00000572445 SLC26A8Q96RN1 970 aa9.71□□□□□ -0.86
PRPF8-204ENST00000572445 ANKRD30AQ9BXX3 1397 aa9.71□□□□□ -0.86
PRPF8-204ENST00000572445 SLIT1O75093 1534 aa9.71□□□□□ -0.86
PRPF8-204ENST00000572445 ITGAEP38570 1179 aa9.7□□□□□ -0.86
PRPF8-204ENST00000572445 NUTM2DQ5VT03 806 aaPredicted RBP9.7□□□□□ -0.86
PRPF8-204ENST00000572445 EID1Q9Y6B2 187 aa9.7□□□□□ -0.86
PRPF8-204ENST00000572445 ARHGAP23Q9P227 1491 aa9.7□□□□□ -0.86
PRPF8-204ENST00000572445 TET3O43151 1660 aa9.68□□□□□ -0.86
PRPF8-204ENST00000572445 TMEM94Q12767 1356 aa9.68□□□□□ -0.86
PRPF8-204ENST00000572445 TMEM2Q9UHN6 1383 aa9.68□□□□□ -0.86
PRPF8-204ENST00000572445 ZMYND10O75800 440 aa9.68□□□□□ -0.86
PRPF8-204ENST00000572445 PPP1R15AO75807 674 aaPredicted RBP9.68□□□□□ -0.86
PRPF8-204ENST00000572445 E2F4Q16254 413 aa9.68□□□□□ -0.86
PRPF8-204ENST00000572445 PHLPP1O60346 1717 aa9.68□□□□□ -0.86
PRPF8-204ENST00000572445 PDAP1Q13442 181 aaKnown RBP9.67□□□□□ -0.86
PRPF8-204ENST00000572445 PCDHB8Q9UN66 801 aa9.67□□□□□ -0.86
PRPF8-204ENST00000572445 PCDHB13Q9Y5F0 798 aa9.67□□□□□ -0.86
PRPF8-204ENST00000572445 ARHGAP31Q2M1Z3 1444 aa9.66□□□□□ -0.86
PRPF8-204ENST00000572445 IDI1Q13907 227 aa9.66□□□□□ -0.86
PRPF8-204ENST00000572445 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
PRPF8-204ENST00000572445 E9PCH4 1651 aa9.66□□□□□ -0.86
PRPF8-204ENST00000572445 KDM5AP29375 1690 aaKnown RBP9.65□□□□□ -0.86
PRPF8-204ENST00000572445 PROSER2Q86WR7 435 aaPredicted RBP9.65□□□□□ -0.86
PRPF8-204ENST00000572445 AKT1S1Q96B36 256 aa9.65□□□□□ -0.86
PRPF8-204ENST00000572445 LMTK2Q8IWU2 1503 aa9.65□□□□□ -0.86
PRPF8-204ENST00000572445 ANKRD50Q9ULJ7 1429 aa9.65□□□□□ -0.87
PRPF8-204ENST00000572445 UNC13BO14795 1591 aa9.64□□□□□ -0.87
PRPF8-204ENST00000572445 NWD1Q149M9 1564 aa9.64□□□□□ -0.87
PRPF8-204ENST00000572445 RIMS2Q9UQ26 1411 aa9.64□□□□□ -0.87
PRPF8-204ENST00000572445 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
PRPF8-204ENST00000572445 TSPYL2Q9H2G4 693 aaPredicted RBP9.63□□□□□ -0.87
PRPF8-204ENST00000572445 ADGRL2O95490 1459 aa9.63□□□□□ -0.87
PRPF8-204ENST00000572445 TMEM131LA2VDJ0 1609 aa9.63□□□□□ -0.87
PRPF8-204ENST00000572445 CHD2O14647 1828 aaKnown RBP9.63□□□□□ -0.87
PRPF8-204ENST00000572445 PODXL2Q9NZ53 605 aa9.62□□□□□ -0.87
PRPF8-204ENST00000572445 NOS1P29475 1434 aa9.62□□□□□ -0.87
PRPF8-204ENST00000572445 MSH6P52701 1360 aa9.62□□□□□ -0.87
PRPF8-204ENST00000572445 NKTRP30414 1462 aaKnown RBP9.61□□□□□ -0.87
PRPF8-204ENST00000572445 PSEN1P49768 467 aa9.61□□□□□ -0.87
PRPF8-204ENST00000572445 FBXO22Q8NEZ5 403 aa9.61□□□□□ -0.87
PRPF8-204ENST00000572445 GPBP1L1Q9HC44 474 aaPredicted RBP9.61□□□□□ -0.87
PRPF8-204ENST00000572445 IQGAP3Q86VI3 1631 aa9.6□□□□□ -0.87
PRPF8-204ENST00000572445 SPHKAPQ2M3C7 1700 aa9.6□□□□□ -0.87
PRPF8-204ENST00000572445 ZFYVE9O95405 1425 aa9.59□□□□□ -0.87
PRPF8-204ENST00000572445 KCNA6P17658 529 aa9.59□□□□□ -0.87
PRPF8-204ENST00000572445 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.59□□□□□ -0.87
PRPF8-204ENST00000572445 MEX3CQ5U5Q3 659 aaKnown RBP9.58□□□□□ -0.88
PRPF8-204ENST00000572445 BARGINQ6ZT62 677 aa9.58□□□□□ -0.88
PRPF8-204ENST00000572445 RGS17Q9UGC6 210 aaPredicted RBP9.58□□□□□ -0.88
PRPF8-204ENST00000572445 RPRD2Q5VT52 1461 aaKnown RBP9.58□□□□□ -0.88
PRPF8-204ENST00000572445 COL16A1Q07092 1604 aaPredicted RBP9.57□□□□□ -0.88
PRPF8-204ENST00000572445 POTEAQ6S8J7 498 aa9.57□□□□□ -0.88
PRPF8-204ENST00000572445 PHF8Q9UPP1 1060 aa9.57□□□□□ -0.88
PRPF8-204ENST00000572445 PLEKHG1Q9ULL1 1385 aa9.57□□□□□ -0.88
PRPF8-204ENST00000572445 NUP155O75694 1391 aa9.56□□□□□ -0.88
PRPF8-204ENST00000572445 EFCAB3Q8N7B9 438 aa9.56□□□□□ -0.88
PRPF8-204ENST00000572445 LRP6O75581 1613 aa9.56□□□□□ -0.88
PRPF8-204ENST00000572445 FAM135BQ49AJ0 1406 aa9.56□□□□□ -0.88
PRPF8-204ENST00000572445 NUTM2BA6NNL0 878 aaPredicted RBP9.55□□□□□ -0.88
PRPF8-204ENST00000572445 NUTM2EB1AL46 878 aaPredicted RBP9.55□□□□□ -0.88
PRPF8-204ENST00000572445 ZNF326Q5BKZ1 582 aaKnown RBP9.55□□□□□ -0.88
PRPF8-204ENST00000572445 NUTM2AQ8IVF1 878 aaPredicted RBP9.55□□□□□ -0.88
PRPF8-204ENST00000572445 CLTCL1P53675 1640 aa9.55□□□□□ -0.88
PRPF8-204ENST00000572445 NRXN3Q9Y4C0 1643 aa9.55□□□□□ -0.88
PRPF8-204ENST00000572445 TRPM2O94759 1503 aa9.55□□□□□ -0.88
PRPF8-204ENST00000572445 DIP2AQ14689 1571 aa9.54□□□□□ -0.88
PRPF8-204ENST00000572445 PITPNM1O00562 1244 aa9.54□□□□□ -0.88
PRPF8-204ENST00000572445 TRIM52Q96A61 297 aa9.54□□□□□ -0.88
PRPF8-204ENST00000572445 SLC52A1Q9NWF4 448 aa9.54□□□□□ -0.88
PRPF8-204ENST00000572445 ADAMTS13Q76LX8 1427 aa9.54□□□□□ -0.88
PRPF8-204ENST00000572445 KIF1BO60333 1816 aa9.54□□□□□ -0.88
PRPF8-204ENST00000572445 NALCNQ8IZF0 1738 aa9.53□□□□□ -0.88
PRPF8-204ENST00000572445 CHADLQ6NUI6 762 aa9.53□□□□□ -0.88
PRPF8-204ENST00000572445 ZNF579Q8NAF0 562 aaKnown RBP9.53□□□□□ -0.88
PRPF8-204ENST00000572445 RBM42Q9BTD8 480 aaKnown RBP9.53□□□□□ -0.88
PRPF8-204ENST00000572445 SLAIN2Q9P270 581 aa9.53□□□□□ -0.88
PRPF8-204ENST00000572445 XRN1Q8IZH2 1706 aaKnown RBP9.53□□□□□ -0.88
PRPF8-204ENST00000572445 JCADQ9P266 1359 aa9.52□□□□□ -0.88
PRPF8-204ENST00000572445 NLRP6P59044 892 aa9.52□□□□□ -0.89
PRPF8-204ENST00000572445 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
PRPF8-204ENST00000572445 PTPRUQ92729 1446 aa9.52□□□□□ -0.89
PRPF8-204ENST00000572445 LARP6Q9BRS8 491 aaKnown RBP9.52□□□□□ -0.89
PRPF8-204ENST00000572445 CCDC61Q9Y6R9 512 aa9.52□□□□□ -0.89
PRPF8-204ENST00000572445 SHPRHQ149N8 1683 aa9.51□□□□□ -0.89
PRPF8-204ENST00000572445 ATF3P18847 181 aa9.51□□□□□ -0.89
PRPF8-204ENST00000572445 MFSD10Q14728 455 aa9.51□□□□□ -0.89
PRPF8-204ENST00000572445 RBM26Q5T8P6 1007 aaKnown RBP9.51□□□□□ -0.89
PRPF8-204ENST00000572445 DDX17Q92841 729 aaKnown RBP9.51□□□□□ -0.89
PRPF8-204ENST00000572445 ZMYND15Q9H091 742 aa9.51□□□□□ -0.89
PRPF8-204ENST00000572445 ASXL1Q8IXJ9 1541 aa9.51□□□□□ -0.89
PRPF8-204ENST00000572445 AHDC1Q5TGY3 1603 aaPredicted RBP9.5□□□□□ -0.89
PRPF8-204ENST00000572445 TRIM26Q12899 539 aaPredicted RBP9.5□□□□□ -0.89
PRPF8-204ENST00000572445 SMYD5Q6GMV2 418 aa9.5□□□□□ -0.89
PRPF8-204ENST00000572445 POTEDQ86YR6 584 aa9.5□□□□□ -0.89
PRPF8-204ENST00000572445 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.5□□□□□ -0.89
PRPF8-204ENST00000572445 AK7Q96M32 723 aa9.5□□□□□ -0.89
PRPF8-204ENST00000572445 CABP2Q9NPB3 220 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms