RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 LTKP29376 864 aa26.32■■□□□ 1.8
RPAIN-210ENST00000571613 CC2D1BQ5T0F9 858 aaKnown RBP26.32■■□□□ 1.8
RPAIN-210ENST00000571613 METP08581 1390 aa26.31■■□□□ 1.8
RPAIN-210ENST00000571613 ADAMTS13Q76LX8 1427 aa26.3■■□□□ 1.8
RPAIN-210ENST00000571613 CEP170BQ9Y4F5 1589 aaPredicted RBP26.3■■□□□ 1.8
RPAIN-210ENST00000571613 SAFB2Q14151 953 aaKnown RBP eCLIP26.3■■□□□ 1.8
RPAIN-210ENST00000571613 FAM9BQ8IZU0 186 aa26.29■■□□□ 1.8
RPAIN-210ENST00000571613 KNDC1Q76NI1 1749 aa26.29■■□□□ 1.8
RPAIN-210ENST00000571613 SRPK2P78362 688 aaKnown RBP26.28■■□□□ 1.8
RPAIN-210ENST00000571613 SETD1BQ9UPS6 1966 aaKnown RBP26.27■■□□□ 1.8
RPAIN-210ENST00000571613 TBX22Q9Y458 520 aa26.27■■□□□ 1.8
RPAIN-210ENST00000571613 MED14O60244 1454 aa26.27■■□□□ 1.8
RPAIN-210ENST00000571613 MINK1Q8N4C8 1332 aaPredicted RBP26.27■■□□□ 1.8
RPAIN-210ENST00000571613 HNRNPUQ00839 825 aaKnown RBP eCLIP26.26■■□□□ 1.79
RPAIN-210ENST00000571613 PNISRQ8TF01 805 aaKnown RBP26.25■■□□□ 1.79
RPAIN-210ENST00000571613 SLC12A5Q9H2X9 1139 aa26.25■■□□□ 1.79
RPAIN-210ENST00000571613 DIP2AQ14689 1571 aa26.25■■□□□ 1.79
RPAIN-210ENST00000571613 ANKRD36BQ8N2N9 1353 aa26.25■■□□□ 1.79
RPAIN-210ENST00000571613 CABP2Q9NPB3 220 aa26.25■■□□□ 1.79
RPAIN-210ENST00000571613 CPS1P31327 1500 aa26.25■■□□□ 1.79
RPAIN-210ENST00000571613 CARD14Q9BXL6 1004 aa26.23■■□□□ 1.79
RPAIN-210ENST00000571613 ZNF142P52746 1687 aaPredicted RBP26.22■■□□□ 1.79
RPAIN-210ENST00000571613 CDK19Q9BWU1 502 aa26.22■■□□□ 1.79
RPAIN-210ENST00000571613 WAPLQ7Z5K2 1190 aa26.21■■□□□ 1.79
RPAIN-210ENST00000571613 TERF2IPQ9NYB0 399 aa26.19■■□□□ 1.78
RPAIN-210ENST00000571613 NSD3Q9BZ95 1437 aa26.19■■□□□ 1.78
RPAIN-210ENST00000571613 USP32Q8NFA0 1604 aa26.18■■□□□ 1.78
RPAIN-210ENST00000571613 CGNL1Q0VF96 1302 aa26.18■■□□□ 1.78
RPAIN-210ENST00000571613 ANKLE2Q86XL3 938 aa26.18■■□□□ 1.78
RPAIN-210ENST00000571613 NSD2O96028 1365 aa26.17■■□□□ 1.78
RPAIN-210ENST00000571613 PIK3R4Q99570 1358 aa26.17■■□□□ 1.78
RPAIN-210ENST00000571613 PLEKHH1Q9ULM0 1364 aa26.17■■□□□ 1.78
RPAIN-210ENST00000571613 INSRP06213 1382 aa26.17■■□□□ 1.78
RPAIN-210ENST00000571613 PPP2R1AP30153 589 aa26.16■■□□□ 1.78
RPAIN-210ENST00000571613 WASLO00401 505 aaPredicted RBP26.15■■□□□ 1.78
RPAIN-210ENST00000571613 SLC26A8Q96RN1 970 aa26.15■■□□□ 1.78
RPAIN-210ENST00000571613 ZBED9Q6R2W3 1325 aa26.14■■□□□ 1.78
RPAIN-210ENST00000571613 HDGFL2Q7Z4V5 671 aaPredicted RBP26.13■■□□□ 1.77
RPAIN-210ENST00000571613 ROBO2Q9HCK4 1378 aa26.12■■□□□ 1.77
RPAIN-210ENST00000571613 PTCH1Q13635 1447 aa26.11■■□□□ 1.77
RPAIN-210ENST00000571613 AMOTL2Q9Y2J4 779 aa26.1■■□□□ 1.77
RPAIN-210ENST00000571613 GTF3C3Q9Y5Q9 886 aa26.1■■□□□ 1.77
RPAIN-210ENST00000571613 A0A1W2PP64 1363 aa26.09■■□□□ 1.77
RPAIN-210ENST00000571613 SCAF1Q9H7N4 1312 aaKnown RBP26.08■■□□□ 1.77
RPAIN-210ENST00000571613 ATP7BP35670 1465 aa26.08■■□□□ 1.77
RPAIN-210ENST00000571613 MORC1Q86VD1 984 aa26.08■■□□□ 1.77
RPAIN-210ENST00000571613 PTPRUQ92729 1446 aa26.08■■□□□ 1.77
RPAIN-210ENST00000571613 ADGRB2O60241 1585 aa26.07■■□□□ 1.76
RPAIN-210ENST00000571613 CABP1Q9NZU7 370 aa26.06■■□□□ 1.76
RPAIN-210ENST00000571613 CCDC61Q9Y6R9 512 aa26.05■■□□□ 1.76
RPAIN-210ENST00000571613 CD163L1Q9NR16 1453 aa26.03■■□□□ 1.76
RPAIN-210ENST00000571613 NUDT16Q96DE0 195 aaKnown RBP26.02■■□□□ 1.76
RPAIN-210ENST00000571613 WDR43Q15061 677 aaKnown RBP eCLIP26■■□□□ 1.75
RPAIN-210ENST00000571613 XRN1Q8IZH2 1706 aaKnown RBP26■■□□□ 1.75
RPAIN-210ENST00000571613 PPIP5K1Q6PFW1 1433 aa25.99■■□□□ 1.75
RPAIN-210ENST00000571613 POLR3AO14802 1390 aaPredicted RBP25.99■■□□□ 1.75
RPAIN-210ENST00000571613 ZNF692Q9BU19 519 aaPredicted RBP25.98■■□□□ 1.75
RPAIN-210ENST00000571613 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.97■■□□□ 1.75
RPAIN-210ENST00000571613 NPHP4O75161 1426 aaPredicted RBP25.96■■□□□ 1.75
RPAIN-210ENST00000571613 CPSF1Q10570 1443 aaKnown RBP25.96■■□□□ 1.75
RPAIN-210ENST00000571613 BLMP54132 1417 aaPredicted RBP25.96■■□□□ 1.75
RPAIN-210ENST00000571613 EDC4Q6P2E9 1401 aaKnown RBP25.94■■□□□ 1.74
RPAIN-210ENST00000571613 CDC42BPGQ6DT37 1551 aa25.93■■□□□ 1.74
RPAIN-210ENST00000571613 FYB1O15117 783 aa25.93■■□□□ 1.74
RPAIN-210ENST00000571613 CFAP53Q96M91 514 aa25.93■■□□□ 1.74
RPAIN-210ENST00000571613 KCNA6P17658 529 aa25.92■■□□□ 1.74
RPAIN-210ENST00000571613 PLEKHG3A1L390 1219 aa25.9■■□□□ 1.74
RPAIN-210ENST00000571613 ADAMTS8Q9UP79 889 aa25.9■■□□□ 1.74
RPAIN-210ENST00000571613 CHD2O14647 1828 aaKnown RBP25.89■■□□□ 1.74
RPAIN-210ENST00000571613 ANKRD26Q9UPS8 1709 aa25.89■■□□□ 1.74
RPAIN-210ENST00000571613 PRR36Q9H6K5 1346 aa25.89■■□□□ 1.73
RPAIN-210ENST00000571613 PDE3BQ13370 1112 aa25.87■■□□□ 1.73
RPAIN-210ENST00000571613 GGNBP2Q9H3C7 697 aa25.87■■□□□ 1.73
RPAIN-210ENST00000571613 ANKARQ7Z5J8 1434 aa25.86■■□□□ 1.73
RPAIN-210ENST00000571613 TNNT2P45379 298 aaPredicted RBP25.86■■□□□ 1.73
RPAIN-210ENST00000571613 MTHFSP49914 203 aa25.86■■□□□ 1.73
RPAIN-210ENST00000571613 KIF20BQ96Q89 1820 aa25.85■■□□□ 1.73
RPAIN-210ENST00000571613 TOPAZ1Q8N9V7 1692 aa25.84■■□□□ 1.73
RPAIN-210ENST00000571613 NGEFQ8N5V2 710 aa25.83■■□□□ 1.73
RPAIN-210ENST00000571613 SMG6Q86US8 1419 aaKnown RBP25.83■■□□□ 1.73
RPAIN-210ENST00000571613 ITSN1Q15811 1721 aa25.83■■□□□ 1.73
RPAIN-210ENST00000571613 MON2Q7Z3U7 1717 aa25.83■■□□□ 1.73
RPAIN-210ENST00000571613 AKAP12Q02952 1782 aa25.82■■□□□ 1.72
RPAIN-210ENST00000571613 NEFLP07196 543 aa25.82■■□□□ 1.72
RPAIN-210ENST00000571613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.82■■□□□ 1.72
RPAIN-210ENST00000571613 NCKAP5LQ9HCH0 1330 aa25.82■■□□□ 1.72
RPAIN-210ENST00000571613 NUDCQ9Y266 331 aa25.8■■□□□ 1.72
RPAIN-210ENST00000571613 ACEP12821 1306 aa25.8■■□□□ 1.72
RPAIN-210ENST00000571613 COG3Q96JB2 828 aa25.77■■□□□ 1.72
RPAIN-210ENST00000571613 NWD1Q149M9 1564 aa25.76■■□□□ 1.71
RPAIN-210ENST00000571613 USP6P35125 1406 aa25.75■■□□□ 1.71
RPAIN-210ENST00000571613 ADGRL3Q9HAR2 1447 aa25.74■■□□□ 1.71
RPAIN-210ENST00000571613 AATKQ6ZMQ8 1374 aa25.74■■□□□ 1.71
RPAIN-210ENST00000571613 TTC21BQ7Z4L5 1316 aa25.74■■□□□ 1.71
RPAIN-210ENST00000571613 TTC21AQ8NDW8 1320 aa25.74■■□□□ 1.71
RPAIN-210ENST00000571613 NUTM2FA1L443 756 aa25.74■■□□□ 1.71
RPAIN-210ENST00000571613 FMN2Q9NZ56 1722 aa25.73■■□□□ 1.71
RPAIN-210ENST00000571613 KDM4FA0A1W2PPD8 638 aa25.72■■□□□ 1.71
RPAIN-210ENST00000571613 NGDNQ8NEJ9 315 aaKnown RBP25.72■■□□□ 1.71
RPAIN-210ENST00000571613 NKTRP30414 1462 aaKnown RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms