RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 NLRP7Q8WX94 980 aa12.65□□□□□ -0.38
CCDC113-205ENST00000569374 ATP10BO94823 1461 aa12.65□□□□□ -0.38
CCDC113-205ENST00000569374 SULF1Q8IWU6 871 aa12.64□□□□□ -0.39
CCDC113-205ENST00000569374 PROCA1Q8NCQ7 364 aaPredicted RBP12.64□□□□□ -0.39
CCDC113-205ENST00000569374 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
CCDC113-205ENST00000569374 CLUAP1Q96AJ1 413 aa12.64□□□□□ -0.39
CCDC113-205ENST00000569374 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC113-205ENST00000569374 TBC1D2Q9BYX2 928 aa12.63□□□□□ -0.39
CCDC113-205ENST00000569374 C1orf115Q9H7X2 142 aa12.63□□□□□ -0.39
CCDC113-205ENST00000569374 ABCA9Q8IUA7 1624 aa12.62□□□□□ -0.39
CCDC113-205ENST00000569374 CDK13Q14004 1512 aaKnown RBP12.62□□□□□ -0.39
CCDC113-205ENST00000569374 SPDYE5A6NIY4 337 aa12.61□□□□□ -0.39
CCDC113-205ENST00000569374 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
CCDC113-205ENST00000569374 BANK1Q8NDB2 785 aa12.61□□□□□ -0.39
CCDC113-205ENST00000569374 HOXB3P14651 431 aaPredicted RBP12.6□□□□□ -0.39
CCDC113-205ENST00000569374 BCL2L12Q9HB09 334 aa12.6□□□□□ -0.39
CCDC113-205ENST00000569374 TTC37Q6PGP7 1564 aa12.6□□□□□ -0.39
CCDC113-205ENST00000569374 EFCAB5A4FU69 1503 aa12.59□□□□□ -0.39
CCDC113-205ENST00000569374 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
CCDC113-205ENST00000569374 KHSRPQ92945 711 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC113-205ENST00000569374 SCUBE2Q9NQ36 999 aa12.59□□□□□ -0.39
CCDC113-205ENST00000569374 FRMPD1Q5SYB0 1578 aa12.59□□□□□ -0.39
CCDC113-205ENST00000569374 RCCD1A6NED2 376 aa12.58□□□□□ -0.4
CCDC113-205ENST00000569374 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
CCDC113-205ENST00000569374 PPP1R3GB7ZBB8 358 aa12.58□□□□□ -0.4
CCDC113-205ENST00000569374 PTPREP23469 700 aa12.58□□□□□ -0.4
CCDC113-205ENST00000569374 TMEM259Q4ZIN3 620 aa12.58□□□□□ -0.4
CCDC113-205ENST00000569374 MAMSTRQ6ZN01 415 aa12.58□□□□□ -0.4
CCDC113-205ENST00000569374 ARHGAP35Q9NRY4 1499 aa12.58□□□□□ -0.4
CCDC113-205ENST00000569374 KCNH8Q96L42 1107 aa12.57□□□□□ -0.4
CCDC113-205ENST00000569374 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
CCDC113-205ENST00000569374 MAGI3Q5TCQ9 1506 aa12.57□□□□□ -0.4
CCDC113-205ENST00000569374 DNAJB2P25686 324 aa12.56□□□□□ -0.4
CCDC113-205ENST00000569374 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
CCDC113-205ENST00000569374 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
CCDC113-205ENST00000569374 EYA1Q99502 592 aa12.56□□□□□ -0.4
CCDC113-205ENST00000569374 TEX14Q8IWB6 1497 aa12.56□□□□□ -0.4
CCDC113-205ENST00000569374 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
CCDC113-205ENST00000569374 ADGRL1O94910 1474 aa12.55□□□□□ -0.4
CCDC113-205ENST00000569374 SIGLEC1Q9BZZ2 1709 aa12.55□□□□□ -0.4
CCDC113-205ENST00000569374 RFC5P40937 340 aa12.55□□□□□ -0.4
CCDC113-205ENST00000569374 TUSC1Q2TAM9 212 aa12.55□□□□□ -0.4
CCDC113-205ENST00000569374 RIC3Q7Z5B4 369 aa12.55□□□□□ -0.4
CCDC113-205ENST00000569374 KIF14Q15058 1648 aa12.55□□□□□ -0.4
CCDC113-205ENST00000569374 PCF11O94913 1555 aaKnown RBP12.54□□□□□ -0.4
CCDC113-205ENST00000569374 CD46P15529 392 aa12.53□□□□□ -0.4
CCDC113-205ENST00000569374 COL9A1P20849 921 aa12.53□□□□□ -0.4
CCDC113-205ENST00000569374 PPP2R2DQ66LE6 453 aa12.53□□□□□ -0.4
CCDC113-205ENST00000569374 SPIRE2Q8WWL2 714 aa12.53□□□□□ -0.4
CCDC113-205ENST00000569374 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.4
CCDC113-205ENST00000569374 SNPHO15079 494 aa12.52□□□□□ -0.41
CCDC113-205ENST00000569374 GJA5P36382 358 aa12.52□□□□□ -0.41
CCDC113-205ENST00000569374 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
CCDC113-205ENST00000569374 CCDC82Q8N4S0 544 aa12.52□□□□□ -0.41
CCDC113-205ENST00000569374 PRM3Q9NNZ6 103 aa12.52□□□□□ -0.41
CCDC113-205ENST00000569374 HECW1Q76N89 1606 aa12.51□□□□□ -0.41
CCDC113-205ENST00000569374 RICTORQ6R327 1708 aa12.51□□□□□ -0.41
CCDC113-205ENST00000569374 RSPH4AQ5TD94 716 aa12.51□□□□□ -0.41
CCDC113-205ENST00000569374 WWC1Q8IX03 1113 aa12.51□□□□□ -0.41
CCDC113-205ENST00000569374 TSKSQ9UJT2 592 aa12.51□□□□□ -0.41
CCDC113-205ENST00000569374 DDX11L8A8MPP1 907 aa12.5□□□□□ -0.41
CCDC113-205ENST00000569374 TRIM6-TRIM34B2RNG4 842 aa12.5□□□□□ -0.41
CCDC113-205ENST00000569374 SPTLC1O15269 473 aa12.5□□□□□ -0.41
CCDC113-205ENST00000569374 TATDN2Q93075 761 aa12.5□□□□□ -0.41
CCDC113-205ENST00000569374 FAM198AQ9UFP1 575 aa12.5□□□□□ -0.41
CCDC113-205ENST00000569374 CCDC97Q96F63 343 aaPredicted RBP12.49□□□□□ -0.41
CCDC113-205ENST00000569374 TMEM134Q9H6X4 195 aa12.49□□□□□ -0.41
CCDC113-205ENST00000569374 LIMD1Q9UGP4 676 aa12.49□□□□□ -0.41
CCDC113-205ENST00000569374 SERPINA10Q9UK55 444 aa12.49□□□□□ -0.41
CCDC113-205ENST00000569374 PNMA3Q9UL41 463 aa12.49□□□□□ -0.41
CCDC113-205ENST00000569374 FNBP4Q8N3X1 1017 aaPredicted RBP12.48□□□□□ -0.41
CCDC113-205ENST00000569374 RSBN1LQ6PCB5 846 aaPredicted RBP12.47□□□□□ -0.41
CCDC113-205ENST00000569374 POM121Q96HA1 1249 aa12.47□□□□□ -0.41
CCDC113-205ENST00000569374 ZNF777Q9ULD5 760 aaPredicted RBP12.47□□□□□ -0.41
CCDC113-205ENST00000569374 COG6Q9Y2V7 657 aa12.47□□□□□ -0.41
CCDC113-205ENST00000569374 ARAP3Q8WWN8 1544 aa12.47□□□□□ -0.41
CCDC113-205ENST00000569374 MYO5CQ9NQX4 1742 aa12.46□□□□□ -0.41
CCDC113-205ENST00000569374 SOCS7O14512 581 aa12.46□□□□□ -0.41
CCDC113-205ENST00000569374 POTEJP0CG39 1038 aa12.45□□□□□ -0.42
CCDC113-205ENST00000569374 PODXL2Q9NZ53 605 aa12.45□□□□□ -0.42
CCDC113-205ENST00000569374 RDH13Q8NBN7 331 aa12.44□□□□□ -0.42
CCDC113-205ENST00000569374 SNRKQ9NRH2 765 aa12.44□□□□□ -0.42
CCDC113-205ENST00000569374 ARHGEF40Q8TER5 1519 aa12.43□□□□□ -0.42
CCDC113-205ENST00000569374 USP46P62068 366 aa12.43□□□□□ -0.42
CCDC113-205ENST00000569374 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
CCDC113-205ENST00000569374 CDC42BPBQ9Y5S2 1711 aa12.42□□□□□ -0.42
CCDC113-205ENST00000569374 MOXD2PA6NHM9 499 aa12.42□□□□□ -0.42
CCDC113-205ENST00000569374 PDIA4P13667 645 aaKnown RBP12.42□□□□□ -0.42
CCDC113-205ENST00000569374 HOXB1P14653 301 aaPredicted RBP12.42□□□□□ -0.42
CCDC113-205ENST00000569374 CSPP1Q1MSJ5 1256 aa12.42□□□□□ -0.42
CCDC113-205ENST00000569374 NEO1Q92859 1461 aa12.41□□□□□ -0.42
CCDC113-205ENST00000569374 NUTM2BA6NNL0 878 aaPredicted RBP12.41□□□□□ -0.42
CCDC113-205ENST00000569374 NUTM2EB1AL46 878 aaPredicted RBP12.41□□□□□ -0.42
CCDC113-205ENST00000569374 KDM4AO75164 1064 aa12.41□□□□□ -0.42
CCDC113-205ENST00000569374 RAPGEF3O95398 923 aa12.41□□□□□ -0.42
CCDC113-205ENST00000569374 NUTM2DQ5VT03 806 aaPredicted RBP12.41□□□□□ -0.42
CCDC113-205ENST00000569374 NUTM2AQ8IVF1 878 aaPredicted RBP12.41□□□□□ -0.42
CCDC113-205ENST00000569374 CFAP74Q9C0B2 1584 aa12.41□□□□□ -0.42
CCDC113-205ENST00000569374 ADAMTSL3P82987 1691 aa12.41□□□□□ -0.42
CCDC113-205ENST00000569374 MADDQ8WXG6 1647 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms