RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PSDA5PKW4 1024 aaPredicted RBP9.5□□□□□ -0.89
CDH13-211ENST00000568770 GNPATO15228 680 aa9.5□□□□□ -0.89
CDH13-211ENST00000568770 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
CDH13-211ENST00000568770 SPATA31D1Q6ZQQ2 1576 aa9.5□□□□□ -0.89
CDH13-211ENST00000568770 HIC1Q14526 733 aa9.49□□□□□ -0.89
CDH13-211ENST00000568770 SCAPERQ9BY12 1400 aa9.48□□□□□ -0.89
CDH13-211ENST00000568770 ATP10AO60312 1499 aa9.48□□□□□ -0.89
CDH13-211ENST00000568770 CEBPAP49715 358 aaPredicted RBP9.48□□□□□ -0.89
CDH13-211ENST00000568770 C3P01024 1663 aa9.48□□□□□ -0.89
CDH13-211ENST00000568770 C9orf84Q5VXU9 1444 aa9.48□□□□□ -0.89
CDH13-211ENST00000568770 CDK13Q14004 1512 aaKnown RBP9.47□□□□□ -0.89
CDH13-211ENST00000568770 PSEN2P49810 448 aa9.47□□□□□ -0.89
CDH13-211ENST00000568770 KRI1Q8N9T8 703 aaKnown RBP9.47□□□□□ -0.89
CDH13-211ENST00000568770 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
CDH13-211ENST00000568770 PLCH2O75038 1416 aa9.47□□□□□ -0.89
CDH13-211ENST00000568770 HS3ST6Q96QI5 342 aa9.46□□□□□ -0.9
CDH13-211ENST00000568770 PTPREP23469 700 aa9.45□□□□□ -0.9
CDH13-211ENST00000568770 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
CDH13-211ENST00000568770 KCNK17Q96T54 332 aa9.45□□□□□ -0.9
CDH13-211ENST00000568770 FAM198AQ9UFP1 575 aa9.45□□□□□ -0.9
CDH13-211ENST00000568770 UHRF1BP1Q6BDS2 1440 aa9.45□□□□□ -0.9
CDH13-211ENST00000568770 IRF6O14896 467 aa9.44□□□□□ -0.9
CDH13-211ENST00000568770 PADI6Q6TGC4 694 aa9.44□□□□□ -0.9
CDH13-211ENST00000568770 KIF14Q15058 1648 aa9.44□□□□□ -0.9
CDH13-211ENST00000568770 CDC42BPBQ9Y5S2 1711 aa9.43□□□□□ -0.9
CDH13-211ENST00000568770 LTBP4Q8N2S1 1624 aa9.43□□□□□ -0.9
CDH13-211ENST00000568770 MAP2K5Q13163 448 aa9.43□□□□□ -0.9
CDH13-211ENST00000568770 ZNF687Q8N1G0 1237 aa9.43□□□□□ -0.9
CDH13-211ENST00000568770 LRRIQ1Q96JM4 1722 aa9.42□□□□□ -0.9
CDH13-211ENST00000568770 ABCA6Q8N139 1617 aa9.42□□□□□ -0.9
CDH13-211ENST00000568770 KDM5CP41229 1560 aa9.42□□□□□ -0.9
CDH13-211ENST00000568770 DIP2CQ9Y2E4 1556 aa9.42□□□□□ -0.9
CDH13-211ENST00000568770 ZNF518AQ6AHZ1 1483 aa9.42□□□□□ -0.9
CDH13-211ENST00000568770 MINK1Q8N4C8 1332 aaPredicted RBP9.42□□□□□ -0.9
CDH13-211ENST00000568770 C3orf80F5H4A9 247 aa9.42□□□□□ -0.9
CDH13-211ENST00000568770 PRSS12P56730 875 aa9.42□□□□□ -0.9
CDH13-211ENST00000568770 DMRTA1Q5VZB9 504 aa9.42□□□□□ -0.9
CDH13-211ENST00000568770 TTC13Q8NBP0 860 aa9.42□□□□□ -0.9
CDH13-211ENST00000568770 CCDC102AQ96A19 550 aa9.42□□□□□ -0.9
CDH13-211ENST00000568770 CDCA7LQ96GN5 454 aa9.42□□□□□ -0.9
CDH13-211ENST00000568770 PTPRTO14522 1441 aa9.41□□□□□ -0.9
CDH13-211ENST00000568770 PPP1R3GB7ZBB8 358 aa9.41□□□□□ -0.9
CDH13-211ENST00000568770 PROX2Q3B8N5 592 aa9.41□□□□□ -0.9
CDH13-211ENST00000568770 EFCAB2Q5VUJ9 269 aa9.41□□□□□ -0.9
CDH13-211ENST00000568770 AK7Q96M32 723 aa9.41□□□□□ -0.9
CDH13-211ENST00000568770 TSKSQ9UJT2 592 aa9.41□□□□□ -0.9
CDH13-211ENST00000568770 SUPT6HQ7KZ85 1726 aaKnown RBP9.41□□□□□ -0.9
CDH13-211ENST00000568770 REREQ9P2R6 1566 aa9.41□□□□□ -0.9
CDH13-211ENST00000568770 ARHGAP5Q13017 1502 aa9.41□□□□□ -0.9
CDH13-211ENST00000568770 ARHGAP33O14559 1287 aa9.4□□□□□ -0.9
CDH13-211ENST00000568770 TRIM66O15016 1216 aa9.4□□□□□ -0.9
CDH13-211ENST00000568770 AFAP1Q8N556 730 aa9.4□□□□□ -0.9
CDH13-211ENST00000568770 PHOX2BQ99453 314 aa9.4□□□□□ -0.9
CDH13-211ENST00000568770 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
CDH13-211ENST00000568770 ATP1B4Q9UN42 357 aaPredicted RBP9.39□□□□□ -0.91
CDH13-211ENST00000568770 IQSEC2Q5JU85 1478 aa9.39□□□□□ -0.91
CDH13-211ENST00000568770 ITSN2Q9NZM3 1697 aa9.39□□□□□ -0.91
CDH13-211ENST00000568770 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
CDH13-211ENST00000568770 EEA1Q15075 1411 aa9.38□□□□□ -0.91
CDH13-211ENST00000568770 KIDINS220Q9ULH0 1771 aa9.37□□□□□ -0.91
CDH13-211ENST00000568770 ADGRG1Q9Y653 693 aa9.37□□□□□ -0.91
CDH13-211ENST00000568770 CAMSAP1Q5T5Y3 1602 aa9.37□□□□□ -0.91
CDH13-211ENST00000568770 NCOA1Q15788 1441 aa9.37□□□□□ -0.91
CDH13-211ENST00000568770 TRAPPC8Q9Y2L5 1435 aa9.37□□□□□ -0.91
CDH13-211ENST00000568770 AGLP35573 1532 aa9.36□□□□□ -0.91
CDH13-211ENST00000568770 MROH2AA6NES4 1674 aa9.36□□□□□ -0.91
CDH13-211ENST00000568770 MLH3Q9UHC1 1453 aa9.36□□□□□ -0.91
CDH13-211ENST00000568770 PREX2Q70Z35 1606 aa9.36□□□□□ -0.91
CDH13-211ENST00000568770 BRPF1P55201 1214 aaPredicted RBP9.36□□□□□ -0.91
CDH13-211ENST00000568770 ESF1Q9H501 851 aaKnown RBP9.36□□□□□ -0.91
CDH13-211ENST00000568770 RBM27Q9P2N5 1060 aaKnown RBP9.36□□□□□ -0.91
CDH13-211ENST00000568770 CDC42BPAQ5VT25 1732 aa9.36□□□□□ -0.91
CDH13-211ENST00000568770 TRIM6-TRIM34B2RNG4 842 aa9.35□□□□□ -0.91
CDH13-211ENST00000568770 FMN1Q68DA7 1419 aa9.35□□□□□ -0.91
CDH13-211ENST00000568770 NLRP7Q8WX94 980 aa9.35□□□□□ -0.91
CDH13-211ENST00000568770 CDK11AQ9UQ88 783 aaPredicted RBP9.35□□□□□ -0.91
CDH13-211ENST00000568770 TROQ12816 1431 aaPredicted RBP9.34□□□□□ -0.91
CDH13-211ENST00000568770 PDE4DQ08499 809 aa9.34□□□□□ -0.91
CDH13-211ENST00000568770 CLTCQ00610 1675 aaKnown RBP9.34□□□□□ -0.91
CDH13-211ENST00000568770 ABCC1P33527 1531 aa9.34□□□□□ -0.91
CDH13-211ENST00000568770 ZNF142P52746 1687 aaPredicted RBP9.33□□□□□ -0.92
CDH13-211ENST00000568770 CLIP1P30622 1438 aa9.33□□□□□ -0.92
CDH13-211ENST00000568770 SMAPO00193 183 aa9.33□□□□□ -0.92
CDH13-211ENST00000568770 PBX2P40425 430 aa9.33□□□□□ -0.92
CDH13-211ENST00000568770 METTL3Q86U44 580 aaKnown RBP9.33□□□□□ -0.92
CDH13-211ENST00000568770 GPBP1L1Q9HC44 474 aaPredicted RBP9.33□□□□□ -0.92
CDH13-211ENST00000568770 KIAA1468Q9P260 1216 aa9.33□□□□□ -0.92
CDH13-211ENST00000568770 ARHGAP35Q9NRY4 1499 aa9.33□□□□□ -0.92
CDH13-211ENST00000568770 CNTLNQ9NXG0 1405 aa9.32□□□□□ -0.92
CDH13-211ENST00000568770 MYO3AQ8NEV4 1616 aa9.32□□□□□ -0.92
CDH13-211ENST00000568770 NUDT18Q6ZVK8 323 aa9.32□□□□□ -0.92
CDH13-211ENST00000568770 PXYLP1Q8TE99 480 aa9.32□□□□□ -0.92
CDH13-211ENST00000568770 EYA1Q99502 592 aa9.32□□□□□ -0.92
CDH13-211ENST00000568770 REPIN1Q9BWE0 567 aaKnown RBP9.32□□□□□ -0.92
CDH13-211ENST00000568770 VPS9D1Q9Y2B5 631 aa9.32□□□□□ -0.92
CDH13-211ENST00000568770 ZNF335Q9H4Z2 1342 aaPredicted RBP9.31□□□□□ -0.92
CDH13-211ENST00000568770 UBAP1LF5GYI3 381 aa9.31□□□□□ -0.92
CDH13-211ENST00000568770 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
CDH13-211ENST00000568770 TATDN2Q93075 761 aa9.31□□□□□ -0.92
CDH13-211ENST00000568770 NPATQ14207 1427 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms