RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 PODXL2Q9NZ53 605 aa11.41□□□□□ -0.58
HERPUD1-214ENST00000568651 NDUFB9Q9Y6M9 179 aa11.4□□□□□ -0.58
HERPUD1-214ENST00000568651 PSEN2P49810 448 aa11.39□□□□□ -0.59
HERPUD1-214ENST00000568651 MTMR2Q13614 643 aa11.39□□□□□ -0.59
HERPUD1-214ENST00000568651 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
HERPUD1-214ENST00000568651 GJD4Q96KN9 370 aaPredicted RBP11.38□□□□□ -0.59
HERPUD1-214ENST00000568651 PCDHGC3Q9UN70 934 aa11.38□□□□□ -0.59
HERPUD1-214ENST00000568651 TBC1D2BQ9UPU7 963 aa11.38□□□□□ -0.59
HERPUD1-214ENST00000568651 BAZ1AQ9NRL2 1556 aaPredicted RBP11.37□□□□□ -0.59
HERPUD1-214ENST00000568651 ABL2P42684 1182 aa11.37□□□□□ -0.59
HERPUD1-214ENST00000568651 TRIM26Q12899 539 aaPredicted RBP11.37□□□□□ -0.59
HERPUD1-214ENST00000568651 HELBQ8NG08 1087 aaPredicted RBP11.37□□□□□ -0.59
HERPUD1-214ENST00000568651 NECTIN2Q92692 538 aa11.37□□□□□ -0.59
HERPUD1-214ENST00000568651 CADPSQ9ULU8 1353 aa11.37□□□□□ -0.59
HERPUD1-214ENST00000568651 ERBB3P21860 1342 aa11.35□□□□□ -0.59
HERPUD1-214ENST00000568651 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
HERPUD1-214ENST00000568651 WASHC4Q2M389 1173 aa11.35□□□□□ -0.59
HERPUD1-214ENST00000568651 NBPF3Q9H094 633 aa11.35□□□□□ -0.59
HERPUD1-214ENST00000568651 SEPT9Q9UHD8 586 aaPredicted RBP11.35□□□□□ -0.59
HERPUD1-214ENST00000568651 MROH2BQ7Z745 1585 aa11.34□□□□□ -0.59
HERPUD1-214ENST00000568651 VARS2Q5ST30 1063 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-214ENST00000568651 POTEEQ6S8J3 1075 aa11.34□□□□□ -0.59
HERPUD1-214ENST00000568651 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
HERPUD1-214ENST00000568651 CALR3Q96L12 384 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-214ENST00000568651 TRAIPQ9BWF2 469 aa11.34□□□□□ -0.59
HERPUD1-214ENST00000568651 VPS9D1Q9Y2B5 631 aa11.34□□□□□ -0.59
HERPUD1-214ENST00000568651 WDR62O43379 1518 aa11.32□□□□□ -0.6
HERPUD1-214ENST00000568651 CFHP08603 1231 aa11.32□□□□□ -0.6
HERPUD1-214ENST00000568651 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
HERPUD1-214ENST00000568651 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
HERPUD1-214ENST00000568651 GLMNQ92990 594 aa11.32□□□□□ -0.6
HERPUD1-214ENST00000568651 TK2O00142 265 aa11.31□□□□□ -0.6
HERPUD1-214ENST00000568651 FUT2Q10981 343 aa11.31□□□□□ -0.6
HERPUD1-214ENST00000568651 PEG3Q9GZU2 1588 aa11.3□□□□□ -0.6
HERPUD1-214ENST00000568651 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
HERPUD1-214ENST00000568651 CTDSPL2Q05D32 466 aa11.3□□□□□ -0.6
HERPUD1-214ENST00000568651 IRF5Q13568 498 aa11.3□□□□□ -0.6
HERPUD1-214ENST00000568651 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
HERPUD1-214ENST00000568651 SAMD7Q7Z3H4 446 aa11.3□□□□□ -0.6
HERPUD1-214ENST00000568651 ZNF687Q8N1G0 1237 aa11.3□□□□□ -0.6
HERPUD1-214ENST00000568651 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
HERPUD1-214ENST00000568651 ZBTB7CA1YPR0 619 aa11.29□□□□□ -0.6
HERPUD1-214ENST00000568651 BHMG1C9JSJ3 638 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-214ENST00000568651 HLA-CQ95604 372 aa11.29□□□□□ -0.6
HERPUD1-214ENST00000568651 POM121CA8CG34 1229 aa11.28□□□□□ -0.6
HERPUD1-214ENST00000568651 CFAP99D6REC4 459 aa11.28□□□□□ -0.6
HERPUD1-214ENST00000568651 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
HERPUD1-214ENST00000568651 GPR37L1O60883 481 aa11.28□□□□□ -0.6
HERPUD1-214ENST00000568651 PRR14Q9BWN1 585 aa11.28□□□□□ -0.6
HERPUD1-214ENST00000568651 HMX1Q9NP08 348 aaPredicted RBP11.28□□□□□ -0.6
HERPUD1-214ENST00000568651 CEP164Q9UPV0 1460 aa11.27□□□□□ -0.6
HERPUD1-214ENST00000568651 DESI1Q6ICB0 168 aa11.27□□□□□ -0.61
HERPUD1-214ENST00000568651 PDE4CQ08493 712 aa11.26□□□□□ -0.61
HERPUD1-214ENST00000568651 Q3C1V9 767 aa11.26□□□□□ -0.61
HERPUD1-214ENST00000568651 KCTD17Q8N5Z5 321 aa11.26□□□□□ -0.61
HERPUD1-214ENST00000568651 SOX11P35716 441 aa11.25□□□□□ -0.61
HERPUD1-214ENST00000568651 EMP3P54852 163 aa11.25□□□□□ -0.61
HERPUD1-214ENST00000568651 RETREG3Q86VR2 466 aa11.25□□□□□ -0.61
HERPUD1-214ENST00000568651 ZFRQ96KR1 1074 aaKnown RBP11.25□□□□□ -0.61
HERPUD1-214ENST00000568651 AXIN2Q9Y2T1 843 aa11.25□□□□□ -0.61
HERPUD1-214ENST00000568651 ACTN4O43707 911 aaKnown RBP11.24□□□□□ -0.61
HERPUD1-214ENST00000568651 FANCD2Q9BXW9 1451 aa11.24□□□□□ -0.61
HERPUD1-214ENST00000568651 PRR7Q8TB68 274 aa11.23□□□□□ -0.61
HERPUD1-214ENST00000568651 LRRN4Q8WUT4 740 aa11.23□□□□□ -0.61
HERPUD1-214ENST00000568651 ST18O60284 1047 aa11.22□□□□□ -0.61
HERPUD1-214ENST00000568651 MORN1Q5T089 497 aa11.22□□□□□ -0.61
HERPUD1-214ENST00000568651 CYB5RLQ6IPT4 315 aa11.22□□□□□ -0.61
HERPUD1-214ENST00000568651 PNMA1Q8ND90 353 aa11.22□□□□□ -0.61
HERPUD1-214ENST00000568651 HDGFL1Q5TGJ6 251 aa11.21□□□□□ -0.61
HERPUD1-214ENST00000568651 MRPL50Q8N5N7 158 aaKnown RBP11.21□□□□□ -0.61
HERPUD1-214ENST00000568651 TSC1Q92574 1164 aa11.21□□□□□ -0.61
HERPUD1-214ENST00000568651 LRCH3Q96II8 777 aa11.21□□□□□ -0.61
HERPUD1-214ENST00000568651 ACIN1Q9UKV3 1341 aaKnown RBP11.2□□□□□ -0.62
HERPUD1-214ENST00000568651 RETREG2Q8NC44 543 aa11.2□□□□□ -0.62
HERPUD1-214ENST00000568651 ADAMTS19Q8TE59 1207 aa11.2□□□□□ -0.62
HERPUD1-214ENST00000568651 PBXIP1Q96AQ6 731 aa11.2□□□□□ -0.62
HERPUD1-214ENST00000568651 SALL2Q9Y467 1007 aaPredicted RBP11.2□□□□□ -0.62
HERPUD1-214ENST00000568651 RNF40O75150 1001 aa11.19□□□□□ -0.62
HERPUD1-214ENST00000568651 ALG2Q9H553 416 aa11.19□□□□□ -0.62
HERPUD1-214ENST00000568651 RIMBP3CA6NJZ7 1639 aa11.19□□□□□ -0.62
HERPUD1-214ENST00000568651 RIMBP3BA6NNM3 1639 aa11.19□□□□□ -0.62
HERPUD1-214ENST00000568651 RIMBP3Q9UFD9 1639 aa11.19□□□□□ -0.62
HERPUD1-214ENST00000568651 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
HERPUD1-214ENST00000568651 SLC27A5Q9Y2P5 690 aa11.17□□□□□ -0.62
HERPUD1-214ENST00000568651 URB2Q14146 1524 aaKnown RBP11.17□□□□□ -0.62
HERPUD1-214ENST00000568651 VAC14Q08AM6 782 aa11.16□□□□□ -0.62
HERPUD1-214ENST00000568651 LYPD8Q6UX82 237 aa11.16□□□□□ -0.62
HERPUD1-214ENST00000568651 ARHGEF11O15085 1522 aa11.15□□□□□ -0.62
HERPUD1-214ENST00000568651 CFAP70Q5T0N1 1121 aa11.15□□□□□ -0.62
HERPUD1-214ENST00000568651 ADGRD1Q6QNK2 874 aa11.15□□□□□ -0.62
HERPUD1-214ENST00000568651 SYMPKQ92797 1274 aaKnown RBP11.15□□□□□ -0.62
HERPUD1-214ENST00000568651 PPP1R12CQ9BZL4 782 aa11.15□□□□□ -0.62
HERPUD1-214ENST00000568651 WIZO95785 1651 aa11.14□□□□□ -0.63
HERPUD1-214ENST00000568651 FAM205CA6NFA0 338 aa11.14□□□□□ -0.63
HERPUD1-214ENST00000568651 LSM11P83369 360 aaKnown RBP eCLIP11.14□□□□□ -0.63
HERPUD1-214ENST00000568651 NR6A1Q15406 480 aa11.14□□□□□ -0.63
HERPUD1-214ENST00000568651 LHX8Q68G74 356 aa11.14□□□□□ -0.63
HERPUD1-214ENST00000568651 EPS8L1Q8TE68 723 aa11.14□□□□□ -0.63
HERPUD1-214ENST00000568651 USTQ9Y2C2 406 aa11.14□□□□□ -0.63
HERPUD1-214ENST00000568651 CCDC9Q9Y3X0 531 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms