RNA–Protein interactions for RNA: ENST00000566225.1

LINC01254-201, Transcript of long intergenic non-protein coding RNA 1254, humanhuman

BASIC

Gene LINC01254, Length 2,908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01254-201ENST00000566225 ITPRIPQ8IWB1 547 aa15.14■□□□□ 0.01
LINC01254-201ENST00000566225 WDR63Q8IWG1 891 aa15.14■□□□□ 0.01
LINC01254-201ENST00000566225 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
LINC01254-201ENST00000566225 MADDQ8WXG6 1647 aa15.14■□□□□ 0.01
LINC01254-201ENST00000566225 ESPNB1AK53 854 aa15.14■□□□□ 0.01
LINC01254-201ENST00000566225 PKNOX2Q96KN3 472 aa15.14■□□□□ 0.01
LINC01254-201ENST00000566225 ERBB4Q15303 1308 aa15.14■□□□□ 0.01
LINC01254-201ENST00000566225 ADGRF5Q8IZF2 1346 aa15.14■□□□□ 0.01
LINC01254-201ENST00000566225 DDX11L8A8MPP1 907 aa15.13■□□□□ 0.01
LINC01254-201ENST00000566225 TRIM44Q96DX7 344 aaPredicted RBP15.13■□□□□ 0.01
LINC01254-201ENST00000566225 SMC4Q9NTJ3 1288 aa15.13■□□□□ 0.01
LINC01254-201ENST00000566225 PREX2Q70Z35 1606 aa15.13■□□□□ 0.01
LINC01254-201ENST00000566225 SCAPERQ9BY12 1400 aa15.13■□□□□ 0.01
LINC01254-201ENST00000566225 U2AF1L5P0DN76 240 aaPredicted RBP15.13■□□□□ 0.01
LINC01254-201ENST00000566225 U2AF1Q01081 240 aaKnown RBP eCLIP15.13■□□□□ 0.01
LINC01254-201ENST00000566225 DUOX2Q9NRD8 1548 aa15.12■□□□□ 0.01
LINC01254-201ENST00000566225 MAST1Q9Y2H9 1570 aa15.12■□□□□ 0.01
LINC01254-201ENST00000566225 ERVK-7P63135 1459 aa15.12■□□□□ 0.01
LINC01254-201ENST00000566225 AFAP1Q8N556 730 aa15.12■□□□□ 0.01
LINC01254-201ENST00000566225 NSD3Q9BZ95 1437 aa15.12■□□□□ 0.01
LINC01254-201ENST00000566225 VIRMAQ69YN4 1812 aaKnown RBP15.11■□□□□ 0.01
LINC01254-201ENST00000566225 IQGAP1P46940 1657 aa15.11■□□□□ 0.01
LINC01254-201ENST00000566225 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
LINC01254-201ENST00000566225 GAS2L3Q86XJ1 694 aa15.11■□□□□ 0.01
LINC01254-201ENST00000566225 TNPO1Q92973 898 aaKnown RBP15.11■□□□□ 0.01
LINC01254-201ENST00000566225 TRAK1Q9UPV9 953 aa15.11■□□□□ 0.01
LINC01254-201ENST00000566225 RTEL1-TNFRSF6BF6WH68 1400 aa15.11■□□□□ 0.01
LINC01254-201ENST00000566225 HSP90AB1P08238 724 aaKnown RBP15.1■□□□□ 0.01
LINC01254-201ENST00000566225 PHF23Q9BUL5 403 aaPredicted RBP15.1■□□□□ 0.01
LINC01254-201ENST00000566225 ZMYM3Q14202 1370 aa15.1■□□□□ 0.01
LINC01254-201ENST00000566225 TTC37Q6PGP7 1564 aa15.1■□□□□ 0.01
LINC01254-201ENST00000566225 CHGAP10645 457 aaKnown RBP15.1■□□□□ 0.01
LINC01254-201ENST00000566225 TRIM27P14373 513 aa15.1■□□□□ 0.01
LINC01254-201ENST00000566225 EXOSC9Q06265 439 aaKnown RBP15.1■□□□□ 0.01
LINC01254-201ENST00000566225 EFCAB2Q5VUJ9 269 aa15.1■□□□□ 0.01
LINC01254-201ENST00000566225 STAC3Q96MF2 364 aa15.1■□□□□ 0.01
LINC01254-201ENST00000566225 ZMYND15Q9H091 742 aa15.1■□□□□ 0.01
LINC01254-201ENST00000566225 CFAP53Q96M91 514 aa15.09■□□□□ 0.01
LINC01254-201ENST00000566225 LNPKQ9C0E8 428 aa15.09■□□□□ 0.01
LINC01254-201ENST00000566225 MYOM1P52179 1685 aa15.09■□□□□ 0.01
LINC01254-201ENST00000566225 PLXNC1O60486 1568 aa15.09■□□□□ 0.01
LINC01254-201ENST00000566225 SPAG9O60271 1321 aaKnown RBP15.09■□□□□ 0.01
LINC01254-201ENST00000566225 RRP9O43818 475 aaKnown RBP15.08■□□□□ 0
LINC01254-201ENST00000566225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.08■□□□□ 0
LINC01254-201ENST00000566225 SSH1Q8WYL5 1049 aa15.08■□□□□ 0
LINC01254-201ENST00000566225 TRAPPC8Q9Y2L5 1435 aa15.07■□□□□ 0
LINC01254-201ENST00000566225 SLC24A1O60721 1099 aa15.07■□□□□ 0
LINC01254-201ENST00000566225 NOB1Q9ULX3 412 aaKnown RBP15.06■□□□□ 0
LINC01254-201ENST00000566225 U2SURPO15042 1029 aaKnown RBP15.06■□□□□ 0
LINC01254-201ENST00000566225 KIF3BO15066 747 aa15.06■□□□□ 0
LINC01254-201ENST00000566225 HDAC1Q13547 482 aaPredicted RBP15.06■□□□□ 0
LINC01254-201ENST00000566225 TMEM57Q8N5G2 664 aa15.06■□□□□ 0
LINC01254-201ENST00000566225 GBP4Q96PP9 640 aa15.06■□□□□ 0
LINC01254-201ENST00000566225 DDX19BQ9UMR2 479 aa15.06■□□□□ 0
LINC01254-201ENST00000566225 KDM5AP29375 1690 aaKnown RBP15.05■□□□□ 0
LINC01254-201ENST00000566225 CCDC27Q2M243 656 aa15.05■□□□□ -0
LINC01254-201ENST00000566225 ATF7IPQ6VMQ6 1270 aa15.04■□□□□ -0
LINC01254-201ENST00000566225 TMEM132EQ6IEE7 984 aa15.04■□□□□ -0
LINC01254-201ENST00000566225 SMC5Q8IY18 1101 aa15.04■□□□□ -0
LINC01254-201ENST00000566225 DDIT3P35638 169 aa15.03■□□□□ -0
LINC01254-201ENST00000566225 CD2BP2O95400 341 aaKnown RBP15.03■□□□□ -0
LINC01254-201ENST00000566225 IQSEC2Q5JU85 1478 aa15.03■□□□□ -0
LINC01254-201ENST00000566225 TRPM2O94759 1503 aa15.03■□□□□ -0
LINC01254-201ENST00000566225 RBM25P49756 843 aaKnown RBP15.02■□□□□ -0
LINC01254-201ENST00000566225 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
LINC01254-201ENST00000566225 ISY1Q9ULR0 285 aaKnown RBP15.02■□□□□ -0
LINC01254-201ENST00000566225 PTPRTO14522 1441 aa15.02□□□□□ -0.01
LINC01254-201ENST00000566225 CLTCL1P53675 1640 aa15.02□□□□□ -0.01
LINC01254-201ENST00000566225 RAB3GAP1Q15042 981 aa15.01□□□□□ -0.01
LINC01254-201ENST00000566225 SNX21Q969T3 373 aa15.01□□□□□ -0.01
LINC01254-201ENST00000566225 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
LINC01254-201ENST00000566225 SSFA2P28290 1259 aa15□□□□□ -0.01
LINC01254-201ENST00000566225 UGGT1Q9NYU2 1555 aa15□□□□□ -0.01
LINC01254-201ENST00000566225 KANK1Q14678 1352 aa15□□□□□ -0.01
LINC01254-201ENST00000566225 ZBTB40Q9NUA8 1239 aa15□□□□□ -0.01
LINC01254-201ENST00000566225 CEP152O94986 1710 aa15□□□□□ -0.01
LINC01254-201ENST00000566225 NUCB1Q02818 461 aa14.99□□□□□ -0.01
LINC01254-201ENST00000566225 ANKRD45Q5TZF3 282 aa14.99□□□□□ -0.01
LINC01254-201ENST00000566225 CHD1LQ86WJ1 897 aa14.99□□□□□ -0.01
LINC01254-201ENST00000566225 CIZ1Q9ULV3 898 aaPredicted RBP14.99□□□□□ -0.01
LINC01254-201ENST00000566225 SPHKAPQ2M3C7 1700 aa14.99□□□□□ -0.01
LINC01254-201ENST00000566225 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
LINC01254-201ENST00000566225 NASPP49321 788 aaPredicted RBP14.99□□□□□ -0.01
LINC01254-201ENST00000566225 SKOR2Q2VWA4 1001 aaPredicted RBP14.99□□□□□ -0.01
LINC01254-201ENST00000566225 C1orf115Q9H7X2 142 aa14.99□□□□□ -0.01
LINC01254-201ENST00000566225 PLCH2O75038 1416 aa14.98□□□□□ -0.01
LINC01254-201ENST00000566225 NCOA3Q9Y6Q9 1424 aa14.98□□□□□ -0.01
LINC01254-201ENST00000566225 SAFB2Q14151 953 aaKnown RBP eCLIP14.98□□□□□ -0.01
LINC01254-201ENST00000566225 KIAA1211Q6ZU35 1233 aa14.98□□□□□ -0.01
LINC01254-201ENST00000566225 ZNF518AQ6AHZ1 1483 aa14.98□□□□□ -0.01
LINC01254-201ENST00000566225 KIF2CQ99661 725 aa14.98□□□□□ -0.01
LINC01254-201ENST00000566225 DDX49Q9Y6V7 483 aaKnown RBP14.98□□□□□ -0.01
LINC01254-201ENST00000566225 NCLP19338 710 aaKnown RBP14.97□□□□□ -0.01
LINC01254-201ENST00000566225 TRIM35Q9UPQ4 493 aa14.97□□□□□ -0.01
LINC01254-201ENST00000566225 CT47B1P0C2W7 299 aaPredicted RBP14.96□□□□□ -0.01
LINC01254-201ENST00000566225 NUTM2DQ5VT03 806 aaPredicted RBP14.96□□□□□ -0.01
LINC01254-201ENST00000566225 GAS2L2Q8NHY3 880 aa14.96□□□□□ -0.01
LINC01254-201ENST00000566225 ANP32BQ92688 251 aaKnown RBP14.96□□□□□ -0.01
LINC01254-201ENST00000566225 K7ELQ4 463 aaPredicted RBP14.96□□□□□ -0.01
LINC01254-201ENST00000566225 SHPRHQ149N8 1683 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms