RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 MTMR14Q8NCE2 650 aa3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 TATDN2Q93075 761 aa3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 EYA1Q99502 592 aa3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 TSKSQ9UJT2 592 aa3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 TBC1D2BQ9UPU7 963 aa3.2□□□□□ -1.9
SUB1P4-201ENST00000566062 POM121CA8CG34 1229 aa3.19□□□□□ -1.9
SUB1P4-201ENST00000566062 NBPF26B4DH59 902 aa3.19□□□□□ -1.9
SUB1P4-201ENST00000566062 KDM4AO75164 1064 aa3.19□□□□□ -1.9
SUB1P4-201ENST00000566062 RSPH4AQ5TD94 716 aa3.19□□□□□ -1.9
SUB1P4-201ENST00000566062 HDGFL1Q5TGJ6 251 aa3.19□□□□□ -1.9
SUB1P4-201ENST00000566062 PPP2R2DQ66LE6 453 aa3.19□□□□□ -1.9
SUB1P4-201ENST00000566062 LAPTM4BQ86VI4 370 aa3.19□□□□□ -1.9
SUB1P4-201ENST00000566062 KCTD17Q8N5Z5 321 aa3.19□□□□□ -1.9
SUB1P4-201ENST00000566062 ZBED2Q9BTP6 218 aa3.19□□□□□ -1.9
SUB1P4-201ENST00000566062 HRO43593 1189 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 LILRB3O75022 631 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 USP17L8P0C7I0 530 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 FDX1P10109 184 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 GUCA2AQ02747 115 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 PROX2Q3B8N5 592 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 CDCA8Q53HL2 280 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 ADGRD1Q6QNK2 874 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 POTEEQ6S8J3 1075 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 RETREG2Q8NC44 543 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 GLMNQ92990 594 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 TRAIPQ9BWF2 469 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 NBPF3Q9H094 633 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 GZF1Q9H116 711 aaPredicted RBP3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 RABGEF1Q9UJ41 708 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 VPS9D1Q9Y2B5 631 aa3.18□□□□□ -1.9
SUB1P4-201ENST00000566062 TRIM6-TRIM34B2RNG4 842 aa3.17□□□□□ -1.9
SUB1P4-201ENST00000566062 BHMG1C9JSJ3 638 aaPredicted RBP3.17□□□□□ -1.9
SUB1P4-201ENST00000566062 HDGFP51858 240 aaKnown RBP3.17□□□□□ -1.9
SUB1P4-201ENST00000566062 CTDSPL2Q05D32 466 aa3.17□□□□□ -1.9
SUB1P4-201ENST00000566062 HLA-CQ95604 372 aa3.17□□□□□ -1.9
SUB1P4-201ENST00000566062 KCNK17Q96T54 332 aa3.17□□□□□ -1.9
SUB1P4-201ENST00000566062 ZBTB3Q9H5J0 574 aa3.17□□□□□ -1.9
SUB1P4-201ENST00000566062 TMEM134Q9H6X4 195 aa3.17□□□□□ -1.9
SUB1P4-201ENST00000566062 KIAA1468Q9P260 1216 aa3.17□□□□□ -1.9
SUB1P4-201ENST00000566062 C6orf229H3BNL8 230 aa3.16□□□□□ -1.9
SUB1P4-201ENST00000566062 RNF40O75150 1001 aa3.16□□□□□ -1.9
SUB1P4-201ENST00000566062 GCGRP47871 477 aa3.16□□□□□ -1.9
SUB1P4-201ENST00000566062 VAC14Q08AM6 782 aa3.16□□□□□ -1.9
SUB1P4-201ENST00000566062 SWT1Q5T5J6 900 aaKnown RBP3.16□□□□□ -1.9
SUB1P4-201ENST00000566062 SEPT9Q9UHD8 586 aaPredicted RBP3.16□□□□□ -1.9
SUB1P4-201ENST00000566062 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 CARNS1A5YM72 827 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 PPP1R15AO75807 674 aaPredicted RBP3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 CSB-PGBD3P0DP91 1061 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 SLC4A3P48751 1232 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 PSEN2P49810 448 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 USP46P62068 366 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 IRF5Q13568 498 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 TUSC1Q2TAM9 212 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 TMCO4Q5TGY1 634 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 PRPF38BQ5VTL8 546 aaKnown RBP3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 ANKRD13DQ6ZTN6 518 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 NYAP1Q6ZVC0 841 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 LRRN4Q8WUT4 740 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 SYMPKQ92797 1274 aaKnown RBP3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 STAC3Q96MF2 364 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 PCDHGC3Q9UN70 934 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 NDUFB9Q9Y6M9 179 aa3.15□□□□□ -1.91
SUB1P4-201ENST00000566062 HOXA2O43364 376 aa3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 SLC10A3P09131 477 aa3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 LMOD1P29536 600 aaPredicted RBP3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 PDE4CQ08493 712 aa3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 MTMR2Q13614 643 aa3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 WASHC4Q2M389 1173 aa3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 GRIPAP1Q4V328 841 aa3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 DMRTA1Q5VZB9 504 aa3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 MRPL50Q8N5N7 158 aaKnown RBP3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 HELBQ8NG08 1087 aaPredicted RBP3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 EPS8L1Q8TE68 723 aa3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 HMX1Q9NP08 348 aaPredicted RBP3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 AXIN2Q9Y2T1 843 aa3.14□□□□□ -1.91
SUB1P4-201ENST00000566062 GJA5P36382 358 aa3.13□□□□□ -1.91
SUB1P4-201ENST00000566062 FUT2Q10981 343 aa3.13□□□□□ -1.91
SUB1P4-201ENST00000566062 SEMA3FQ13275 785 aa3.13□□□□□ -1.91
SUB1P4-201ENST00000566062 NR6A1Q15406 480 aa3.13□□□□□ -1.91
SUB1P4-201ENST00000566062 FAM98CQ17RN3 349 aaKnown RBP3.13□□□□□ -1.91
SUB1P4-201ENST00000566062 ADAMTS19Q8TE59 1207 aa3.13□□□□□ -1.91
SUB1P4-201ENST00000566062 PBXIP1Q96AQ6 731 aa3.13□□□□□ -1.91
SUB1P4-201ENST00000566062 GJD4Q96KN9 370 aaPredicted RBP3.13□□□□□ -1.91
SUB1P4-201ENST00000566062 TFIP11Q9UBB9 837 aaKnown RBP3.13□□□□□ -1.91
SUB1P4-201ENST00000566062 HCSTQ9UBK5 93 aa3.13□□□□□ -1.91
SUB1P4-201ENST00000566062 STK17AQ9UEE5 414 aa3.13□□□□□ -1.91
SUB1P4-201ENST00000566062 CFAP99D6REC4 459 aa3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 CFHP08603 1231 aa3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 MFAP1P55081 439 aaKnown RBP3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 PUS10Q3MIT2 529 aaKnown RBP3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 FOXD4L5Q5VV16 416 aaPredicted RBP3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 ZNF787Q6DD87 383 aa3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 SAMD7Q7Z3H4 446 aa3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 PNMA1Q8ND90 353 aa3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 PRR7Q8TB68 274 aa3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 FOXD4L4Q8WXT5 416 aaPredicted RBP3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 TRIM34Q9BYJ4 488 aa3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 PPP1R12CQ9BZL4 782 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms