RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 PIK3R4Q99570 1358 aa26.67■■□□□ 1.86
CSPG4P13-201ENST00000565545 ADGRB1O14514 1584 aa26.66■■□□□ 1.86
CSPG4P13-201ENST00000565545 SPATA31A6Q5VVP1 1343 aa26.65■■□□□ 1.86
CSPG4P13-201ENST00000565545 ST20-MTHFSA0A0A6YYL1 179 aa26.65■■□□□ 1.86
CSPG4P13-201ENST00000565545 SLC24A1O60721 1099 aa26.61■■□□□ 1.85
CSPG4P13-201ENST00000565545 ZNF772Q68DY9 489 aaPredicted RBP26.61■■□□□ 1.85
CSPG4P13-201ENST00000565545 DIP2AQ14689 1571 aa26.59■■□□□ 1.85
CSPG4P13-201ENST00000565545 COL16A1Q07092 1604 aaPredicted RBP26.59■■□□□ 1.85
CSPG4P13-201ENST00000565545 CCDC7Q96M83 1385 aa26.58■■□□□ 1.85
CSPG4P13-201ENST00000565545 WASHC2AQ641Q2 1341 aa26.58■■□□□ 1.85
CSPG4P13-201ENST00000565545 NUTM2BA6NNL0 878 aaPredicted RBP26.57■■□□□ 1.84
CSPG4P13-201ENST00000565545 NUTM2EB1AL46 878 aaPredicted RBP26.57■■□□□ 1.84
CSPG4P13-201ENST00000565545 BRINP3Q76B58 766 aa26.57■■□□□ 1.84
CSPG4P13-201ENST00000565545 NUTM2AQ8IVF1 878 aaPredicted RBP26.57■■□□□ 1.84
CSPG4P13-201ENST00000565545 NRXN3Q9Y4C0 1643 aa26.57■■□□□ 1.84
CSPG4P13-201ENST00000565545 SETD1AO15047 1707 aaKnown RBP26.56■■□□□ 1.84
CSPG4P13-201ENST00000565545 PTPRUQ92729 1446 aa26.56■■□□□ 1.84
CSPG4P13-201ENST00000565545 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.55■■□□□ 1.84
CSPG4P13-201ENST00000565545 ASXL1Q8IXJ9 1541 aa26.55■■□□□ 1.84
CSPG4P13-201ENST00000565545 LRP6O75581 1613 aa26.54■■□□□ 1.84
CSPG4P13-201ENST00000565545 C11orf95C9JLR9 678 aaPredicted RBP26.54■■□□□ 1.84
CSPG4P13-201ENST00000565545 TMEM132EQ6IEE7 984 aa26.54■■□□□ 1.84
CSPG4P13-201ENST00000565545 TESK2Q96S53 571 aa26.54■■□□□ 1.84
CSPG4P13-201ENST00000565545 KIF7Q2M1P5 1343 aa26.53■■□□□ 1.84
CSPG4P13-201ENST00000565545 AHDC1Q5TGY3 1603 aaPredicted RBP26.51■■□□□ 1.83
CSPG4P13-201ENST00000565545 SBNO2Q9Y2G9 1366 aa26.51■■□□□ 1.83
CSPG4P13-201ENST00000565545 DDX10Q13206 875 aaKnown RBP26.51■■□□□ 1.83
CSPG4P13-201ENST00000565545 YTHDC2Q9H6S0 1430 aaKnown RBP26.5■■□□□ 1.83
CSPG4P13-201ENST00000565545 RXRBP28702 533 aa26.5■■□□□ 1.83
CSPG4P13-201ENST00000565545 TMF1P82094 1093 aa26.5■■□□□ 1.83
CSPG4P13-201ENST00000565545 ARHGEF28Q8N1W1 1705 aaKnown RBP26.5■■□□□ 1.83
CSPG4P13-201ENST00000565545 CENPJQ9HC77 1338 aaPredicted RBP26.48■■□□□ 1.83
CSPG4P13-201ENST00000565545 TRAK1Q9UPV9 953 aa26.48■■□□□ 1.83
CSPG4P13-201ENST00000565545 CDCA8Q53HL2 280 aa26.47■■□□□ 1.83
CSPG4P13-201ENST00000565545 DCCP43146 1447 aa26.47■■□□□ 1.83
CSPG4P13-201ENST00000565545 LRPPRCP42704 1394 aaKnown RBP26.46■■□□□ 1.83
CSPG4P13-201ENST00000565545 DLC1Q96QB1 1528 aa26.46■■□□□ 1.83
CSPG4P13-201ENST00000565545 METP08581 1390 aa26.46■■□□□ 1.83
CSPG4P13-201ENST00000565545 UPF1Q92900 1129 aaKnown RBP eCLIP26.45■■□□□ 1.82
CSPG4P13-201ENST00000565545 LRRC59Q96AG4 307 aaKnown RBP26.45■■□□□ 1.82
CSPG4P13-201ENST00000565545 ABCC11Q96J66 1382 aa26.44■■□□□ 1.82
CSPG4P13-201ENST00000565545 QRICH2Q9H0J4 1663 aa26.44■■□□□ 1.82
CSPG4P13-201ENST00000565545 KNDC1Q76NI1 1749 aa26.42■■□□□ 1.82
CSPG4P13-201ENST00000565545 SHPRHQ149N8 1683 aa26.42■■□□□ 1.82
CSPG4P13-201ENST00000565545 AFF2P51816 1311 aa26.41■■□□□ 1.82
CSPG4P13-201ENST00000565545 MST1RQ04912 1400 aa26.41■■□□□ 1.82
CSPG4P13-201ENST00000565545 SIRT1Q96EB6 747 aa26.41■■□□□ 1.82
CSPG4P13-201ENST00000565545 DDX17Q92841 729 aaKnown RBP26.4■■□□□ 1.82
CSPG4P13-201ENST00000565545 STK26Q9P289 416 aa26.39■■□□□ 1.82
CSPG4P13-201ENST00000565545 TECPR2O15040 1411 aa26.39■■□□□ 1.81
CSPG4P13-201ENST00000565545 C8orf37Q96NL8 207 aa26.38■■□□□ 1.81
CSPG4P13-201ENST00000565545 XRN1Q8IZH2 1706 aaKnown RBP26.36■■□□□ 1.81
CSPG4P13-201ENST00000565545 ADGRL3Q9HAR2 1447 aa26.36■■□□□ 1.81
CSPG4P13-201ENST00000565545 POLR3GLQ9BT43 218 aa26.35■■□□□ 1.81
CSPG4P13-201ENST00000565545 PUS7Q96PZ0 661 aaKnown RBP26.34■■□□□ 1.81
CSPG4P13-201ENST00000565545 POGKQ9P215 609 aa26.34■■□□□ 1.81
CSPG4P13-201ENST00000565545 QTRT2Q9H974 415 aaKnown RBP26.33■■□□□ 1.81
CSPG4P13-201ENST00000565545 PRAM1Q96QH2 718 aa26.32■■□□□ 1.8
CSPG4P13-201ENST00000565545 ADAMTS2O95450 1211 aa26.31■■□□□ 1.8
CSPG4P13-201ENST00000565545 NGLY1Q96IV0 654 aa26.31■■□□□ 1.8
CSPG4P13-201ENST00000565545 PNPLA6Q8IY17 1366 aa26.31■■□□□ 1.8
CSPG4P13-201ENST00000565545 RBM6P78332 1123 aaKnown RBP26.3■■□□□ 1.8
CSPG4P13-201ENST00000565545 EVC2Q86UK5 1308 aa26.3■■□□□ 1.8
CSPG4P13-201ENST00000565545 CDK12Q9NYV4 1490 aaPredicted RBP26.29■■□□□ 1.8
CSPG4P13-201ENST00000565545 NHSL1Q5SYE7 1610 aa26.26■■□□□ 1.79
CSPG4P13-201ENST00000565545 C1orf167Q5SNV9 1468 aa26.26■■□□□ 1.79
CSPG4P13-201ENST00000565545 MIER1Q8N108 512 aa26.26■■□□□ 1.79
CSPG4P13-201ENST00000565545 ORAI2Q96SN7 254 aa26.26■■□□□ 1.79
CSPG4P13-201ENST00000565545 ANP32CO43423 234 aa26.25■■□□□ 1.79
CSPG4P13-201ENST00000565545 TULP4Q9NRJ4 1543 aa26.24■■□□□ 1.79
CSPG4P13-201ENST00000565545 PTCH1Q13635 1447 aa26.23■■□□□ 1.79
CSPG4P13-201ENST00000565545 ROBO2Q9HCK4 1378 aa26.23■■□□□ 1.79
CSPG4P13-201ENST00000565545 SAFB2Q14151 953 aaKnown RBP eCLIP26.21■■□□□ 1.79
CSPG4P13-201ENST00000565545 WAPLQ7Z5K2 1190 aa26.21■■□□□ 1.79
CSPG4P13-201ENST00000565545 MYOM1P52179 1685 aa26.21■■□□□ 1.79
CSPG4P13-201ENST00000565545 SOS2Q07890 1332 aaPredicted RBP26.2■■□□□ 1.79
CSPG4P13-201ENST00000565545 PLEKHH1Q9ULM0 1364 aa26.2■■□□□ 1.78
CSPG4P13-201ENST00000565545 NALCNQ8IZF0 1738 aa26.19■■□□□ 1.78
CSPG4P13-201ENST00000565545 MINK1Q8N4C8 1332 aaPredicted RBP26.19■■□□□ 1.78
CSPG4P13-201ENST00000565545 USP21Q9UK80 565 aa26.19■■□□□ 1.78
CSPG4P13-201ENST00000565545 RGS12O14924 1447 aa26.18■■□□□ 1.78
CSPG4P13-201ENST00000565545 ATAD2Q6PL18 1390 aa26.16■■□□□ 1.78
CSPG4P13-201ENST00000565545 NINLQ9Y2I6 1382 aa26.16■■□□□ 1.78
CSPG4P13-201ENST00000565545 ADGRB2O60241 1585 aa26.16■■□□□ 1.78
CSPG4P13-201ENST00000565545 ESCO1Q5FWF5 840 aa26.15■■□□□ 1.78
CSPG4P13-201ENST00000565545 PANK3Q9H999 370 aa26.15■■□□□ 1.78
CSPG4P13-201ENST00000565545 TRPC5Q9UL62 973 aaPredicted RBP26.15■■□□□ 1.78
CSPG4P13-201ENST00000565545 SRPK2P78362 688 aaKnown RBP26.13■■□□□ 1.77
CSPG4P13-201ENST00000565545 CDK19Q9BWU1 502 aa26.13■■□□□ 1.77
CSPG4P13-201ENST00000565545 PER1O15534 1290 aaPredicted RBP26.12■■□□□ 1.77
CSPG4P13-201ENST00000565545 WASLO00401 505 aaPredicted RBP26.11■■□□□ 1.77
CSPG4P13-201ENST00000565545 CABP2Q9NPB3 220 aa26.11■■□□□ 1.77
CSPG4P13-201ENST00000565545 FNBP4Q8N3X1 1017 aaPredicted RBP26.1■■□□□ 1.77
CSPG4P13-201ENST00000565545 NPHP3Q7Z494 1330 aa26.1■■□□□ 1.77
CSPG4P13-201ENST00000565545 KTN1Q86UP2 1357 aaKnown RBP26.09■■□□□ 1.77
CSPG4P13-201ENST00000565545 CCER2I3L3R5 266 aa26.09■■□□□ 1.77
CSPG4P13-201ENST00000565545 FOXO3O43524 673 aa26.08■■□□□ 1.77
CSPG4P13-201ENST00000565545 PRKRIP1Q9H875 184 aaPredicted RBP26.08■■□□□ 1.77
CSPG4P13-201ENST00000565545 XPCQ01831 940 aaPredicted RBP26.07■■□□□ 1.76
CSPG4P13-201ENST00000565545 NUTM2FA1L443 756 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms