RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 COG6Q9Y2V7 657 aa9.44□□□□□ -0.9
CDH1-207ENST00000564745 BCAMP50895 628 aa9.43□□□□□ -0.9
CDH1-207ENST00000564745 APBB1O00213 710 aa9.42□□□□□ -0.9
CDH1-207ENST00000564745 USP17L8P0C7I0 530 aa9.42□□□□□ -0.9
CDH1-207ENST00000564745 ATP6V1AP38606 617 aa9.42□□□□□ -0.9
CDH1-207ENST00000564745 RNF166Q96A37 237 aaPredicted RBP9.42□□□□□ -0.9
CDH1-207ENST00000564745 CFAP99D6REC4 459 aa9.41□□□□□ -0.9
CDH1-207ENST00000564745 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
CDH1-207ENST00000564745 MTMR2Q13614 643 aa9.41□□□□□ -0.9
CDH1-207ENST00000564745 PROSER2Q86WR7 435 aaPredicted RBP9.41□□□□□ -0.9
CDH1-207ENST00000564745 FNBP4Q8N3X1 1017 aaPredicted RBP9.41□□□□□ -0.9
CDH1-207ENST00000564745 ARID3AQ99856 593 aa9.41□□□□□ -0.9
CDH1-207ENST00000564745 CTDSPL2Q05D32 466 aa9.4□□□□□ -0.9
CDH1-207ENST00000564745 GDPD2Q9HCC8 539 aa9.4□□□□□ -0.9
CDH1-207ENST00000564745 ACTN4O43707 911 aaKnown RBP9.39□□□□□ -0.91
CDH1-207ENST00000564745 RAD21O60216 631 aa9.39□□□□□ -0.91
CDH1-207ENST00000564745 KMT5BQ4FZB7 885 aa9.39□□□□□ -0.91
CDH1-207ENST00000564745 MORN1Q5T089 497 aa9.39□□□□□ -0.91
CDH1-207ENST00000564745 ANKK1Q8NFD2 765 aa9.39□□□□□ -0.91
CDH1-207ENST00000564745 TSC1Q92574 1164 aa9.39□□□□□ -0.91
CDH1-207ENST00000564745 HMX1Q9NP08 348 aaPredicted RBP9.39□□□□□ -0.91
CDH1-207ENST00000564745 ZNF777Q9ULD5 760 aaPredicted RBP9.39□□□□□ -0.91
CDH1-207ENST00000564745 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
CDH1-207ENST00000564745 SOWAHBA6NEL2 793 aa9.38□□□□□ -0.91
CDH1-207ENST00000564745 GOLGA8CPA6NN73 597 aa9.38□□□□□ -0.91
CDH1-207ENST00000564745 APLP1P51693 650 aa9.38□□□□□ -0.91
CDH1-207ENST00000564745 GRIPAP1Q4V328 841 aa9.38□□□□□ -0.91
CDH1-207ENST00000564745 STAC3Q96MF2 364 aa9.38□□□□□ -0.91
CDH1-207ENST00000564745 ARXQ96QS3 562 aa9.38□□□□□ -0.91
CDH1-207ENST00000564745 SLC27A5Q9Y2P5 690 aa9.38□□□□□ -0.91
CDH1-207ENST00000564745 LRRN4Q8WUT4 740 aa9.37□□□□□ -0.91
CDH1-207ENST00000564745 WNT2BQ93097 391 aa9.37□□□□□ -0.91
CDH1-207ENST00000564745 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
CDH1-207ENST00000564745 PPP4CP60510 307 aa9.36□□□□□ -0.91
CDH1-207ENST00000564745 GJD4Q96KN9 370 aaPredicted RBP9.36□□□□□ -0.91
CDH1-207ENST00000564745 RNF19BQ6ZMZ0 732 aa9.35□□□□□ -0.91
CDH1-207ENST00000564745 MYT1LQ9UL68 1186 aa9.35□□□□□ -0.91
CDH1-207ENST00000564745 ABL2P42684 1182 aa9.34□□□□□ -0.91
CDH1-207ENST00000564745 BLOC1S3Q6QNY0 202 aa9.34□□□□□ -0.91
CDH1-207ENST00000564745 PRR7Q8TB68 274 aa9.34□□□□□ -0.91
CDH1-207ENST00000564745 TSR3Q9UJK0 312 aaKnown RBP9.34□□□□□ -0.91
CDH1-207ENST00000564745 PER1O15534 1290 aaPredicted RBP9.33□□□□□ -0.92
CDH1-207ENST00000564745 EPS8L1Q8TE68 723 aa9.33□□□□□ -0.92
CDH1-207ENST00000564745 TRIM34Q9BYJ4 488 aa9.33□□□□□ -0.92
CDH1-207ENST00000564745 WBP1LQ9NX94 342 aa9.33□□□□□ -0.92
CDH1-207ENST00000564745 HOMEZQ8IX15 550 aa9.32□□□□□ -0.92
CDH1-207ENST00000564745 CCDC82Q8N4S0 544 aa9.32□□□□□ -0.92
CDH1-207ENST00000564745 HELBQ8NG08 1087 aaPredicted RBP9.32□□□□□ -0.92
CDH1-207ENST00000564745 GPR37L1O60883 481 aa9.31□□□□□ -0.92
CDH1-207ENST00000564745 RETREG3Q86VR2 466 aa9.31□□□□□ -0.92
CDH1-207ENST00000564745 NECTIN2Q92692 538 aa9.31□□□□□ -0.92
CDH1-207ENST00000564745 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
CDH1-207ENST00000564745 SOCS7O14512 581 aa9.3□□□□□ -0.92
CDH1-207ENST00000564745 SCUBE3Q8IX30 993 aa9.3□□□□□ -0.92
CDH1-207ENST00000564745 PCDHB3Q9Y5E6 796 aa9.3□□□□□ -0.92
CDH1-207ENST00000564745 POM121CA8CG34 1229 aa9.29□□□□□ -0.92
CDH1-207ENST00000564745 IRF5Q13568 498 aa9.29□□□□□ -0.92
CDH1-207ENST00000564745 BRICD5Q6PL45 260 aa9.29□□□□□ -0.92
CDH1-207ENST00000564745 PRR14Q9BWN1 585 aa9.29□□□□□ -0.92
CDH1-207ENST00000564745 Q3C1V9 767 aa9.28□□□□□ -0.92
CDH1-207ENST00000564745 THSD4Q6ZMP0 1018 aa9.28□□□□□ -0.92
CDH1-207ENST00000564745 KCTD12Q96CX2 325 aaKnown RBP9.28□□□□□ -0.92
CDH1-207ENST00000564745 THAP11Q96EK4 314 aa9.28□□□□□ -0.92
CDH1-207ENST00000564745 NDUFB9Q9Y6M9 179 aa9.28□□□□□ -0.92
CDH1-207ENST00000564745 NR6A1Q15406 480 aa9.27□□□□□ -0.93
CDH1-207ENST00000564745 COPS2P61201 443 aa9.26□□□□□ -0.93
CDH1-207ENST00000564745 USB1Q9BQ65 265 aaKnown RBP9.26□□□□□ -0.93
CDH1-207ENST00000564745 NR1I2O75469 434 aa9.24□□□□□ -0.93
CDH1-207ENST00000564745 PRM3Q9NNZ6 103 aa9.24□□□□□ -0.93
CDH1-207ENST00000564745 FMNL1O95466 1100 aaPredicted RBP9.23□□□□□ -0.93
CDH1-207ENST00000564745 DESI1Q6ICB0 168 aa9.23□□□□□ -0.93
CDH1-207ENST00000564745 LYPD8Q6UX82 237 aa9.23□□□□□ -0.93
CDH1-207ENST00000564745 SALL2Q9Y467 1007 aaPredicted RBP9.23□□□□□ -0.93
CDH1-207ENST00000564745 FAM160A2Q8N612 972 aaPredicted RBP9.22□□□□□ -0.93
CDH1-207ENST00000564745 TLL1O43897 1013 aa9.21□□□□□ -0.94
CDH1-207ENST00000564745 PTPN5P54829 565 aa9.21□□□□□ -0.94
CDH1-207ENST00000564745 VAC14Q08AM6 782 aa9.21□□□□□ -0.94
CDH1-207ENST00000564745 ADAMTS19Q8TE59 1207 aa9.21□□□□□ -0.94
CDH1-207ENST00000564745 PRDM9Q9NQV7 894 aa9.21□□□□□ -0.94
CDH1-207ENST00000564745 WWC1Q8IX03 1113 aa9.2□□□□□ -0.94
CDH1-207ENST00000564745 GLMNQ92990 594 aa9.2□□□□□ -0.94
CDH1-207ENST00000564745 MAP10Q9P2G4 905 aa9.2□□□□□ -0.94
CDH1-207ENST00000564745 JUNDP17535 347 aa9.19□□□□□ -0.94
CDH1-207ENST00000564745 CCDC97Q96F63 343 aaPredicted RBP9.19□□□□□ -0.94
CDH1-207ENST00000564745 SPSB2Q99619 263 aa9.19□□□□□ -0.94
CDH1-207ENST00000564745 F12P00748 615 aaPredicted RBP9.18□□□□□ -0.94
CDH1-207ENST00000564745 ZNF516Q92618 1163 aa9.18□□□□□ -0.94
CDH1-207ENST00000564745 CALR3Q96L12 384 aaKnown RBP9.18□□□□□ -0.94
CDH1-207ENST00000564745 MTRQ99707 1265 aa9.18□□□□□ -0.94
CDH1-207ENST00000564745 HDGFL1Q5TGJ6 251 aa9.17□□□□□ -0.94
CDH1-207ENST00000564745 SERPINA10Q9UK55 444 aa9.17□□□□□ -0.94
CDH1-207ENST00000564745 ZPR1O75312 459 aa9.16□□□□□ -0.94
CDH1-207ENST00000564745 DXOO77932 396 aaKnown RBP9.15□□□□□ -0.94
CDH1-207ENST00000564745 PTPRNQ16849 979 aa9.15□□□□□ -0.94
CDH1-207ENST00000564745 WASHC4Q2M389 1173 aa9.15□□□□□ -0.94
CDH1-207ENST00000564745 MSS51Q4VC12 460 aa9.15□□□□□ -0.94
CDH1-207ENST00000564745 TJAP1Q5JTD0 557 aa9.15□□□□□ -0.94
CDH1-207ENST00000564745 CTHP32929 405 aa9.13□□□□□ -0.95
CDH1-207ENST00000564745 MMP16P51512 607 aa9.13□□□□□ -0.95
CDH1-207ENST00000564745 HCSTQ9UBK5 93 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms