RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 ADGRL1O94910 1474 aa16.06■□□□□ 0.16
CCDC187-201ENST00000563590 CGNL1Q0VF96 1302 aa16.06■□□□□ 0.16
CCDC187-201ENST00000563590 GRPEL1Q9HAV7 217 aa16.06■□□□□ 0.16
CCDC187-201ENST00000563590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCDC187-201ENST00000563590 MRE11P49959 708 aa16.05■□□□□ 0.16
CCDC187-201ENST00000563590 ANTXR1Q9H6X2 564 aa16.05■□□□□ 0.16
CCDC187-201ENST00000563590 CENPJQ9HC77 1338 aaPredicted RBP16.05■□□□□ 0.16
CCDC187-201ENST00000563590 FTSJ3Q8IY81 847 aaKnown RBP16.05■□□□□ 0.16
CCDC187-201ENST00000563590 CLCN1P35523 988 aa16.05■□□□□ 0.16
CCDC187-201ENST00000563590 MORC1Q86VD1 984 aa16.05■□□□□ 0.16
CCDC187-201ENST00000563590 CHMP5Q9NZZ3 219 aa16.03■□□□□ 0.16
CCDC187-201ENST00000563590 PDE3AQ14432 1141 aa16.03■□□□□ 0.16
CCDC187-201ENST00000563590 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
CCDC187-201ENST00000563590 LAMC1P11047 1609 aa16.03■□□□□ 0.16
CCDC187-201ENST00000563590 SRPK2P78362 688 aaKnown RBP16.02■□□□□ 0.16
CCDC187-201ENST00000563590 NLRP1Q9C000 1473 aa16.02■□□□□ 0.15
CCDC187-201ENST00000563590 PIK3C2GO75747 1445 aa16.02■□□□□ 0.15
CCDC187-201ENST00000563590 U2AF1L5P0DN76 240 aaPredicted RBP16.02■□□□□ 0.15
CCDC187-201ENST00000563590 U2AF1Q01081 240 aaKnown RBP eCLIP16.02■□□□□ 0.15
CCDC187-201ENST00000563590 PDZRN3Q9UPQ7 1066 aa16.02■□□□□ 0.15
CCDC187-201ENST00000563590 ELL2O00472 640 aaPredicted RBP16.01■□□□□ 0.15
CCDC187-201ENST00000563590 TTC37Q6PGP7 1564 aa16.01■□□□□ 0.15
CCDC187-201ENST00000563590 C22orf23Q9BZE7 217 aa16.01■□□□□ 0.15
CCDC187-201ENST00000563590 TNNQ9UQP3 1299 aa16.01■□□□□ 0.15
CCDC187-201ENST00000563590 CLASP1Q7Z460 1538 aa16.01■□□□□ 0.15
CCDC187-201ENST00000563590 EIF2AK4Q9P2K8 1649 aaKnown RBP16■□□□□ 0.15
CCDC187-201ENST00000563590 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
CCDC187-201ENST00000563590 TBC1D32Q96NH3 1257 aa16■□□□□ 0.15
CCDC187-201ENST00000563590 R3HCC1Q9Y3T6 440 aaKnown RBP16■□□□□ 0.15
CCDC187-201ENST00000563590 ASXL1Q8IXJ9 1541 aa16■□□□□ 0.15
CCDC187-201ENST00000563590 CDCA8Q53HL2 280 aa16■□□□□ 0.15
CCDC187-201ENST00000563590 PCDHB15Q9Y5E8 787 aa15.99■□□□□ 0.15
CCDC187-201ENST00000563590 DNTTIP2Q5QJE6 756 aaKnown RBP15.98■□□□□ 0.15
CCDC187-201ENST00000563590 SLC12A5Q9H2X9 1139 aa15.98■□□□□ 0.15
CCDC187-201ENST00000563590 MYO5CQ9NQX4 1742 aa15.97■□□□□ 0.15
CCDC187-201ENST00000563590 RLBP1P12271 317 aa15.97■□□□□ 0.15
CCDC187-201ENST00000563590 RWDD1Q9H446 243 aaPredicted RBP15.97■□□□□ 0.15
CCDC187-201ENST00000563590 SAMD9LQ8IVG5 1584 aa15.97■□□□□ 0.15
CCDC187-201ENST00000563590 ZCCHC11Q5TAX3 1644 aaKnown RBP15.97■□□□□ 0.15
CCDC187-201ENST00000563590 DDX11L8A8MPP1 907 aa15.97■□□□□ 0.15
CCDC187-201ENST00000563590 GOLGA6L22H0YM25 854 aa15.97■□□□□ 0.15
CCDC187-201ENST00000563590 WWC1Q8IX03 1113 aa15.97■□□□□ 0.15
CCDC187-201ENST00000563590 PMFBP1Q8TBY8 1022 aa15.97■□□□□ 0.15
CCDC187-201ENST00000563590 APBB1O00213 710 aa15.96■□□□□ 0.15
CCDC187-201ENST00000563590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.96■□□□□ 0.15
CCDC187-201ENST00000563590 GBP4Q96PP9 640 aa15.96■□□□□ 0.15
CCDC187-201ENST00000563590 PRDM10Q9NQV6 1147 aa15.96■□□□□ 0.15
CCDC187-201ENST00000563590 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.15
CCDC187-201ENST00000563590 DDX49Q9Y6V7 483 aaKnown RBP15.95■□□□□ 0.14
CCDC187-201ENST00000563590 FBLN1P23142 703 aa15.94■□□□□ 0.14
CCDC187-201ENST00000563590 FSD2A1L4K1 749 aa15.94■□□□□ 0.14
CCDC187-201ENST00000563590 PTMAP06454 111 aaKnown RBP15.94■□□□□ 0.14
CCDC187-201ENST00000563590 RARSP54136 660 aaKnown RBP15.94■□□□□ 0.14
CCDC187-201ENST00000563590 ITPRIPQ8IWB1 547 aa15.94■□□□□ 0.14
CCDC187-201ENST00000563590 FOXD4L5Q5VV16 416 aaPredicted RBP15.93■□□□□ 0.14
CCDC187-201ENST00000563590 FOXD4L4Q8WXT5 416 aaPredicted RBP15.93■□□□□ 0.14
CCDC187-201ENST00000563590 NINLQ9Y2I6 1382 aa15.93■□□□□ 0.14
CCDC187-201ENST00000563590 UHRF1BP1LA0JNW5 1464 aa15.93■□□□□ 0.14
CCDC187-201ENST00000563590 UNC13BO14795 1591 aa15.92■□□□□ 0.14
CCDC187-201ENST00000563590 SYNMO15061 1565 aa15.92■□□□□ 0.14
CCDC187-201ENST00000563590 NASPP49321 788 aaPredicted RBP15.92■□□□□ 0.14
CCDC187-201ENST00000563590 ERBB4Q15303 1308 aa15.92■□□□□ 0.14
CCDC187-201ENST00000563590 MPNDQ8N594 471 aa15.92■□□□□ 0.14
CCDC187-201ENST00000563590 CABP2Q9NPB3 220 aa15.92■□□□□ 0.14
CCDC187-201ENST00000563590 RNF17Q9BXT8 1623 aaKnown RBP15.92■□□□□ 0.14
CCDC187-201ENST00000563590 MINK1Q8N4C8 1332 aaPredicted RBP15.92■□□□□ 0.14
CCDC187-201ENST00000563590 CARD14Q9BXL6 1004 aa15.91■□□□□ 0.14
CCDC187-201ENST00000563590 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
CCDC187-201ENST00000563590 SHROOM2Q13796 1616 aa15.91■□□□□ 0.14
CCDC187-201ENST00000563590 SCAF11Q99590 1463 aaKnown RBP15.91■□□□□ 0.14
CCDC187-201ENST00000563590 GGNBP2Q9H3C7 697 aa15.9■□□□□ 0.14
CCDC187-201ENST00000563590 TPM2P07951 284 aa15.89■□□□□ 0.13
CCDC187-201ENST00000563590 NGEFQ8N5V2 710 aa15.89■□□□□ 0.13
CCDC187-201ENST00000563590 ZHX1Q9UKY1 873 aaPredicted RBP15.89■□□□□ 0.13
CCDC187-201ENST00000563590 CDC42BPBQ9Y5S2 1711 aa15.88■□□□□ 0.13
CCDC187-201ENST00000563590 FBXO31Q5XUX0 539 aaPredicted RBP15.88■□□□□ 0.13
CCDC187-201ENST00000563590 IQGAP3Q86VI3 1631 aa15.88■□□□□ 0.13
CCDC187-201ENST00000563590 LNPKQ9C0E8 428 aa15.88■□□□□ 0.13
CCDC187-201ENST00000563590 ATP10AO60312 1499 aa15.88■□□□□ 0.13
CCDC187-201ENST00000563590 TCP11L2Q8N4U5 519 aa15.88■□□□□ 0.13
CCDC187-201ENST00000563590 PDCL3Q9H2J4 239 aa15.88■□□□□ 0.13
CCDC187-201ENST00000563590 XPCQ01831 940 aaPredicted RBP15.87■□□□□ 0.13
CCDC187-201ENST00000563590 TNPO1Q92973 898 aaKnown RBP15.87■□□□□ 0.13
CCDC187-201ENST00000563590 SMC4Q9NTJ3 1288 aa15.86■□□□□ 0.13
CCDC187-201ENST00000563590 IQGAP1P46940 1657 aa15.86■□□□□ 0.13
CCDC187-201ENST00000563590 MADDQ8WXG6 1647 aa15.86■□□□□ 0.13
CCDC187-201ENST00000563590 PLCB2Q00722 1185 aa15.86■□□□□ 0.13
CCDC187-201ENST00000563590 GAS2L3Q86XJ1 694 aa15.86■□□□□ 0.13
CCDC187-201ENST00000563590 TSR2Q969E8 191 aaKnown RBP15.86■□□□□ 0.13
CCDC187-201ENST00000563590 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
CCDC187-201ENST00000563590 MTHFSP49914 203 aa15.85■□□□□ 0.13
CCDC187-201ENST00000563590 FOXD4L6Q3SYB3 417 aaPredicted RBP15.85■□□□□ 0.13
CCDC187-201ENST00000563590 FOXD4L3Q6VB84 417 aaPredicted RBP15.85■□□□□ 0.13
CCDC187-201ENST00000563590 C14orf37Q86TY3 774 aa15.85■□□□□ 0.13
CCDC187-201ENST00000563590 ADGRF5Q8IZF2 1346 aa15.84■□□□□ 0.13
CCDC187-201ENST00000563590 CAVIN1Q6NZI2 390 aaKnown RBP15.84■□□□□ 0.13
CCDC187-201ENST00000563590 MYOM1P52179 1685 aa15.84■□□□□ 0.13
CCDC187-201ENST00000563590 CALD1Q05682 793 aaKnown RBP15.84■□□□□ 0.13
CCDC187-201ENST00000563590 MCTP1Q6DN14 999 aa15.84■□□□□ 0.13
CCDC187-201ENST00000563590 RNF214Q8ND24 703 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms