RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
CHRFAM7A-204ENST00000562729 NRXN3Q9Y4C0 1643 aa13.69□□□□□ -0.22
CHRFAM7A-204ENST00000562729 C19orf44Q9H6X5 657 aa13.69□□□□□ -0.22
CHRFAM7A-204ENST00000562729 FAM135BQ49AJ0 1406 aa13.69□□□□□ -0.22
CHRFAM7A-204ENST00000562729 NCOA3Q9Y6Q9 1424 aa13.69□□□□□ -0.22
CHRFAM7A-204ENST00000562729 CHADLQ6NUI6 762 aa13.68□□□□□ -0.22
CHRFAM7A-204ENST00000562729 METP08581 1390 aa13.68□□□□□ -0.22
CHRFAM7A-204ENST00000562729 PPLO60437 1756 aa13.67□□□□□ -0.22
CHRFAM7A-204ENST00000562729 MED1Q15648 1581 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-204ENST00000562729 PTPRUQ92729 1446 aa13.66□□□□□ -0.22
CHRFAM7A-204ENST00000562729 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-204ENST00000562729 XRN1Q8IZH2 1706 aaKnown RBP13.65□□□□□ -0.22
CHRFAM7A-204ENST00000562729 ANKRD30BQ9BXX2 1392 aa13.64□□□□□ -0.23
CHRFAM7A-204ENST00000562729 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
CHRFAM7A-204ENST00000562729 GABBR2O75899 941 aa13.62□□□□□ -0.23
CHRFAM7A-204ENST00000562729 PRR29P0C7W0 189 aa13.62□□□□□ -0.23
CHRFAM7A-204ENST00000562729 ILDR2Q71H61 639 aa13.61□□□□□ -0.23
CHRFAM7A-204ENST00000562729 STK26Q9P289 416 aa13.61□□□□□ -0.23
CHRFAM7A-204ENST00000562729 DCCP43146 1447 aa13.61□□□□□ -0.23
CHRFAM7A-204ENST00000562729 ADGRF5Q8IZF2 1346 aa13.61□□□□□ -0.23
CHRFAM7A-204ENST00000562729 SPATA31E1Q6ZUB1 1445 aa13.6□□□□□ -0.23
CHRFAM7A-204ENST00000562729 ADGRL3Q9HAR2 1447 aa13.59□□□□□ -0.23
CHRFAM7A-204ENST00000562729 IFT172Q9UG01 1749 aa13.59□□□□□ -0.23
CHRFAM7A-204ENST00000562729 PTCH1Q13635 1447 aa13.58□□□□□ -0.24
CHRFAM7A-204ENST00000562729 HRCP23327 699 aa13.58□□□□□ -0.24
CHRFAM7A-204ENST00000562729 SETD1AO15047 1707 aaKnown RBP13.58□□□□□ -0.24
CHRFAM7A-204ENST00000562729 NALCNQ8IZF0 1738 aa13.58□□□□□ -0.24
CHRFAM7A-204ENST00000562729 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-204ENST00000562729 ROBO2Q9HCK4 1378 aa13.57□□□□□ -0.24
CHRFAM7A-204ENST00000562729 JCADQ9P266 1359 aa13.57□□□□□ -0.24
CHRFAM7A-204ENST00000562729 BRINP3Q76B58 766 aa13.56□□□□□ -0.24
CHRFAM7A-204ENST00000562729 TMEM132EQ6IEE7 984 aa13.55□□□□□ -0.24
CHRFAM7A-204ENST00000562729 KDM2AQ9Y2K7 1162 aa13.55□□□□□ -0.24
CHRFAM7A-204ENST00000562729 PIK3C2GO75747 1445 aa13.55□□□□□ -0.24
CHRFAM7A-204ENST00000562729 MST1RQ04912 1400 aa13.55□□□□□ -0.24
CHRFAM7A-204ENST00000562729 ASXL1Q8IXJ9 1541 aa13.54□□□□□ -0.24
CHRFAM7A-204ENST00000562729 SOCS7O14512 581 aa13.54□□□□□ -0.24
CHRFAM7A-204ENST00000562729 DCAF11Q8TEB1 546 aa13.54□□□□□ -0.24
CHRFAM7A-204ENST00000562729 LAMC1P11047 1609 aa13.53□□□□□ -0.24
CHRFAM7A-204ENST00000562729 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
CHRFAM7A-204ENST00000562729 DHX57Q6P158 1386 aaKnown RBP13.53□□□□□ -0.24
CHRFAM7A-204ENST00000562729 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
CHRFAM7A-204ENST00000562729 LRPPRCP42704 1394 aaKnown RBP13.52□□□□□ -0.25
CHRFAM7A-204ENST00000562729 MYOM2P54296 1465 aa13.52□□□□□ -0.25
CHRFAM7A-204ENST00000562729 YTHDC2Q9H6S0 1430 aaKnown RBP13.51□□□□□ -0.25
CHRFAM7A-204ENST00000562729 SPATA31A6Q5VVP1 1343 aa13.51□□□□□ -0.25
CHRFAM7A-204ENST00000562729 NUTM2BA6NNL0 878 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-204ENST00000562729 NUTM2EB1AL46 878 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-204ENST00000562729 CFAP70Q5T0N1 1121 aa13.51□□□□□ -0.25
CHRFAM7A-204ENST00000562729 WAPLQ7Z5K2 1190 aa13.51□□□□□ -0.25
CHRFAM7A-204ENST00000562729 NUTM2AQ8IVF1 878 aaPredicted RBP13.51□□□□□ -0.25
CHRFAM7A-204ENST00000562729 C1orf167Q5SNV9 1468 aa13.5□□□□□ -0.25
CHRFAM7A-204ENST00000562729 PRAG1Q86YV5 1406 aa13.5□□□□□ -0.25
CHRFAM7A-204ENST00000562729 ESCO1Q5FWF5 840 aa13.5□□□□□ -0.25
CHRFAM7A-204ENST00000562729 LRRC59Q96AG4 307 aaKnown RBP13.5□□□□□ -0.25
CHRFAM7A-204ENST00000562729 C14orf93Q9H972 538 aaKnown RBP13.5□□□□□ -0.25
CHRFAM7A-204ENST00000562729 POGKQ9P215 609 aa13.5□□□□□ -0.25
CHRFAM7A-204ENST00000562729 KNDC1Q76NI1 1749 aa13.5□□□□□ -0.25
CHRFAM7A-204ENST00000562729 ABCC11Q96J66 1382 aa13.49□□□□□ -0.25
CHRFAM7A-204ENST00000562729 NUTM2FA1L443 756 aa13.49□□□□□ -0.25
CHRFAM7A-204ENST00000562729 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
CHRFAM7A-204ENST00000562729 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHRFAM7A-204ENST00000562729 DDX17Q92841 729 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-204ENST00000562729 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
CHRFAM7A-204ENST00000562729 ORAI2Q96SN7 254 aa13.48□□□□□ -0.25
CHRFAM7A-204ENST00000562729 NHSL1Q5SYE7 1610 aa13.48□□□□□ -0.25
CHRFAM7A-204ENST00000562729 CDC42BPGQ6DT37 1551 aa13.48□□□□□ -0.25
CHRFAM7A-204ENST00000562729 TECPR2O15040 1411 aa13.47□□□□□ -0.25
CHRFAM7A-204ENST00000562729 NRXN1Q9ULB1 1477 aa13.47□□□□□ -0.25
CHRFAM7A-204ENST00000562729 PRAM1Q96QH2 718 aa13.46□□□□□ -0.25
CHRFAM7A-204ENST00000562729 PLEKHH1Q9ULM0 1364 aa13.45□□□□□ -0.26
CHRFAM7A-204ENST00000562729 TRAK1Q9UPV9 953 aa13.45□□□□□ -0.26
CHRFAM7A-204ENST00000562729 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
CHRFAM7A-204ENST00000562729 SIRT1Q96EB6 747 aa13.44□□□□□ -0.26
CHRFAM7A-204ENST00000562729 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
CHRFAM7A-204ENST00000562729 ZNF772Q68DY9 489 aaPredicted RBP13.43□□□□□ -0.26
CHRFAM7A-204ENST00000562729 RGS17Q9UGC6 210 aaPredicted RBP13.43□□□□□ -0.26
CHRFAM7A-204ENST00000562729 FOXO3O43524 673 aa13.42□□□□□ -0.26
CHRFAM7A-204ENST00000562729 LHX8Q68G74 356 aa13.42□□□□□ -0.26
CHRFAM7A-204ENST00000562729 LRP6O75581 1613 aa13.42□□□□□ -0.26
CHRFAM7A-204ENST00000562729 ADAMTS2O95450 1211 aa13.41□□□□□ -0.26
CHRFAM7A-204ENST00000562729 CD44P16070 742 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-204ENST00000562729 XPCQ01831 940 aaPredicted RBP13.41□□□□□ -0.26
CHRFAM7A-204ENST00000562729 C8orf37Q96NL8 207 aa13.41□□□□□ -0.26
CHRFAM7A-204ENST00000562729 PNPLA6Q8IY17 1366 aa13.41□□□□□ -0.26
CHRFAM7A-204ENST00000562729 FMN2Q9NZ56 1722 aa13.41□□□□□ -0.26
CHRFAM7A-204ENST00000562729 POTEAQ6S8J7 498 aa13.4□□□□□ -0.26
CHRFAM7A-204ENST00000562729 SOS2Q07890 1332 aaPredicted RBP13.39□□□□□ -0.27
CHRFAM7A-204ENST00000562729 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
CHRFAM7A-204ENST00000562729 DLC1Q96QB1 1528 aa13.39□□□□□ -0.27
CHRFAM7A-204ENST00000562729 NEUROD1Q13562 356 aa13.39□□□□□ -0.27
CHRFAM7A-204ENST00000562729 HIRIP3Q9BW71 556 aaPredicted RBP13.39□□□□□ -0.27
CHRFAM7A-204ENST00000562729 KIF1AQ12756 1690 aa13.39□□□□□ -0.27
CHRFAM7A-204ENST00000562729 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
CHRFAM7A-204ENST00000562729 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
CHRFAM7A-204ENST00000562729 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
CHRFAM7A-204ENST00000562729 PSME1Q06323 249 aa13.38□□□□□ -0.27
CHRFAM7A-204ENST00000562729 NGLY1Q96IV0 654 aa13.38□□□□□ -0.27
CHRFAM7A-204ENST00000562729 AFF2P51816 1311 aa13.38□□□□□ -0.27
CHRFAM7A-204ENST00000562729 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms