RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 KDM5CP41229 1560 aa10.09□□□□□ -0.79
CFDP1-202ENST00000562602 ZNF687Q8N1G0 1237 aa10.09□□□□□ -0.79
CFDP1-202ENST00000562602 TMC1Q8TDI8 760 aa10.08□□□□□ -0.8
CFDP1-202ENST00000562602 NUDCQ9Y266 331 aa10.08□□□□□ -0.8
CFDP1-202ENST00000562602 CCDC144AA2RUR9 1427 aa10.07□□□□□ -0.8
CFDP1-202ENST00000562602 SLC34A2O95436 690 aa10.07□□□□□ -0.8
CFDP1-202ENST00000562602 PREX2Q70Z35 1606 aa10.07□□□□□ -0.8
CFDP1-202ENST00000562602 MYBBP1AQ9BQG0 1328 aaKnown RBP10.07□□□□□ -0.8
CFDP1-202ENST00000562602 ATP10AO60312 1499 aa10.06□□□□□ -0.8
CFDP1-202ENST00000562602 GPRASP1Q5JY77 1395 aa10.06□□□□□ -0.8
CFDP1-202ENST00000562602 SLC24A1O60721 1099 aa10.06□□□□□ -0.8
CFDP1-202ENST00000562602 HNRNPMP52272 730 aaKnown RBP eCLIP10.06□□□□□ -0.8
CFDP1-202ENST00000562602 PDE3BQ13370 1112 aa10.06□□□□□ -0.8
CFDP1-202ENST00000562602 ZNF326Q5BKZ1 582 aaKnown RBP10.06□□□□□ -0.8
CFDP1-202ENST00000562602 MYT1LQ9UL68 1186 aa10.06□□□□□ -0.8
CFDP1-202ENST00000562602 FAM135AQ9P2D6 1515 aa10.06□□□□□ -0.8
CFDP1-202ENST00000562602 RNF123Q5XPI4 1314 aa10.06□□□□□ -0.8
CFDP1-202ENST00000562602 CCDC184Q52MB2 194 aa10.05□□□□□ -0.8
CFDP1-202ENST00000562602 TMC2Q8TDI7 906 aa10.05□□□□□ -0.8
CFDP1-202ENST00000562602 DCAF11Q8TEB1 546 aa10.05□□□□□ -0.8
CFDP1-202ENST00000562602 PNISRQ8TF01 805 aaKnown RBP10.05□□□□□ -0.8
CFDP1-202ENST00000562602 ZMYM4Q5VZL5 1548 aa10.05□□□□□ -0.8
CFDP1-202ENST00000562602 ERBINQ96RT1 1412 aa10.05□□□□□ -0.8
CFDP1-202ENST00000562602 PCDHGA4Q9Y5G9 962 aa10.04□□□□□ -0.8
CFDP1-202ENST00000562602 PLXNC1O60486 1568 aa10.04□□□□□ -0.8
CFDP1-202ENST00000562602 LAMC1P11047 1609 aa10.04□□□□□ -0.8
CFDP1-202ENST00000562602 CLASP1Q7Z460 1538 aa10.03□□□□□ -0.8
CFDP1-202ENST00000562602 DUOX2Q9NRD8 1548 aa10.03□□□□□ -0.8
CFDP1-202ENST00000562602 UNC13BO14795 1591 aa10.03□□□□□ -0.8
CFDP1-202ENST00000562602 NUDT7P0C024 238 aa10.03□□□□□ -0.8
CFDP1-202ENST00000562602 NLRP13Q86W25 1043 aa10.03□□□□□ -0.8
CFDP1-202ENST00000562602 PRAG1Q86YV5 1406 aa10.03□□□□□ -0.8
CFDP1-202ENST00000562602 EIF2AK4Q9P2K8 1649 aaKnown RBP10.03□□□□□ -0.8
CFDP1-202ENST00000562602 LRPPRCP42704 1394 aaKnown RBP10.02□□□□□ -0.8
CFDP1-202ENST00000562602 SAMD9LQ8IVG5 1584 aa10.02□□□□□ -0.81
CFDP1-202ENST00000562602 ST20-MTHFSA0A0A6YYL1 179 aa10.02□□□□□ -0.81
CFDP1-202ENST00000562602 KDM4FA0A1W2PPD8 638 aa10.02□□□□□ -0.81
CFDP1-202ENST00000562602 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
CFDP1-202ENST00000562602 EFCAB2Q5VUJ9 269 aa10.02□□□□□ -0.81
CFDP1-202ENST00000562602 SHROOM2Q13796 1616 aa10.02□□□□□ -0.81
CFDP1-202ENST00000562602 UHRF1BP1LA0JNW5 1464 aa10.02□□□□□ -0.81
CFDP1-202ENST00000562602 ARHGAP5Q13017 1502 aa10.02□□□□□ -0.81
CFDP1-202ENST00000562602 ABCC2Q92887 1545 aa10.02□□□□□ -0.81
CFDP1-202ENST00000562602 GPHNQ9NQX3 736 aaPredicted RBP10.01□□□□□ -0.81
CFDP1-202ENST00000562602 RTEL1-TNFRSF6BF6WH68 1400 aa10□□□□□ -0.81
CFDP1-202ENST00000562602 PLCH2O75038 1416 aa10□□□□□ -0.81
CFDP1-202ENST00000562602 BCORL1Q5H9F3 1711 aa10□□□□□ -0.81
CFDP1-202ENST00000562602 FOXK1P85037 733 aa10□□□□□ -0.81
CFDP1-202ENST00000562602 POTEEQ6S8J3 1075 aa10□□□□□ -0.81
CFDP1-202ENST00000562602 ERICH6Q7L0X2 663 aa10□□□□□ -0.81
CFDP1-202ENST00000562602 POLR3GLQ9BT43 218 aa10□□□□□ -0.81
CFDP1-202ENST00000562602 LHX6Q9UPM6 363 aa10□□□□□ -0.81
CFDP1-202ENST00000562602 KDM2AQ9Y2K7 1162 aa10□□□□□ -0.81
CFDP1-202ENST00000562602 IQGAP3Q86VI3 1631 aa10□□□□□ -0.81
CFDP1-202ENST00000562602 MAGI2Q86UL8 1455 aa9.99□□□□□ -0.81
CFDP1-202ENST00000562602 ARAP3Q8WWN8 1544 aa9.99□□□□□ -0.81
CFDP1-202ENST00000562602 IRX6P78412 446 aaPredicted RBP9.99□□□□□ -0.81
CFDP1-202ENST00000562602 TMF1P82094 1093 aa9.99□□□□□ -0.81
CFDP1-202ENST00000562602 PARD3Q8TEW0 1356 aa9.99□□□□□ -0.81
CFDP1-202ENST00000562602 CDC42BPBQ9Y5S2 1711 aa9.99□□□□□ -0.81
CFDP1-202ENST00000562602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.98□□□□□ -0.81
CFDP1-202ENST00000562602 DSG2Q14126 1118 aa9.98□□□□□ -0.81
CFDP1-202ENST00000562602 SYCP2Q9BX26 1530 aa9.97□□□□□ -0.81
CFDP1-202ENST00000562602 PLPP6Q8IY26 295 aa9.97□□□□□ -0.81
CFDP1-202ENST00000562602 PTCD2Q8WV60 388 aaKnown RBP9.97□□□□□ -0.81
CFDP1-202ENST00000562602 RTN4Q9NQC3 1192 aaKnown RBP9.97□□□□□ -0.81
CFDP1-202ENST00000562602 TRPM1Q7Z4N2 1603 aa9.96□□□□□ -0.81
CFDP1-202ENST00000562602 MYO5CQ9NQX4 1742 aa9.96□□□□□ -0.81
CFDP1-202ENST00000562602 CCDC136Q96JN2 1154 aa9.96□□□□□ -0.82
CFDP1-202ENST00000562602 COL17A1Q9UMD9 1497 aaPredicted RBP9.96□□□□□ -0.82
CFDP1-202ENST00000562602 PRDM15P57071 1507 aaPredicted RBP9.96□□□□□ -0.82
CFDP1-202ENST00000562602 GTPBP6O43824 516 aaPredicted RBP9.95□□□□□ -0.82
CFDP1-202ENST00000562602 PLA2R1Q13018 1463 aa9.95□□□□□ -0.82
CFDP1-202ENST00000562602 E9PCH4 1651 aa9.95□□□□□ -0.82
CFDP1-202ENST00000562602 A2MP01023 1474 aa9.94□□□□□ -0.82
CFDP1-202ENST00000562602 KANK1Q14678 1352 aa9.94□□□□□ -0.82
CFDP1-202ENST00000562602 PER1O15534 1290 aaPredicted RBP9.94□□□□□ -0.82
CFDP1-202ENST00000562602 TTC37Q6PGP7 1564 aa9.93□□□□□ -0.82
CFDP1-202ENST00000562602 NEURL4Q96JN8 1562 aa9.93□□□□□ -0.82
CFDP1-202ENST00000562602 WDR7Q9Y4E6 1490 aa9.93□□□□□ -0.82
CFDP1-202ENST00000562602 SCAPERQ9BY12 1400 aa9.93□□□□□ -0.82
CFDP1-202ENST00000562602 EIF3AQ14152 1382 aaKnown RBP9.93□□□□□ -0.82
CFDP1-202ENST00000562602 B4GALNT3Q6L9W6 998 aa9.93□□□□□ -0.82
CFDP1-202ENST00000562602 SPAG9O60271 1321 aaKnown RBP9.92□□□□□ -0.82
CFDP1-202ENST00000562602 AMER1Q5JTC6 1135 aaPredicted RBP9.92□□□□□ -0.82
CFDP1-202ENST00000562602 NGEFQ8N5V2 710 aa9.92□□□□□ -0.82
CFDP1-202ENST00000562602 TESK2Q96S53 571 aa9.92□□□□□ -0.82
CFDP1-202ENST00000562602 CRISPLD2Q9H0B8 497 aa9.92□□□□□ -0.82
CFDP1-202ENST00000562602 PTPRTO14522 1441 aa9.91□□□□□ -0.82
CFDP1-202ENST00000562602 NPC1L1Q9UHC9 1359 aa9.91□□□□□ -0.82
CFDP1-202ENST00000562602 RRP1P56182 461 aaKnown RBP9.91□□□□□ -0.82
CFDP1-202ENST00000562602 RGL3Q3MIN7 710 aa9.91□□□□□ -0.82
CFDP1-202ENST00000562602 RCAN3Q9UKA8 241 aa9.91□□□□□ -0.82
CFDP1-202ENST00000562602 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
CFDP1-202ENST00000562602 ABCC1P33527 1531 aa9.91□□□□□ -0.82
CFDP1-202ENST00000562602 NCKAP5LQ9HCH0 1330 aa9.9□□□□□ -0.82
CFDP1-202ENST00000562602 TCERG1O14776 1098 aaKnown RBP9.9□□□□□ -0.82
CFDP1-202ENST00000562602 MS4A1P11836 297 aa9.9□□□□□ -0.82
CFDP1-202ENST00000562602 ANP32AP39687 249 aaKnown RBP9.9□□□□□ -0.82
CFDP1-202ENST00000562602 ANKRD13DQ6ZTN6 518 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms