RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
CDH13-205ENST00000562307 PLPPR3Q6T4P5 718 aa12.95□□□□□ -0.34
CDH13-205ENST00000562307 NLRP13Q86W25 1043 aa12.95□□□□□ -0.34
CDH13-205ENST00000562307 CARD14Q9BXL6 1004 aa12.95□□□□□ -0.34
CDH13-205ENST00000562307 KNDC1Q76NI1 1749 aa12.95□□□□□ -0.34
CDH13-205ENST00000562307 CPS1P31327 1500 aa12.94□□□□□ -0.34
CDH13-205ENST00000562307 ZNF142P52746 1687 aaPredicted RBP12.94□□□□□ -0.34
CDH13-205ENST00000562307 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDH13-205ENST00000562307 SLC12A5Q9H2X9 1139 aa12.94□□□□□ -0.34
CDH13-205ENST00000562307 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
CDH13-205ENST00000562307 MINK1Q8N4C8 1332 aaPredicted RBP12.93□□□□□ -0.34
CDH13-205ENST00000562307 CC2D1BQ5T0F9 858 aaKnown RBP12.93□□□□□ -0.34
CDH13-205ENST00000562307 WAPLQ7Z5K2 1190 aa12.93□□□□□ -0.34
CDH13-205ENST00000562307 TMC1Q8TDI8 760 aa12.93□□□□□ -0.34
CDH13-205ENST00000562307 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
CDH13-205ENST00000562307 BCANQ96GW7 911 aa12.93□□□□□ -0.34
CDH13-205ENST00000562307 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
CDH13-205ENST00000562307 DIP2AQ14689 1571 aa12.93□□□□□ -0.34
CDH13-205ENST00000562307 PLEKHH1Q9ULM0 1364 aa12.93□□□□□ -0.34
CDH13-205ENST00000562307 SETD1BQ9UPS6 1966 aaKnown RBP12.92□□□□□ -0.34
CDH13-205ENST00000562307 CDK19Q9BWU1 502 aa12.92□□□□□ -0.34
CDH13-205ENST00000562307 ANKRD36BQ8N2N9 1353 aa12.92□□□□□ -0.34
CDH13-205ENST00000562307 PTPRUQ92729 1446 aa12.91□□□□□ -0.34
CDH13-205ENST00000562307 CNGB1Q14028 1251 aaPredicted RBP12.91□□□□□ -0.34
CDH13-205ENST00000562307 PIK3R4Q99570 1358 aa12.91□□□□□ -0.34
CDH13-205ENST00000562307 SRPK2P78362 688 aaKnown RBP12.9□□□□□ -0.34
CDH13-205ENST00000562307 ANKLE2Q86XL3 938 aa12.9□□□□□ -0.34
CDH13-205ENST00000562307 SLC26A8Q96RN1 970 aa12.9□□□□□ -0.34
CDH13-205ENST00000562307 ROBO2Q9HCK4 1378 aa12.9□□□□□ -0.34
CDH13-205ENST00000562307 WASLO00401 505 aaPredicted RBP12.89□□□□□ -0.35
CDH13-205ENST00000562307 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
CDH13-205ENST00000562307 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
CDH13-205ENST00000562307 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
CDH13-205ENST00000562307 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
CDH13-205ENST00000562307 INSRP06213 1382 aa12.88□□□□□ -0.35
CDH13-205ENST00000562307 TERF2IPQ9NYB0 399 aa12.87□□□□□ -0.35
CDH13-205ENST00000562307 AMOTL2Q9Y2J4 779 aa12.87□□□□□ -0.35
CDH13-205ENST00000562307 PTCH1Q13635 1447 aa12.87□□□□□ -0.35
CDH13-205ENST00000562307 CD163L1Q9NR16 1453 aa12.86□□□□□ -0.35
CDH13-205ENST00000562307 NSD2O96028 1365 aa12.86□□□□□ -0.35
CDH13-205ENST00000562307 HNRNPUQ00839 825 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDH13-205ENST00000562307 CGNL1Q0VF96 1302 aa12.86□□□□□ -0.35
CDH13-205ENST00000562307 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
CDH13-205ENST00000562307 A0A1W2PP64 1363 aa12.85□□□□□ -0.35
CDH13-205ENST00000562307 CABP1Q9NZU7 370 aa12.85□□□□□ -0.35
CDH13-205ENST00000562307 XRN1Q8IZH2 1706 aaKnown RBP12.84□□□□□ -0.35
CDH13-205ENST00000562307 ATP7BP35670 1465 aa12.84□□□□□ -0.35
CDH13-205ENST00000562307 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.83□□□□□ -0.36
CDH13-205ENST00000562307 HDGFL2Q7Z4V5 671 aaPredicted RBP12.83□□□□□ -0.36
CDH13-205ENST00000562307 NUDT16Q96DE0 195 aaKnown RBP12.83□□□□□ -0.36
CDH13-205ENST00000562307 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
CDH13-205ENST00000562307 ZBED9Q6R2W3 1325 aa12.83□□□□□ -0.36
CDH13-205ENST00000562307 CPSF1Q10570 1443 aaKnown RBP12.82□□□□□ -0.36
CDH13-205ENST00000562307 NPHP4O75161 1426 aaPredicted RBP12.81□□□□□ -0.36
CDH13-205ENST00000562307 MORC1Q86VD1 984 aa12.81□□□□□ -0.36
CDH13-205ENST00000562307 PRR36Q9H6K5 1346 aa12.8□□□□□ -0.36
CDH13-205ENST00000562307 SCAF1Q9H7N4 1312 aaKnown RBP12.8□□□□□ -0.36
CDH13-205ENST00000562307 POLR3AO14802 1390 aaPredicted RBP12.8□□□□□ -0.36
CDH13-205ENST00000562307 PPIP5K1Q6PFW1 1433 aa12.79□□□□□ -0.36
CDH13-205ENST00000562307 PLEKHG3A1L390 1219 aa12.79□□□□□ -0.36
CDH13-205ENST00000562307 FYB1O15117 783 aa12.79□□□□□ -0.36
CDH13-205ENST00000562307 KCNA6P17658 529 aa12.79□□□□□ -0.36
CDH13-205ENST00000562307 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
CDH13-205ENST00000562307 CDC42BPGQ6DT37 1551 aa12.77□□□□□ -0.36
CDH13-205ENST00000562307 CHD2O14647 1828 aaKnown RBP12.77□□□□□ -0.37
CDH13-205ENST00000562307 KDM4FA0A1W2PPD8 638 aa12.77□□□□□ -0.37
CDH13-205ENST00000562307 GTF3C3Q9Y5Q9 886 aa12.77□□□□□ -0.37
CDH13-205ENST00000562307 BLMP54132 1417 aaPredicted RBP12.77□□□□□ -0.37
CDH13-205ENST00000562307 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
CDH13-205ENST00000562307 ADAMTS8Q9UP79 889 aa12.76□□□□□ -0.37
CDH13-205ENST00000562307 NCKAP5LQ9HCH0 1330 aa12.76□□□□□ -0.37
CDH13-205ENST00000562307 TOPAZ1Q8N9V7 1692 aa12.74□□□□□ -0.37
CDH13-205ENST00000562307 ANKARQ7Z5J8 1434 aa12.74□□□□□ -0.37
CDH13-205ENST00000562307 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
CDH13-205ENST00000562307 MTHFSP49914 203 aa12.73□□□□□ -0.37
CDH13-205ENST00000562307 WDR43Q15061 677 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDH13-205ENST00000562307 ANKRD26Q9UPS8 1709 aa12.73□□□□□ -0.37
CDH13-205ENST00000562307 NWD1Q149M9 1564 aa12.73□□□□□ -0.37
CDH13-205ENST00000562307 MON2Q7Z3U7 1717 aa12.72□□□□□ -0.37
CDH13-205ENST00000562307 AKAP12Q02952 1782 aa12.71□□□□□ -0.37
CDH13-205ENST00000562307 ACEP12821 1306 aa12.71□□□□□ -0.37
CDH13-205ENST00000562307 CFAP53Q96M91 514 aa12.71□□□□□ -0.37
CDH13-205ENST00000562307 SSH2Q76I76 1423 aa12.71□□□□□ -0.38
CDH13-205ENST00000562307 TNNT2P45379 298 aaPredicted RBP12.7□□□□□ -0.38
CDH13-205ENST00000562307 PDE3BQ13370 1112 aa12.7□□□□□ -0.38
CDH13-205ENST00000562307 NKTRP30414 1462 aaKnown RBP12.7□□□□□ -0.38
CDH13-205ENST00000562307 USP6P35125 1406 aa12.7□□□□□ -0.38
CDH13-205ENST00000562307 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
CDH13-205ENST00000562307 ADGRL3Q9HAR2 1447 aa12.7□□□□□ -0.38
CDH13-205ENST00000562307 PNPLA6Q8IY17 1366 aa12.69□□□□□ -0.38
CDH13-205ENST00000562307 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
CDH13-205ENST00000562307 TTC21BQ7Z4L5 1316 aa12.69□□□□□ -0.38
CDH13-205ENST00000562307 FMN2Q9NZ56 1722 aa12.69□□□□□ -0.38
CDH13-205ENST00000562307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDH13-205ENST00000562307 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
CDH13-205ENST00000562307 ITSN1Q15811 1721 aa12.68□□□□□ -0.38
CDH13-205ENST00000562307 NME9Q86XW9 330 aa12.68□□□□□ -0.38
CDH13-205ENST00000562307 NGEFQ8N5V2 710 aa12.68□□□□□ -0.38
CDH13-205ENST00000562307 TTC21AQ8NDW8 1320 aa12.67□□□□□ -0.38
CDH13-205ENST00000562307 NUTM2FA1L443 756 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms