RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ADH1BP00325 375 aa6.24□□□□□ -1.41
SPG11-225ENST00000561391 CFHP08603 1231 aa6.24□□□□□ -1.41
SPG11-225ENST00000561391 NPDC1Q9NQX5 325 aaPredicted RBP6.24□□□□□ -1.41
SPG11-225ENST00000561391 MROH2BQ7Z745 1585 aa6.23□□□□□ -1.41
SPG11-225ENST00000561391 ACTN4O43707 911 aaKnown RBP6.23□□□□□ -1.41
SPG11-225ENST00000561391 GDF9O60383 454 aa6.23□□□□□ -1.41
SPG11-225ENST00000561391 RBM46Q8TBY0 533 aaKnown RBP6.23□□□□□ -1.41
SPG11-225ENST00000561391 AAASQ9NRG9 546 aa6.23□□□□□ -1.41
SPG11-225ENST00000561391 KIF13AQ9H1H9 1805 aa6.22□□□□□ -1.41
SPG11-225ENST00000561391 ADGRL1O94910 1474 aa6.22□□□□□ -1.41
SPG11-225ENST00000561391 CFTRP13569 1480 aa6.22□□□□□ -1.41
SPG11-225ENST00000561391 CLASP1Q7Z460 1538 aa6.22□□□□□ -1.41
SPG11-225ENST00000561391 NR1I2O75469 434 aa6.22□□□□□ -1.41
SPG11-225ENST00000561391 FOXC1Q12948 553 aa6.22□□□□□ -1.41
SPG11-225ENST00000561391 SLC6A16Q9GZN6 736 aa6.22□□□□□ -1.41
SPG11-225ENST00000561391 ARHGEF1Q92888 912 aaKnown RBP6.21□□□□□ -1.42
SPG11-225ENST00000561391 TMEM134Q9H6X4 195 aa6.21□□□□□ -1.42
SPG11-225ENST00000561391 FAM181BA6NEQ2 426 aa6.2□□□□□ -1.42
SPG11-225ENST00000561391 KDM6BO15054 1643 aa6.2□□□□□ -1.42
SPG11-225ENST00000561391 TDRD9Q8NDG6 1382 aaKnown RBP6.19□□□□□ -1.42
SPG11-225ENST00000561391 PRKCSHP14314 528 aaPredicted RBP6.19□□□□□ -1.42
SPG11-225ENST00000561391 PLA2G2CQ5R387 149 aa6.19□□□□□ -1.42
SPG11-225ENST00000561391 SYNJ1O43426 1573 aa6.18□□□□□ -1.42
SPG11-225ENST00000561391 RCCD1A6NED2 376 aa6.18□□□□□ -1.42
SPG11-225ENST00000561391 C11orf95C9JLR9 678 aaPredicted RBP6.18□□□□□ -1.42
SPG11-225ENST00000561391 SEMA3EO15041 775 aa6.18□□□□□ -1.42
SPG11-225ENST00000561391 TPRNQ4KMQ1 711 aa6.18□□□□□ -1.42
SPG11-225ENST00000561391 LMOD2Q6P5Q4 547 aa6.18□□□□□ -1.42
SPG11-225ENST00000561391 TOPBP1Q92547 1522 aa6.18□□□□□ -1.42
SPG11-225ENST00000561391 AXIN1O15169 862 aa6.17□□□□□ -1.42
SPG11-225ENST00000561391 NFX1Q12986 1120 aaKnown RBP6.17□□□□□ -1.42
SPG11-225ENST00000561391 SNAPC4Q5SXM2 1469 aa6.16□□□□□ -1.42
SPG11-225ENST00000561391 CYP4X1Q8N118 509 aa6.16□□□□□ -1.42
SPG11-225ENST00000561391 SPSB2Q99619 263 aa6.16□□□□□ -1.42
SPG11-225ENST00000561391 GMPR2Q9P2T1 348 aaKnown RBP6.16□□□□□ -1.42
SPG11-225ENST00000561391 ADGRG1Q9Y653 693 aa6.16□□□□□ -1.42
SPG11-225ENST00000561391 PTGDRQ13258 359 aa6.15□□□□□ -1.42
SPG11-225ENST00000561391 PUS10Q3MIT2 529 aaKnown RBP6.15□□□□□ -1.42
SPG11-225ENST00000561391 CRIPAKQ8N1N5 446 aa6.15□□□□□ -1.42
SPG11-225ENST00000561391 PKD2L1Q9P0L9 805 aa6.15□□□□□ -1.42
SPG11-225ENST00000561391 DACH1Q9UI36 760 aa6.15□□□□□ -1.42
SPG11-225ENST00000561391 TSPOAP1O95153 1857 aa6.15□□□□□ -1.43
SPG11-225ENST00000561391 ABCC10Q5T3U5 1492 aa6.15□□□□□ -1.43
SPG11-225ENST00000561391 NUTM2FA1L443 756 aa6.14□□□□□ -1.43
SPG11-225ENST00000561391 TULP1O00294 542 aaPredicted RBP6.14□□□□□ -1.43
SPG11-225ENST00000561391 SLC10A3P09131 477 aa6.14□□□□□ -1.43
SPG11-225ENST00000561391 CTC1Q2NKJ3 1217 aa6.14□□□□□ -1.43
SPG11-225ENST00000561391 FAM161AQ3B820 660 aa6.14□□□□□ -1.43
SPG11-225ENST00000561391 RSPH4AQ5TD94 716 aa6.14□□□□□ -1.43
SPG11-225ENST00000561391 SCUBE3Q8IX30 993 aa6.14□□□□□ -1.43
SPG11-225ENST00000561391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.13□□□□□ -1.43
SPG11-225ENST00000561391 CD2BP2O95400 341 aaKnown RBP6.13□□□□□ -1.43
SPG11-225ENST00000561391 MLLT3P42568 568 aaPredicted RBP6.13□□□□□ -1.43
SPG11-225ENST00000561391 RPIAP49247 311 aa6.13□□□□□ -1.43
SPG11-225ENST00000561391 FCF1Q9Y324 198 aaKnown RBP6.13□□□□□ -1.43
SPG11-225ENST00000561391 RAD54L2Q9Y4B4 1467 aa6.13□□□□□ -1.43
SPG11-225ENST00000561391 TARBP1Q13395 1621 aaKnown RBP6.13□□□□□ -1.43
SPG11-225ENST00000561391 TTC24A2A3L6 582 aaPredicted RBP6.12□□□□□ -1.43
SPG11-225ENST00000561391 WIZO95785 1651 aa6.12□□□□□ -1.43
SPG11-225ENST00000561391 AVPP01185 164 aa6.12□□□□□ -1.43
SPG11-225ENST00000561391 TOR4AQ9NXH8 423 aa6.12□□□□□ -1.43
SPG11-225ENST00000561391 ABCC8Q09428 1581 aa6.1□□□□□ -1.43
SPG11-225ENST00000561391 SPATA31D1Q6ZQQ2 1576 aa6.1□□□□□ -1.43
SPG11-225ENST00000561391 SOGA1O94964 1423 aa6.1□□□□□ -1.43
SPG11-225ENST00000561391 TESPA1A2RU30 521 aaPredicted RBP6.1□□□□□ -1.43
SPG11-225ENST00000561391 ZBTB24O43167 697 aaPredicted RBP6.1□□□□□ -1.43
SPG11-225ENST00000561391 SMYD5Q6GMV2 418 aa6.1□□□□□ -1.43
SPG11-225ENST00000561391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.1□□□□□ -1.43
SPG11-225ENST00000561391 RDH13Q8NBN7 331 aa6.09□□□□□ -1.43
SPG11-225ENST00000561391 FCHSD2O94868 740 aa6.08□□□□□ -1.44
SPG11-225ENST00000561391 OATP04181 439 aa6.08□□□□□ -1.44
SPG11-225ENST00000561391 SMCPP49901 116 aaPredicted RBP6.08□□□□□ -1.44
SPG11-225ENST00000561391 MAGI1Q96QZ7 1491 aaPredicted RBP6.08□□□□□ -1.44
SPG11-225ENST00000561391 DIP2BQ9P265 1576 aa6.07□□□□□ -1.44
SPG11-225ENST00000561391 FMNL1O95466 1100 aaPredicted RBP6.07□□□□□ -1.44
SPG11-225ENST00000561391 PXYLP1Q8TE99 480 aa6.07□□□□□ -1.44
SPG11-225ENST00000561391 POLA1P09884 1462 aaPredicted RBP6.07□□□□□ -1.44
SPG11-225ENST00000561391 DNMBPQ6XZF7 1577 aa6.06□□□□□ -1.44
SPG11-225ENST00000561391 RBM26Q5T8P6 1007 aaKnown RBP6.06□□□□□ -1.44
SPG11-225ENST00000561391 SENP2Q9HC62 589 aa6.06□□□□□ -1.44
SPG11-225ENST00000561391 ATP13A2Q9NQ11 1180 aa6.06□□□□□ -1.44
SPG11-225ENST00000561391 PRDM9Q9NQV7 894 aa6.06□□□□□ -1.44
SPG11-225ENST00000561391 CEP170Q5SW79 1584 aa6.06□□□□□ -1.44
SPG11-225ENST00000561391 GRIN2BQ13224 1484 aa6.05□□□□□ -1.44
SPG11-225ENST00000561391 TERTO14746 1132 aaKnown RBP6.05□□□□□ -1.44
SPG11-225ENST00000561391 HSPA2P54652 639 aa6.05□□□□□ -1.44
SPG11-225ENST00000561391 FUT2Q10981 343 aa6.05□□□□□ -1.44
SPG11-225ENST00000561391 MORN1Q5T089 497 aa6.05□□□□□ -1.44
SPG11-225ENST00000561391 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
SPG11-225ENST00000561391 DDX11L8A8MPP1 907 aa6.04□□□□□ -1.44
SPG11-225ENST00000561391 SNRPBP14678 240 aaKnown RBP6.04□□□□□ -1.44
SPG11-225ENST00000561391 ATP6V1AP38606 617 aa6.04□□□□□ -1.44
SPG11-225ENST00000561391 METTL3Q86U44 580 aaKnown RBP6.04□□□□□ -1.44
SPG11-225ENST00000561391 TRIM47Q96LD4 638 aa6.04□□□□□ -1.44
SPG11-225ENST00000561391 COL17A1Q9UMD9 1497 aaPredicted RBP6.03□□□□□ -1.44
SPG11-225ENST00000561391 ZSCAN1Q8NBB4 408 aa6.03□□□□□ -1.44
SPG11-225ENST00000561391 SNIP1Q8TAD8 396 aaKnown RBP6.03□□□□□ -1.44
SPG11-225ENST00000561391 THAP11Q96EK4 314 aa6.03□□□□□ -1.44
SPG11-225ENST00000561391 PRG4Q92954 1404 aaPredicted RBP6.02□□□□□ -1.45
SPG11-225ENST00000561391 WNT7AO00755 349 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms