RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 RFC5P40937 340 aa10.68□□□□□ -0.7
HMG20A-211ENST00000560867 PCDHB15Q9Y5E8 787 aa10.68□□□□□ -0.7
HMG20A-211ENST00000560867 NUTM2BA6NNL0 878 aaPredicted RBP10.67□□□□□ -0.7
HMG20A-211ENST00000560867 NUTM2EB1AL46 878 aaPredicted RBP10.67□□□□□ -0.7
HMG20A-211ENST00000560867 PTPN5P54829 565 aa10.67□□□□□ -0.7
HMG20A-211ENST00000560867 NUTM2DQ5VT03 806 aaPredicted RBP10.67□□□□□ -0.7
HMG20A-211ENST00000560867 NUTM2AQ8IVF1 878 aaPredicted RBP10.67□□□□□ -0.7
HMG20A-211ENST00000560867 FMNL1O95466 1100 aaPredicted RBP10.66□□□□□ -0.7
HMG20A-211ENST00000560867 QPCTQ16769 361 aa10.66□□□□□ -0.7
HMG20A-211ENST00000560867 PUS10Q3MIT2 529 aaKnown RBP10.66□□□□□ -0.7
HMG20A-211ENST00000560867 DESI1Q6ICB0 168 aa10.66□□□□□ -0.7
HMG20A-211ENST00000560867 SCUBE3Q8IX30 993 aa10.66□□□□□ -0.7
HMG20A-211ENST00000560867 HLA-CQ95604 372 aa10.66□□□□□ -0.7
HMG20A-211ENST00000560867 IL21Q9HBE4 155 aa10.66□□□□□ -0.7
HMG20A-211ENST00000560867 C6orf229H3BNL8 230 aa10.65□□□□□ -0.7
HMG20A-211ENST00000560867 APBB1O00213 710 aa10.65□□□□□ -0.7
HMG20A-211ENST00000560867 GUCA2AQ02747 115 aa10.65□□□□□ -0.7
HMG20A-211ENST00000560867 CSPP1Q1MSJ5 1256 aa10.65□□□□□ -0.7
HMG20A-211ENST00000560867 BRICD5Q6PL45 260 aa10.65□□□□□ -0.7
HMG20A-211ENST00000560867 BLOC1S3Q6QNY0 202 aa10.65□□□□□ -0.7
HMG20A-211ENST00000560867 HELBQ8NG08 1087 aaPredicted RBP10.65□□□□□ -0.7
HMG20A-211ENST00000560867 THAP11Q96EK4 314 aa10.64□□□□□ -0.71
HMG20A-211ENST00000560867 MSS51Q4VC12 460 aa10.63□□□□□ -0.71
HMG20A-211ENST00000560867 MTRQ99707 1265 aa10.63□□□□□ -0.71
HMG20A-211ENST00000560867 USB1Q9BQ65 265 aaKnown RBP10.63□□□□□ -0.71
HMG20A-211ENST00000560867 ZPR1O75312 459 aa10.62□□□□□ -0.71
HMG20A-211ENST00000560867 CABLES1Q8TDN4 633 aa10.62□□□□□ -0.71
HMG20A-211ENST00000560867 ITGBL1O95965 494 aaPredicted RBP10.61□□□□□ -0.71
HMG20A-211ENST00000560867 TJAP1Q5JTD0 557 aa10.61□□□□□ -0.71
HMG20A-211ENST00000560867 MMRN1Q13201 1228 aa10.6□□□□□ -0.71
HMG20A-211ENST00000560867 RTL5Q5HYW3 569 aaPredicted RBP10.6□□□□□ -0.71
HMG20A-211ENST00000560867 RNF19BQ6ZMZ0 732 aa10.6□□□□□ -0.71
HMG20A-211ENST00000560867 ADH1BP00325 375 aa10.59□□□□□ -0.71
HMG20A-211ENST00000560867 COPS2P61201 443 aa10.59□□□□□ -0.71
HMG20A-211ENST00000560867 PRR7Q8TB68 274 aa10.59□□□□□ -0.71
HMG20A-211ENST00000560867 SPSB2Q99619 263 aa10.59□□□□□ -0.71
HMG20A-211ENST00000560867 MCM6Q14566 821 aa10.58□□□□□ -0.72
HMG20A-211ENST00000560867 CFAP99D6REC4 459 aa10.57□□□□□ -0.72
HMG20A-211ENST00000560867 FBXO31Q5XUX0 539 aaPredicted RBP10.57□□□□□ -0.72
HMG20A-211ENST00000560867 AP1G2O75843 785 aa10.56□□□□□ -0.72
HMG20A-211ENST00000560867 USP17L8P0C7I0 530 aa10.55□□□□□ -0.72
HMG20A-211ENST00000560867 JUNDP17535 347 aa10.55□□□□□ -0.72
HMG20A-211ENST00000560867 KCNC4Q03721 635 aa10.55□□□□□ -0.72
HMG20A-211ENST00000560867 PRM3Q9NNZ6 103 aa10.55□□□□□ -0.72
HMG20A-211ENST00000560867 MMP16P51512 607 aa10.54□□□□□ -0.72
HMG20A-211ENST00000560867 PTPRNQ16849 979 aa10.54□□□□□ -0.72
HMG20A-211ENST00000560867 SYMPKQ92797 1274 aaKnown RBP10.54□□□□□ -0.72
HMG20A-211ENST00000560867 DXOO77932 396 aaKnown RBP10.53□□□□□ -0.72
HMG20A-211ENST00000560867 IFFO2Q5TF58 517 aa10.53□□□□□ -0.72
HMG20A-211ENST00000560867 LYPD8Q6UX82 237 aa10.53□□□□□ -0.72
HMG20A-211ENST00000560867 C14orf37Q86TY3 774 aa10.53□□□□□ -0.72
HMG20A-211ENST00000560867 SLC6A16Q9GZN6 736 aa10.51□□□□□ -0.73
HMG20A-211ENST00000560867 FAM160A2Q8N612 972 aaPredicted RBP10.5□□□□□ -0.73
HMG20A-211ENST00000560867 MTMR14Q8NCE2 650 aa10.5□□□□□ -0.73
HMG20A-211ENST00000560867 PNMA1Q8ND90 353 aa10.5□□□□□ -0.73
HMG20A-211ENST00000560867 TLL1O43897 1013 aa10.49□□□□□ -0.73
HMG20A-211ENST00000560867 UBTFP17480 764 aaKnown RBP10.49□□□□□ -0.73
HMG20A-211ENST00000560867 GGCXP38435 758 aa10.49□□□□□ -0.73
HMG20A-211ENST00000560867 CTDSPL2Q05D32 466 aa10.49□□□□□ -0.73
HMG20A-211ENST00000560867 TSC1Q92574 1164 aa10.49□□□□□ -0.73
HMG20A-211ENST00000560867 ZNF516Q92618 1163 aa10.49□□□□□ -0.73
HMG20A-211ENST00000560867 A6NJR5 290 aa10.47□□□□□ -0.73
HMG20A-211ENST00000560867 RAD21O60216 631 aa10.47□□□□□ -0.73
HMG20A-211ENST00000560867 SNRKQ9NRH2 765 aa10.47□□□□□ -0.73
HMG20A-211ENST00000560867 CCNYL3P0C7X3 344 aa10.46□□□□□ -0.73
HMG20A-211ENST00000560867 NDUFB9Q9Y6M9 179 aa10.46□□□□□ -0.73
HMG20A-211ENST00000560867 ZC3H4Q9UPT8 1303 aaKnown RBP10.46□□□□□ -0.73
HMG20A-211ENST00000560867 NUDT12Q9BQG2 462 aa10.45□□□□□ -0.74
HMG20A-211ENST00000560867 TIMELESSQ9UNS1 1208 aa10.45□□□□□ -0.74
HMG20A-211ENST00000560867 F12P00748 615 aaPredicted RBP10.44□□□□□ -0.74
HMG20A-211ENST00000560867 WWC1Q8IX03 1113 aa10.44□□□□□ -0.74
HMG20A-211ENST00000560867 GJD4Q96KN9 370 aaPredicted RBP10.44□□□□□ -0.74
HMG20A-211ENST00000560867 ZMYND15Q9H091 742 aa10.44□□□□□ -0.74
HMG20A-211ENST00000560867 EVA1BQ9NVM1 165 aa10.44□□□□□ -0.74
HMG20A-211ENST00000560867 ARMC2Q8NEN0 867 aa10.43□□□□□ -0.74
HMG20A-211ENST00000560867 PER1O15534 1290 aaPredicted RBP10.42□□□□□ -0.74
HMG20A-211ENST00000560867 LRRN4Q8WUT4 740 aa10.42□□□□□ -0.74
HMG20A-211ENST00000560867 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.74
HMG20A-211ENST00000560867 PRDM9Q9NQV7 894 aa10.42□□□□□ -0.74
HMG20A-211ENST00000560867 S1PR4O95977 384 aa10.41□□□□□ -0.74
HMG20A-211ENST00000560867 KCNH2Q12809 1159 aa10.41□□□□□ -0.74
HMG20A-211ENST00000560867 TRIM34Q9BYJ4 488 aa10.41□□□□□ -0.74
HMG20A-211ENST00000560867 HMX1Q9NP08 348 aaPredicted RBP10.41□□□□□ -0.74
HMG20A-211ENST00000560867 COG6Q9Y2V7 657 aa10.41□□□□□ -0.74
HMG20A-211ENST00000560867 ANKLE1Q8NAG6 615 aa10.4□□□□□ -0.74
HMG20A-211ENST00000560867 NKX2-3Q8TAU0 364 aa10.4□□□□□ -0.74
HMG20A-211ENST00000560867 NBPF14Q5TI25 921 aa10.37□□□□□ -0.75
HMG20A-211ENST00000560867 PROSER2Q86WR7 435 aaPredicted RBP10.37□□□□□ -0.75
HMG20A-211ENST00000560867 FKBPLQ9UIM3 349 aa10.37□□□□□ -0.75
HMG20A-211ENST00000560867 CTHP32929 405 aa10.36□□□□□ -0.75
HMG20A-211ENST00000560867 NR6A1Q15406 480 aa10.36□□□□□ -0.75
HMG20A-211ENST00000560867 WASHC4Q2M389 1173 aa10.36□□□□□ -0.75
HMG20A-211ENST00000560867 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.36□□□□□ -0.75
HMG20A-211ENST00000560867 FCF1Q9Y324 198 aaKnown RBP10.36□□□□□ -0.75
HMG20A-211ENST00000560867 GPSM3Q9Y4H4 160 aa10.36□□□□□ -0.75
HMG20A-211ENST00000560867 TBC1D2BQ9UPU7 963 aa10.35□□□□□ -0.75
HMG20A-211ENST00000560867 RNF223E7ERA6 249 aa10.34□□□□□ -0.75
HMG20A-211ENST00000560867 ZNF592Q92610 1267 aa10.34□□□□□ -0.75
HMG20A-211ENST00000560867 GDPD2Q9HCC8 539 aa10.34□□□□□ -0.75
HMG20A-211ENST00000560867 MAP10Q9P2G4 905 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms