RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 VAC14Q08AM6 782 aa8.91□□□□□ -0.98
TSPAN3-209ENST00000560715 STK32AQ8WU08 396 aa8.91□□□□□ -0.98
TSPAN3-209ENST00000560715 CLEC11AQ9Y240 323 aa8.91□□□□□ -0.98
TSPAN3-209ENST00000560715 URB2Q14146 1524 aaKnown RBP8.9□□□□□ -0.98
TSPAN3-209ENST00000560715 CLK2P49760 499 aaKnown RBP8.9□□□□□ -0.98
TSPAN3-209ENST00000560715 UCN2Q96RP3 112 aa8.9□□□□□ -0.98
TSPAN3-209ENST00000560715 CDCA7Q9BWT1 371 aaPredicted RBP8.9□□□□□ -0.98
TSPAN3-209ENST00000560715 SUGT1Q9Y2Z0 365 aa8.9□□□□□ -0.98
TSPAN3-209ENST00000560715 PHLDB3Q6NSJ2 640 aa8.9□□□□□ -0.99
TSPAN3-209ENST00000560715 TBC1D2Q9BYX2 928 aa8.9□□□□□ -0.99
TSPAN3-209ENST00000560715 TFIP11Q9UBB9 837 aaKnown RBP8.9□□□□□ -0.99
TSPAN3-209ENST00000560715 CUL7Q14999 1698 aa8.9□□□□□ -0.99
TSPAN3-209ENST00000560715 TSR1Q2NL82 804 aaKnown RBP8.89□□□□□ -0.99
TSPAN3-209ENST00000560715 IPO9Q96P70 1041 aaKnown RBP8.89□□□□□ -0.99
TSPAN3-209ENST00000560715 RAD54L2Q9Y4B4 1467 aa8.89□□□□□ -0.99
TSPAN3-209ENST00000560715 EXOC8Q8IYI6 725 aa8.89□□□□□ -0.99
TSPAN3-209ENST00000560715 TRIM52Q96A61 297 aa8.88□□□□□ -0.99
TSPAN3-209ENST00000560715 PPP4R2Q9NY27 417 aa8.88□□□□□ -0.99
TSPAN3-209ENST00000560715 CCER2I3L3R5 266 aa8.87□□□□□ -0.99
TSPAN3-209ENST00000560715 OSBPP22059 807 aa8.87□□□□□ -0.99
TSPAN3-209ENST00000560715 FAM50AQ14320 339 aaKnown RBP8.87□□□□□ -0.99
TSPAN3-209ENST00000560715 ARHGAP35Q9NRY4 1499 aa8.87□□□□□ -0.99
TSPAN3-209ENST00000560715 ANKRD33BA6NCL7 494 aa8.87□□□□□ -0.99
TSPAN3-209ENST00000560715 MAP4K4O95819 1239 aaPredicted RBP8.87□□□□□ -0.99
TSPAN3-209ENST00000560715 FOXD4L6Q3SYB3 417 aaPredicted RBP8.87□□□□□ -0.99
TSPAN3-209ENST00000560715 FOXD4L3Q6VB84 417 aaPredicted RBP8.87□□□□□ -0.99
TSPAN3-209ENST00000560715 DHX57Q6P158 1386 aaKnown RBP8.86□□□□□ -0.99
TSPAN3-209ENST00000560715 SBNO2Q9Y2G9 1366 aa8.86□□□□□ -0.99
TSPAN3-209ENST00000560715 DSG2Q14126 1118 aa8.86□□□□□ -0.99
TSPAN3-209ENST00000560715 QPCTQ16769 361 aa8.86□□□□□ -0.99
TSPAN3-209ENST00000560715 GPCPD1Q9NPB8 672 aa8.86□□□□□ -0.99
TSPAN3-209ENST00000560715 ABCA5Q8WWZ7 1642 aa8.85□□□□□ -0.99
TSPAN3-209ENST00000560715 TPD52L2O43399 206 aaKnown RBP8.85□□□□□ -0.99
TSPAN3-209ENST00000560715 CANXP27824 592 aaKnown RBP8.85□□□□□ -0.99
TSPAN3-209ENST00000560715 ANP32AP39687 249 aaKnown RBP8.85□□□□□ -0.99
TSPAN3-209ENST00000560715 RBM46Q8TBY0 533 aaKnown RBP8.85□□□□□ -0.99
TSPAN3-209ENST00000560715 DHX38Q92620 1227 aaKnown RBP8.85□□□□□ -0.99
TSPAN3-209ENST00000560715 BIN2Q9UBW5 565 aaPredicted RBP8.85□□□□□ -0.99
TSPAN3-209ENST00000560715 IQSEC3Q9UPP2 1182 aaPredicted RBP8.85□□□□□ -0.99
TSPAN3-209ENST00000560715 TMEM164Q5U3C3 297 aa8.84□□□□□ -0.99
TSPAN3-209ENST00000560715 GNEQ9Y223 722 aaKnown RBP8.84□□□□□ -0.99
TSPAN3-209ENST00000560715 CTTNBP2Q8WZ74 1663 aa8.84□□□□□ -0.99
TSPAN3-209ENST00000560715 FCHSD2O94868 740 aa8.83□□□□□ -1
TSPAN3-209ENST00000560715 LNPKQ9C0E8 428 aa8.83□□□□□ -1
TSPAN3-209ENST00000560715 MYH16Q9H6N6 1097 aa8.83□□□□□ -1
TSPAN3-209ENST00000560715 AP1G2O75843 785 aa8.83□□□□□ -1
TSPAN3-209ENST00000560715 MARSP56192 900 aaKnown RBP8.83□□□□□ -1
TSPAN3-209ENST00000560715 ERCC5P28715 1186 aaPredicted RBP8.82□□□□□ -1
TSPAN3-209ENST00000560715 PTGDRQ13258 359 aa8.82□□□□□ -1
TSPAN3-209ENST00000560715 TARBP1Q13395 1621 aaKnown RBP8.82□□□□□ -1
TSPAN3-209ENST00000560715 PARNO95453 639 aaKnown RBP8.82□□□□□ -1
TSPAN3-209ENST00000560715 NPAS4Q8IUM7 802 aa8.82□□□□□ -1
TSPAN3-209ENST00000560715 UPF1Q92900 1129 aaKnown RBP eCLIP8.82□□□□□ -11e-6■■■□□ 17.8
TSPAN3-209ENST00000560715 EVI5LQ96CN4 794 aa8.82□□□□□ -1
TSPAN3-209ENST00000560715 C8orf37Q96NL8 207 aa8.82□□□□□ -1
TSPAN3-209ENST00000560715 GABBR1Q9UBS5 961 aa8.82□□□□□ -1
TSPAN3-209ENST00000560715 CDHR5Q9HBB8 845 aa8.81□□□□□ -1
TSPAN3-209ENST00000560715 SLAIN2Q9P270 581 aa8.81□□□□□ -1
TSPAN3-209ENST00000560715 ZMIZ1Q9ULJ6 1067 aa8.81□□□□□ -1
TSPAN3-209ENST00000560715 MAP3K1Q13233 1512 aa8.81□□□□□ -1
TSPAN3-209ENST00000560715 GAPVD1Q14C86 1478 aa8.81□□□□□ -1
TSPAN3-209ENST00000560715 NEFMP07197 916 aa8.81□□□□□ -1
TSPAN3-209ENST00000560715 CLCN1P35523 988 aa8.81□□□□□ -1
TSPAN3-209ENST00000560715 FAM43AQ8N2R8 423 aa8.81□□□□□ -1
TSPAN3-209ENST00000560715 TMUB1Q9BVT8 246 aa8.8□□□□□ -1
TSPAN3-209ENST00000560715 HMX1Q9NP08 348 aaPredicted RBP8.8□□□□□ -1
TSPAN3-209ENST00000560715 EFCAB5A4FU69 1503 aa8.8□□□□□ -1
TSPAN3-209ENST00000560715 MRC2Q9UBG0 1479 aa8.8□□□□□ -1
TSPAN3-209ENST00000560715 IFNL1Q8IU54 200 aa8.8□□□□□ -1
TSPAN3-209ENST00000560715 BACH2Q9BYV9 841 aa8.8□□□□□ -1
TSPAN3-209ENST00000560715 TANGO6Q9C0B7 1094 aa8.8□□□□□ -1
TSPAN3-209ENST00000560715 PLEKHD1A6NEE1 506 aa8.79□□□□□ -1
TSPAN3-209ENST00000560715 GPR37L1O60883 481 aa8.79□□□□□ -1
TSPAN3-209ENST00000560715 FGD1P98174 961 aa8.79□□□□□ -1
TSPAN3-209ENST00000560715 WWC1Q8IX03 1113 aa8.79□□□□□ -1
TSPAN3-209ENST00000560715 TEX2Q8IWB9 1127 aa8.79□□□□□ -1
TSPAN3-209ENST00000560715 ANO2Q9NQ90 1003 aa8.79□□□□□ -1
TSPAN3-209ENST00000560715 DDX10Q13206 875 aaKnown RBP8.79□□□□□ -1
TSPAN3-209ENST00000560715 APBB1IPQ7Z5R6 666 aaPredicted RBP8.79□□□□□ -1
TSPAN3-209ENST00000560715 FHAD1B1AJZ9 1412 aa8.78□□□□□ -1
TSPAN3-209ENST00000560715 GTF2F1P35269 517 aaKnown RBP eCLIP8.78□□□□□ -1
TSPAN3-209ENST00000560715 GORABQ5T7V8 394 aa8.78□□□□□ -1
TSPAN3-209ENST00000560715 NLGN1Q8N2Q7 840 aa8.78□□□□□ -1
TSPAN3-209ENST00000560715 PIF1Q9H611 641 aa8.78□□□□□ -1
TSPAN3-209ENST00000560715 PBRM1Q86U86 1689 aa8.78□□□□□ -1
TSPAN3-209ENST00000560715 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
TSPAN3-209ENST00000560715 TDRD9Q8NDG6 1382 aaKnown RBP8.78□□□□□ -1
TSPAN3-209ENST00000560715 C7P10643 843 aa8.77□□□□□ -1.01
TSPAN3-209ENST00000560715 TBC1D9Q6ZT07 1266 aa8.77□□□□□ -1.01
TSPAN3-209ENST00000560715 FAM9BQ8IZU0 186 aa8.77□□□□□ -1.01
TSPAN3-209ENST00000560715 PRR7Q8TB68 274 aa8.77□□□□□ -1.01
TSPAN3-209ENST00000560715 FAM161BQ96MY7 647 aa8.77□□□□□ -1.01
TSPAN3-209ENST00000560715 B4GALNT3Q6L9W6 998 aa8.77□□□□□ -1.01
TSPAN3-209ENST00000560715 BANK1Q8NDB2 785 aa8.77□□□□□ -1.01
TSPAN3-209ENST00000560715 SGSM3Q96HU1 749 aa8.77□□□□□ -1.01
TSPAN3-209ENST00000560715 TIAM1Q13009 1591 aa8.77□□□□□ -1.01
TSPAN3-209ENST00000560715 ANP32CO43423 234 aa8.76□□□□□ -1.01
TSPAN3-209ENST00000560715 PMFBP1Q8TBY8 1022 aa8.76□□□□□ -1.01
TSPAN3-209ENST00000560715 MAFBQ9Y5Q3 323 aaPredicted RBP8.76□□□□□ -1.01
TSPAN3-209ENST00000560715 PRR29P0C7W0 189 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms