RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 LRPPRCP42704 1394 aaKnown RBP14.54□□□□□ -0.08
CRTC3-209ENST00000560320 DLC1Q96QB1 1528 aa14.54□□□□□ -0.08
CRTC3-209ENST00000560320 DIP2AQ14689 1571 aa14.52□□□□□ -0.08
CRTC3-209ENST00000560320 MYOM1P52179 1685 aa14.52□□□□□ -0.09
CRTC3-209ENST00000560320 CENPBP07199 599 aaPredicted RBP14.51□□□□□ -0.09
CRTC3-209ENST00000560320 PUS7Q96PZ0 661 aaKnown RBP14.51□□□□□ -0.09
CRTC3-209ENST00000560320 PRKRIP1Q9H875 184 aaPredicted RBP14.51□□□□□ -0.09
CRTC3-209ENST00000560320 KTN1Q86UP2 1357 aaKnown RBP14.5□□□□□ -0.09
CRTC3-209ENST00000560320 ABCC11Q96J66 1382 aa14.5□□□□□ -0.09
CRTC3-209ENST00000560320 LTKP29376 864 aa14.49□□□□□ -0.09
CRTC3-209ENST00000560320 YTHDC1Q96MU7 727 aaKnown RBP14.49□□□□□ -0.09
CRTC3-209ENST00000560320 PRAM1Q96QH2 718 aa14.49□□□□□ -0.09
CRTC3-209ENST00000560320 PANK3Q9H999 370 aa14.49□□□□□ -0.09
CRTC3-209ENST00000560320 SAFB2Q14151 953 aaKnown RBP eCLIP14.48□□□□□ -0.09
CRTC3-209ENST00000560320 ANKLE2Q86XL3 938 aa14.48□□□□□ -0.09
CRTC3-209ENST00000560320 RALBP1Q15311 655 aa14.47□□□□□ -0.09
CRTC3-209ENST00000560320 SIRT1Q96EB6 747 aa14.47□□□□□ -0.09
CRTC3-209ENST00000560320 KNSTRNQ9Y448 316 aa14.47□□□□□ -0.09
CRTC3-209ENST00000560320 ADAMTS13Q76LX8 1427 aa14.47□□□□□ -0.09
CRTC3-209ENST00000560320 METP08581 1390 aa14.47□□□□□ -0.09
CRTC3-209ENST00000560320 MINK1Q8N4C8 1332 aaPredicted RBP14.46□□□□□ -0.09
CRTC3-209ENST00000560320 TBX22Q9Y458 520 aa14.46□□□□□ -0.09
CRTC3-209ENST00000560320 FAM135BQ49AJ0 1406 aa14.46□□□□□ -0.09
CRTC3-209ENST00000560320 TULP4Q9NRJ4 1543 aa14.46□□□□□ -0.1
CRTC3-209ENST00000560320 TECPR2O15040 1411 aa14.45□□□□□ -0.1
CRTC3-209ENST00000560320 SRPK2P78362 688 aaKnown RBP14.45□□□□□ -0.1
CRTC3-209ENST00000560320 CNGB1Q14028 1251 aaPredicted RBP14.45□□□□□ -0.1
CRTC3-209ENST00000560320 TMC1Q8TDI8 760 aa14.45□□□□□ -0.1
CRTC3-209ENST00000560320 UPF1Q92900 1129 aaKnown RBP eCLIP14.45□□□□□ -0.1
CRTC3-209ENST00000560320 NINLQ9Y2I6 1382 aa14.45□□□□□ -0.1
CRTC3-209ENST00000560320 ATAD2Q6PL18 1390 aa14.44□□□□□ -0.1
CRTC3-209ENST00000560320 MED14O60244 1454 aa14.44□□□□□ -0.1
CRTC3-209ENST00000560320 SLC26A8Q96RN1 970 aa14.43□□□□□ -0.1
CRTC3-209ENST00000560320 PIK3R4Q99570 1358 aa14.42□□□□□ -0.1
CRTC3-209ENST00000560320 PER1O15534 1290 aaPredicted RBP14.41□□□□□ -0.1
CRTC3-209ENST00000560320 WAPLQ7Z5K2 1190 aa14.41□□□□□ -0.1
CRTC3-209ENST00000560320 MRS2Q9HD23 443 aa14.41□□□□□ -0.1
CRTC3-209ENST00000560320 MYBBP1AQ9BQG0 1328 aaKnown RBP14.41□□□□□ -0.1
CRTC3-209ENST00000560320 CDK19Q9BWU1 502 aa14.4□□□□□ -0.1
CRTC3-209ENST00000560320 CABP2Q9NPB3 220 aa14.4□□□□□ -0.1
CRTC3-209ENST00000560320 CHD2O14647 1828 aaKnown RBP14.39□□□□□ -0.11
CRTC3-209ENST00000560320 CC2D1BQ5T0F9 858 aaKnown RBP14.39□□□□□ -0.11
CRTC3-209ENST00000560320 PARD3Q8TEW0 1356 aa14.38□□□□□ -0.11
CRTC3-209ENST00000560320 NPC1L1Q9UHC9 1359 aa14.38□□□□□ -0.11
CRTC3-209ENST00000560320 PLEKHH1Q9ULM0 1364 aa14.38□□□□□ -0.11
CRTC3-209ENST00000560320 TERF2IPQ9NYB0 399 aa14.38□□□□□ -0.11
CRTC3-209ENST00000560320 AMOTL2Q9Y2J4 779 aa14.38□□□□□ -0.11
CRTC3-209ENST00000560320 XRN1Q8IZH2 1706 aaKnown RBP14.38□□□□□ -0.11
CRTC3-209ENST00000560320 USP32Q8NFA0 1604 aa14.37□□□□□ -0.11
CRTC3-209ENST00000560320 STRCP1A6NGW2 1772 aa14.37□□□□□ -0.11
CRTC3-209ENST00000560320 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
CRTC3-209ENST00000560320 NPHP4O75161 1426 aaPredicted RBP14.37□□□□□ -0.11
CRTC3-209ENST00000560320 PTCH1Q13635 1447 aa14.37□□□□□ -0.11
CRTC3-209ENST00000560320 BRD4O60885 1362 aaPredicted RBP14.36□□□□□ -0.11
CRTC3-209ENST00000560320 ANKRD36BQ8N2N9 1353 aa14.36□□□□□ -0.11
CRTC3-209ENST00000560320 ADGRB2O60241 1585 aa14.36□□□□□ -0.11
CRTC3-209ENST00000560320 WASLO00401 505 aaPredicted RBP14.36□□□□□ -0.11
CRTC3-209ENST00000560320 HDGFL2Q7Z4V5 671 aaPredicted RBP14.36□□□□□ -0.11
CRTC3-209ENST00000560320 LRRC7Q96NW7 1537 aa14.36□□□□□ -0.11
CRTC3-209ENST00000560320 ROBO2Q9HCK4 1378 aa14.35□□□□□ -0.11
CRTC3-209ENST00000560320 PTPRUQ92729 1446 aa14.35□□□□□ -0.11
CRTC3-209ENST00000560320 NSD3Q9BZ95 1437 aa14.35□□□□□ -0.11
CRTC3-209ENST00000560320 NLRP13Q86W25 1043 aa14.35□□□□□ -0.11
CRTC3-209ENST00000560320 AMER1Q5JTC6 1135 aaPredicted RBP14.34□□□□□ -0.11
CRTC3-209ENST00000560320 ITSN1Q15811 1721 aa14.34□□□□□ -0.11
CRTC3-209ENST00000560320 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.34□□□□□ -0.11
CRTC3-209ENST00000560320 CGNL1Q0VF96 1302 aa14.34□□□□□ -0.11
CRTC3-209ENST00000560320 FAM9BQ8IZU0 186 aa14.32□□□□□ -0.12
CRTC3-209ENST00000560320 CARD14Q9BXL6 1004 aa14.32□□□□□ -0.12
CRTC3-209ENST00000560320 NSD2O96028 1365 aa14.32□□□□□ -0.12
CRTC3-209ENST00000560320 KIF20BQ96Q89 1820 aa14.31□□□□□ -0.12
CRTC3-209ENST00000560320 ATP7BP35670 1465 aa14.31□□□□□ -0.12
CRTC3-209ENST00000560320 ANKRD26Q9UPS8 1709 aa14.31□□□□□ -0.12
CRTC3-209ENST00000560320 CCDC184Q52MB2 194 aa14.3□□□□□ -0.12
CRTC3-209ENST00000560320 NUDT16Q96DE0 195 aaKnown RBP14.3□□□□□ -0.12
CRTC3-209ENST00000560320 AKAP12Q02952 1782 aa14.29□□□□□ -0.12
CRTC3-209ENST00000560320 KCNA6P17658 529 aa14.29□□□□□ -0.12
CRTC3-209ENST00000560320 MORC1Q86VD1 984 aa14.29□□□□□ -0.12
CRTC3-209ENST00000560320 CABP1Q9NZU7 370 aa14.29□□□□□ -0.12
CRTC3-209ENST00000560320 CCDC61Q9Y6R9 512 aa14.29□□□□□ -0.12
CRTC3-209ENST00000560320 A0A1W2PP64 1363 aa14.29□□□□□ -0.12
CRTC3-209ENST00000560320 PPIP5K1Q6PFW1 1433 aa14.29□□□□□ -0.12
CRTC3-209ENST00000560320 TOPAZ1Q8N9V7 1692 aa14.27□□□□□ -0.12
CRTC3-209ENST00000560320 CDC42BPGQ6DT37 1551 aa14.27□□□□□ -0.12
CRTC3-209ENST00000560320 PPP2R1AP30153 589 aa14.27□□□□□ -0.13
CRTC3-209ENST00000560320 HNRNPUQ00839 825 aaKnown RBP eCLIP14.27□□□□□ -0.13
CRTC3-209ENST00000560320 XIRP1Q702N8 1843 aaKnown RBP14.27□□□□□ -0.13
CRTC3-209ENST00000560320 MON2Q7Z3U7 1717 aa14.27□□□□□ -0.13
CRTC3-209ENST00000560320 NWD1Q149M9 1564 aa14.26□□□□□ -0.13
CRTC3-209ENST00000560320 FMN2Q9NZ56 1722 aa14.26□□□□□ -0.13
CRTC3-209ENST00000560320 RGPD8O14715 1765 aaPredicted RBP14.25□□□□□ -0.13
CRTC3-209ENST00000560320 ZNF692Q9BU19 519 aaPredicted RBP14.25□□□□□ -0.13
CRTC3-209ENST00000560320 NALCNQ8IZF0 1738 aa14.24□□□□□ -0.13
CRTC3-209ENST00000560320 PNISRQ8TF01 805 aaKnown RBP14.24□□□□□ -0.13
CRTC3-209ENST00000560320 CD163L1Q9NR16 1453 aa14.24□□□□□ -0.13
CRTC3-209ENST00000560320 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
CRTC3-209ENST00000560320 WDR43Q15061 677 aaKnown RBP eCLIP14.23□□□□□ -0.13
CRTC3-209ENST00000560320 C14orf37Q86TY3 774 aa14.23□□□□□ -0.13
CRTC3-209ENST00000560320 NKTRP30414 1462 aaKnown RBP14.23□□□□□ -0.13
CRTC3-209ENST00000560320 ANKARQ7Z5J8 1434 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms