RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 SLC4A10Q6U841 1118 aa13.53□□□□□ -0.24
CARMIL3-202ENST00000559694 RGS3P49796 1198 aa13.53□□□□□ -0.24
CARMIL3-202ENST00000559694 PDE3BQ13370 1112 aa13.53□□□□□ -0.24
CARMIL3-202ENST00000559694 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
CARMIL3-202ENST00000559694 IPO9Q96P70 1041 aaKnown RBP13.52□□□□□ -0.24
CARMIL3-202ENST00000559694 ADAMTS8Q9UP79 889 aa13.52□□□□□ -0.24
CARMIL3-202ENST00000559694 RIMS2Q9UQ26 1411 aa13.52□□□□□ -0.25
CARMIL3-202ENST00000559694 BCL2L13Q9BXK5 485 aa13.52□□□□□ -0.25
CARMIL3-202ENST00000559694 RUNDC1Q96C34 613 aa13.51□□□□□ -0.25
CARMIL3-202ENST00000559694 CADPS2Q86UW7 1296 aa13.51□□□□□ -0.25
CARMIL3-202ENST00000559694 TTC5Q8N0Z6 440 aa13.51□□□□□ -0.25
CARMIL3-202ENST00000559694 ADGBQ8N7X0 1667 aa13.51□□□□□ -0.25
CARMIL3-202ENST00000559694 ITPRIPQ8IWB1 547 aa13.5□□□□□ -0.25
CARMIL3-202ENST00000559694 EIF2S2P20042 333 aaKnown RBP13.5□□□□□ -0.25
CARMIL3-202ENST00000559694 APBB1O00213 710 aa13.5□□□□□ -0.25
CARMIL3-202ENST00000559694 TOM1L2Q6ZVM7 507 aa13.5□□□□□ -0.25
CARMIL3-202ENST00000559694 NGEFQ8N5V2 710 aa13.5□□□□□ -0.25
CARMIL3-202ENST00000559694 ADCY10Q96PN6 1610 aa13.49□□□□□ -0.25
CARMIL3-202ENST00000559694 MBD5Q9P267 1494 aa13.49□□□□□ -0.25
CARMIL3-202ENST00000559694 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
CARMIL3-202ENST00000559694 PRKAR2BP31323 418 aa13.49□□□□□ -0.25
CARMIL3-202ENST00000559694 SULT6B1Q6IMI4 303 aa13.49□□□□□ -0.25
CARMIL3-202ENST00000559694 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
CARMIL3-202ENST00000559694 BECN1Q14457 450 aa13.48□□□□□ -0.25
CARMIL3-202ENST00000559694 NME9Q86XW9 330 aa13.48□□□□□ -0.25
CARMIL3-202ENST00000559694 KCNA6P17658 529 aa13.47□□□□□ -0.25
CARMIL3-202ENST00000559694 TCP11L2Q8N4U5 519 aa13.47□□□□□ -0.25
CARMIL3-202ENST00000559694 E9PSI1 815 aa13.47□□□□□ -0.25
CARMIL3-202ENST00000559694 GTF2E1P29083 439 aaPredicted RBP13.47□□□□□ -0.25
CARMIL3-202ENST00000559694 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
CARMIL3-202ENST00000559694 ZCCHC11Q5TAX3 1644 aaKnown RBP13.46□□□□□ -0.25
CARMIL3-202ENST00000559694 TSPOAP1O95153 1857 aa13.46□□□□□ -0.25
CARMIL3-202ENST00000559694 ADAMTS2O95450 1211 aa13.46□□□□□ -0.26
CARMIL3-202ENST00000559694 NSD3Q9BZ95 1437 aa13.46□□□□□ -0.26
CARMIL3-202ENST00000559694 SCAF11Q99590 1463 aaKnown RBP13.45□□□□□ -0.26
CARMIL3-202ENST00000559694 UBAP1LF5GYI3 381 aa13.45□□□□□ -0.26
CARMIL3-202ENST00000559694 TBX22Q9Y458 520 aa13.45□□□□□ -0.26
CARMIL3-202ENST00000559694 CHMP3Q9Y3E7 222 aa13.45□□□□□ -0.26
CARMIL3-202ENST00000559694 ZFYVE16Q7Z3T8 1539 aa13.45□□□□□ -0.26
CARMIL3-202ENST00000559694 MSH5O43196 834 aa13.45□□□□□ -0.26
CARMIL3-202ENST00000559694 NAP1L5Q96NT1 182 aaPredicted RBP13.45□□□□□ -0.26
CARMIL3-202ENST00000559694 DDX54Q8TDD1 881 aaKnown RBP13.45□□□□□ -0.26
CARMIL3-202ENST00000559694 TSPYL4Q9UJ04 414 aa13.44□□□□□ -0.26
CARMIL3-202ENST00000559694 ARHGEF5Q12774 1597 aa13.44□□□□□ -0.26
CARMIL3-202ENST00000559694 PLEKHO1Q53GL0 409 aaPredicted RBP13.44□□□□□ -0.26
CARMIL3-202ENST00000559694 TATP17735 454 aaPredicted RBP13.44□□□□□ -0.26
CARMIL3-202ENST00000559694 KCNH5Q8NCM2 988 aa13.44□□□□□ -0.26
CARMIL3-202ENST00000559694 BRD4O60885 1362 aaPredicted RBP13.44□□□□□ -0.26
CARMIL3-202ENST00000559694 ACEP12821 1306 aa13.43□□□□□ -0.26
CARMIL3-202ENST00000559694 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
CARMIL3-202ENST00000559694 PZPP20742 1482 aa13.43□□□□□ -0.26
CARMIL3-202ENST00000559694 TTC37Q6PGP7 1564 aa13.43□□□□□ -0.26
CARMIL3-202ENST00000559694 UHRF1BP1Q6BDS2 1440 aa13.43□□□□□ -0.26
CARMIL3-202ENST00000559694 TRIM44Q96DX7 344 aaPredicted RBP13.43□□□□□ -0.26
CARMIL3-202ENST00000559694 MSH6P52701 1360 aa13.42□□□□□ -0.26
CARMIL3-202ENST00000559694 TOM1O60784 492 aa13.42□□□□□ -0.26
CARMIL3-202ENST00000559694 C19orf44Q9H6X5 657 aa13.42□□□□□ -0.26
CARMIL3-202ENST00000559694 GAS2L2Q8NHY3 880 aa13.42□□□□□ -0.26
CARMIL3-202ENST00000559694 CFAP65Q6ZU64 1925 aaKnown RBP13.42□□□□□ -0.26
CARMIL3-202ENST00000559694 GNAI1P63096 354 aa13.41□□□□□ -0.26
CARMIL3-202ENST00000559694 CLASP1Q7Z460 1538 aa13.41□□□□□ -0.26
CARMIL3-202ENST00000559694 PLIN1O60240 522 aa13.41□□□□□ -0.26
CARMIL3-202ENST00000559694 MYO5CQ9NQX4 1742 aa13.41□□□□□ -0.26
CARMIL3-202ENST00000559694 ZBED9Q6R2W3 1325 aa13.41□□□□□ -0.26
CARMIL3-202ENST00000559694 LTKP29376 864 aa13.4□□□□□ -0.26
CARMIL3-202ENST00000559694 ZNF530Q6P9A1 599 aaPredicted RBP13.4□□□□□ -0.26
CARMIL3-202ENST00000559694 CCDC184Q52MB2 194 aa13.4□□□□□ -0.26
CARMIL3-202ENST00000559694 TAF7LQ5H9L4 462 aa13.4□□□□□ -0.26
CARMIL3-202ENST00000559694 EMILIN1Q9Y6C2 1016 aa13.4□□□□□ -0.27
CARMIL3-202ENST00000559694 KDM6BO15054 1643 aa13.39□□□□□ -0.27
CARMIL3-202ENST00000559694 NPATQ14207 1427 aa13.39□□□□□ -0.27
CARMIL3-202ENST00000559694 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
CARMIL3-202ENST00000559694 PRAG1Q86YV5 1406 aa13.39□□□□□ -0.27
CARMIL3-202ENST00000559694 MLH3Q9UHC1 1453 aa13.39□□□□□ -0.27
CARMIL3-202ENST00000559694 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
CARMIL3-202ENST00000559694 HDAC5Q9UQL6 1122 aa13.39□□□□□ -0.27
CARMIL3-202ENST00000559694 DISP3Q9P2K9 1392 aa13.39□□□□□ -0.27
CARMIL3-202ENST00000559694 FBLN1P23142 703 aa13.38□□□□□ -0.27
CARMIL3-202ENST00000559694 CASC1Q6TDU7 716 aa13.38□□□□□ -0.27
CARMIL3-202ENST00000559694 SAMD9LQ8IVG5 1584 aa13.38□□□□□ -0.27
CARMIL3-202ENST00000559694 PNISRQ8TF01 805 aaKnown RBP13.37□□□□□ -0.27
CARMIL3-202ENST00000559694 PREX2Q70Z35 1606 aa13.37□□□□□ -0.27
CARMIL3-202ENST00000559694 RWDD1Q9H446 243 aaPredicted RBP13.37□□□□□ -0.27
CARMIL3-202ENST00000559694 ARHGEF12Q9NZN5 1544 aa13.37□□□□□ -0.27
CARMIL3-202ENST00000559694 CDC42BPAQ5VT25 1732 aa13.37□□□□□ -0.27
CARMIL3-202ENST00000559694 FKBP5Q13451 457 aaPredicted RBP13.36□□□□□ -0.27
CARMIL3-202ENST00000559694 ZKSCAN2Q63HK3 967 aa13.36□□□□□ -0.27
CARMIL3-202ENST00000559694 MAGI2Q86UL8 1455 aa13.36□□□□□ -0.27
CARMIL3-202ENST00000559694 NEXNQ0ZGT2 675 aa13.36□□□□□ -0.27
CARMIL3-202ENST00000559694 CHRNA2Q15822 529 aa13.36□□□□□ -0.27
CARMIL3-202ENST00000559694 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
CARMIL3-202ENST00000559694 CDCA7LQ96GN5 454 aa13.35□□□□□ -0.27
CARMIL3-202ENST00000559694 LRPPRCP42704 1394 aaKnown RBP13.35□□□□□ -0.27
CARMIL3-202ENST00000559694 AIMP1Q12904 312 aaKnown RBP13.35□□□□□ -0.27
CARMIL3-202ENST00000559694 USHBP1Q8N6Y0 703 aa13.35□□□□□ -0.27
CARMIL3-202ENST00000559694 TMEM2Q9UHN6 1383 aa13.35□□□□□ -0.27
CARMIL3-202ENST00000559694 NPHP3Q7Z494 1330 aa13.35□□□□□ -0.27
CARMIL3-202ENST00000559694 ABCC1P33527 1531 aa13.35□□□□□ -0.27
CARMIL3-202ENST00000559694 TMX4Q9H1E5 349 aaPredicted RBP13.35□□□□□ -0.27
CARMIL3-202ENST00000559694 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms