RNA–Protein interactions for RNA: ENST00000559077.1

RNF111-204, Transcript of ring finger protein 111, humanhuman

TSL 5

Gene RNF111, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-204ENST00000559077 PLCB2Q00722 1185 aa13.3□□□□□ -0.28
RNF111-204ENST00000559077 ZNF697Q5TEC3 545 aa13.3□□□□□ -0.28
RNF111-204ENST00000559077 PPEF1O14829 653 aaPredicted RBP13.29□□□□□ -0.28
RNF111-204ENST00000559077 ZNF598Q86UK7 904 aaKnown RBP13.29□□□□□ -0.28
RNF111-204ENST00000559077 EFCAB5A4FU69 1503 aa13.29□□□□□ -0.28
RNF111-204ENST00000559077 IQGAP2Q13576 1575 aa13.28□□□□□ -0.28
RNF111-204ENST00000559077 POTECB2RU33 542 aa13.28□□□□□ -0.28
RNF111-204ENST00000559077 S1PR4O95977 384 aa13.28□□□□□ -0.28
RNF111-204ENST00000559077 ARHGEF1Q92888 912 aaKnown RBP13.28□□□□□ -0.28
RNF111-204ENST00000559077 CHD1O14646 1710 aa13.27□□□□□ -0.28
RNF111-204ENST00000559077 LOC105371045A0A1W2PR82 267 aa13.27□□□□□ -0.29
RNF111-204ENST00000559077 MLLT3P42568 568 aaPredicted RBP13.27□□□□□ -0.29
RNF111-204ENST00000559077 TTC13Q8NBP0 860 aa13.27□□□□□ -0.29
RNF111-204ENST00000559077 CEP162Q5TB80 1403 aa13.26□□□□□ -0.29
RNF111-204ENST00000559077 NPDC1Q9NQX5 325 aaPredicted RBP13.26□□□□□ -0.29
RNF111-204ENST00000559077 KMT5BQ4FZB7 885 aa13.25□□□□□ -0.29
RNF111-204ENST00000559077 ANKLE1Q8NAG6 615 aa13.25□□□□□ -0.29
RNF111-204ENST00000559077 EMID1Q96A84 441 aaPredicted RBP13.25□□□□□ -0.29
RNF111-204ENST00000559077 EYA1Q99502 592 aa13.25□□□□□ -0.29
RNF111-204ENST00000559077 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
RNF111-204ENST00000559077 CLIP1P30622 1438 aa13.24□□□□□ -0.29
RNF111-204ENST00000559077 UGGT2Q9NYU1 1516 aa13.23□□□□□ -0.29
RNF111-204ENST00000559077 PRR20EP86478 221 aa13.23□□□□□ -0.29
RNF111-204ENST00000559077 PRR20CP86479 221 aa13.23□□□□□ -0.29
RNF111-204ENST00000559077 PRR20DP86480 221 aa13.23□□□□□ -0.29
RNF111-204ENST00000559077 PRR20BP86481 221 aa13.23□□□□□ -0.29
RNF111-204ENST00000559077 PRR20AP86496 221 aa13.23□□□□□ -0.29
RNF111-204ENST00000559077 LIAT1Q6ZQX7 453 aa13.22□□□□□ -0.29
RNF111-204ENST00000559077 ST8SIA5O15466 376 aa13.21□□□□□ -0.29
RNF111-204ENST00000559077 DNAJB2P25686 324 aa13.21□□□□□ -0.29
RNF111-204ENST00000559077 CARMIL2Q6F5E8 1435 aa13.2□□□□□ -0.3
RNF111-204ENST00000559077 CLASP1Q7Z460 1538 aa13.19□□□□□ -0.3
RNF111-204ENST00000559077 CFHP08603 1231 aa13.19□□□□□ -0.3
RNF111-204ENST00000559077 SAMD9Q5K651 1589 aa13.19□□□□□ -0.3
RNF111-204ENST00000559077 RBM46Q8TBY0 533 aaKnown RBP13.18□□□□□ -0.3
RNF111-204ENST00000559077 FOXC1Q12948 553 aa13.17□□□□□ -0.3
RNF111-204ENST00000559077 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
RNF111-204ENST00000559077 ACTN4O43707 911 aaKnown RBP13.15□□□□□ -0.3
RNF111-204ENST00000559077 NR1I2O75469 434 aa13.15□□□□□ -0.3
RNF111-204ENST00000559077 ADH1BP00325 375 aa13.15□□□□□ -0.3
RNF111-204ENST00000559077 SLC6A16Q9GZN6 736 aa13.15□□□□□ -0.3
RNF111-204ENST00000559077 ARHGAP35Q9NRY4 1499 aa13.15□□□□□ -0.3
RNF111-204ENST00000559077 FMN1Q68DA7 1419 aa13.14□□□□□ -0.31
RNF111-204ENST00000559077 GDF9O60383 454 aa13.14□□□□□ -0.31
RNF111-204ENST00000559077 TREML4Q6UXN2 200 aa13.13□□□□□ -0.31
RNF111-204ENST00000559077 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
RNF111-204ENST00000559077 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
RNF111-204ENST00000559077 SEMA3EO15041 775 aa13.12□□□□□ -0.31
RNF111-204ENST00000559077 P3H3Q8IVL6 736 aa13.12□□□□□ -0.31
RNF111-204ENST00000559077 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
RNF111-204ENST00000559077 VPS8Q8N3P4 1428 aa13.12□□□□□ -0.31
RNF111-204ENST00000559077 DISP1Q96F81 1524 aa13.1□□□□□ -0.31
RNF111-204ENST00000559077 RCCD1A6NED2 376 aa13.1□□□□□ -0.31
RNF111-204ENST00000559077 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
RNF111-204ENST00000559077 PRG4Q92954 1404 aaPredicted RBP13.09□□□□□ -0.31
RNF111-204ENST00000559077 PLA2G2CQ5R387 149 aa13.08□□□□□ -0.32
RNF111-204ENST00000559077 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
RNF111-204ENST00000559077 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
RNF111-204ENST00000559077 ADGRG1Q9Y653 693 aa13.07□□□□□ -0.32
RNF111-204ENST00000559077 FYCO1Q9BQS8 1478 aa13.06□□□□□ -0.32
RNF111-204ENST00000559077 NUTM2FA1L443 756 aa13.06□□□□□ -0.32
RNF111-204ENST00000559077 PTGDRQ13258 359 aa13.05□□□□□ -0.32
RNF111-204ENST00000559077 KDM2AQ9Y2K7 1162 aa13.05□□□□□ -0.32
RNF111-204ENST00000559077 FHOD3Q2V2M9 1422 aa13.05□□□□□ -0.32
RNF111-204ENST00000559077 CASKIN1Q8WXD9 1431 aa13.04□□□□□ -0.32
RNF111-204ENST00000559077 RANGAP1P46060 587 aaPredicted RBP13.03□□□□□ -0.32
RNF111-204ENST00000559077 PUS10Q3MIT2 529 aaKnown RBP13.03□□□□□ -0.32
RNF111-204ENST00000559077 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
RNF111-204ENST00000559077 C11orf95C9JLR9 678 aaPredicted RBP13.02□□□□□ -0.33
RNF111-204ENST00000559077 SLC10A3P09131 477 aa13.02□□□□□ -0.33
RNF111-204ENST00000559077 SCUBE3Q8IX30 993 aa13.02□□□□□ -0.33
RNF111-204ENST00000559077 SPSB2Q99619 263 aa13.02□□□□□ -0.33
RNF111-204ENST00000559077 WFS1O76024 890 aa13.01□□□□□ -0.33
RNF111-204ENST00000559077 CYP4X1Q8N118 509 aa13.01□□□□□ -0.33
RNF111-204ENST00000559077 PTPRGP23470 1445 aa13.01□□□□□ -0.33
RNF111-204ENST00000559077 HECW1Q76N89 1606 aa13.01□□□□□ -0.33
RNF111-204ENST00000559077 CCDC18Q5T9S5 1454 aa13□□□□□ -0.33
RNF111-204ENST00000559077 AXIN1O15169 862 aa13□□□□□ -0.33
RNF111-204ENST00000559077 PKD2L1Q9P0L9 805 aa13□□□□□ -0.33
RNF111-204ENST00000559077 DACH1Q9UI36 760 aa13□□□□□ -0.33
RNF111-204ENST00000559077 TESPA1A2RU30 521 aaPredicted RBP12.99□□□□□ -0.33
RNF111-204ENST00000559077 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
RNF111-204ENST00000559077 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
RNF111-204ENST00000559077 GMPR2Q9P2T1 348 aaKnown RBP12.99□□□□□ -0.33
RNF111-204ENST00000559077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
RNF111-204ENST00000559077 RAPGEF6Q8TEU7 1601 aa12.97□□□□□ -0.33
RNF111-204ENST00000559077 PCF11O94913 1555 aaKnown RBP12.97□□□□□ -0.33
RNF111-204ENST00000559077 UHRF1BP1LA0JNW5 1464 aa12.97□□□□□ -0.33
RNF111-204ENST00000559077 ABCA8O94911 1581 aa12.96□□□□□ -0.33
RNF111-204ENST00000559077 CD2BP2O95400 341 aaKnown RBP12.96□□□□□ -0.33
RNF111-204ENST00000559077 UACAQ9BZF9 1416 aa12.96□□□□□ -0.34
RNF111-204ENST00000559077 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
RNF111-204ENST00000559077 LCE2AQ5TA79 106 aaPredicted RBP12.95□□□□□ -0.34
RNF111-204ENST00000559077 FCF1Q9Y324 198 aaKnown RBP12.95□□□□□ -0.34
RNF111-204ENST00000559077 ARHGEF11O15085 1522 aa12.94□□□□□ -0.34
RNF111-204ENST00000559077 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
RNF111-204ENST00000559077 TTC24A2A3L6 582 aaPredicted RBP12.93□□□□□ -0.34
RNF111-204ENST00000559077 RPIAP49247 311 aa12.93□□□□□ -0.34
RNF111-204ENST00000559077 CRIPAKQ8N1N5 446 aa12.92□□□□□ -0.34
RNF111-204ENST00000559077 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms