RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 UBAP1LF5GYI3 381 aa10.81□□□□□ -0.68
LRRC28-211ENST00000558890 C19orf44Q9H6X5 657 aa10.81□□□□□ -0.68
LRRC28-211ENST00000558890 TOM1O60784 492 aa10.8□□□□□ -0.68
LRRC28-211ENST00000558890 NBPF1Q3BBV0 1214 aa10.8□□□□□ -0.68
LRRC28-211ENST00000558890 PTCH1Q13635 1447 aa10.8□□□□□ -0.68
LRRC28-211ENST00000558890 YTHDC2Q9H6S0 1430 aaKnown RBP10.8□□□□□ -0.68
LRRC28-211ENST00000558890 NBPF8Q3BBV2 869 aa10.79□□□□□ -0.68
LRRC28-211ENST00000558890 WAPLQ7Z5K2 1190 aa10.79□□□□□ -0.68
LRRC28-211ENST00000558890 PLEKHH1Q9ULM0 1364 aa10.78□□□□□ -0.68
LRRC28-211ENST00000558890 ARHGEF28Q8N1W1 1705 aaKnown RBP10.78□□□□□ -0.68
LRRC28-211ENST00000558890 SLAIN2Q9P270 581 aa10.78□□□□□ -0.68
LRRC28-211ENST00000558890 FAM135BQ49AJ0 1406 aa10.77□□□□□ -0.68
LRRC28-211ENST00000558890 SLC24A1O60721 1099 aa10.77□□□□□ -0.69
LRRC28-211ENST00000558890 STK26Q9P289 416 aa10.77□□□□□ -0.69
LRRC28-211ENST00000558890 EIF3AQ14152 1382 aaKnown RBP10.77□□□□□ -0.69
LRRC28-211ENST00000558890 SBNO2Q9Y2G9 1366 aa10.77□□□□□ -0.69
LRRC28-211ENST00000558890 YTHDC1Q96MU7 727 aaKnown RBP10.76□□□□□ -0.69
LRRC28-211ENST00000558890 ROCK2O75116 1388 aaKnown RBP10.76□□□□□ -0.69
LRRC28-211ENST00000558890 ADGRL3Q9HAR2 1447 aa10.75□□□□□ -0.69
LRRC28-211ENST00000558890 ADGRB2O60241 1585 aa10.75□□□□□ -0.69
LRRC28-211ENST00000558890 MSH6P52701 1360 aa10.75□□□□□ -0.69
LRRC28-211ENST00000558890 DCCP43146 1447 aa10.75□□□□□ -0.69
LRRC28-211ENST00000558890 PIP4K2BP78356 416 aa10.74□□□□□ -0.69
LRRC28-211ENST00000558890 CADPS2Q86UW7 1296 aa10.74□□□□□ -0.69
LRRC28-211ENST00000558890 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.73□□□□□ -0.69
LRRC28-211ENST00000558890 HSPA1LP34931 641 aa10.73□□□□□ -0.69
LRRC28-211ENST00000558890 PRAM1Q96QH2 718 aa10.73□□□□□ -0.69
LRRC28-211ENST00000558890 TRAK1Q9UPV9 953 aa10.73□□□□□ -0.69
LRRC28-211ENST00000558890 MST1RQ04912 1400 aa10.73□□□□□ -0.69
LRRC28-211ENST00000558890 BRINP3Q76B58 766 aa10.72□□□□□ -0.69
LRRC28-211ENST00000558890 ATF3P18847 181 aa10.71□□□□□ -0.69
LRRC28-211ENST00000558890 QRICH2Q9H0J4 1663 aa10.71□□□□□ -0.69
LRRC28-211ENST00000558890 CDC42BPGQ6DT37 1551 aa10.7□□□□□ -0.7
LRRC28-211ENST00000558890 C1orf167Q5SNV9 1468 aa10.7□□□□□ -0.7
LRRC28-211ENST00000558890 CARD11Q9BXL7 1154 aa10.7□□□□□ -0.7
LRRC28-211ENST00000558890 USP47Q96K76 1375 aa10.69□□□□□ -0.7
LRRC28-211ENST00000558890 C14orf37Q86TY3 774 aa10.69□□□□□ -0.7
LRRC28-211ENST00000558890 ORAI2Q96SN7 254 aa10.69□□□□□ -0.7
LRRC28-211ENST00000558890 GTF3C3Q9Y5Q9 886 aa10.69□□□□□ -0.7
LRRC28-211ENST00000558890 NALCNQ8IZF0 1738 aa10.69□□□□□ -0.7
LRRC28-211ENST00000558890 SAFB2Q14151 953 aaKnown RBP eCLIP10.68□□□□□ -0.7
LRRC28-211ENST00000558890 PUS7Q96PZ0 661 aaKnown RBP10.68□□□□□ -0.7
LRRC28-211ENST00000558890 EIF4G2P78344 907 aaKnown RBP eCLIP10.67□□□□□ -0.7
LRRC28-211ENST00000558890 PRR36Q9H6K5 1346 aa10.66□□□□□ -0.7
LRRC28-211ENST00000558890 WASLO00401 505 aaPredicted RBP10.66□□□□□ -0.7
LRRC28-211ENST00000558890 DDX17Q92841 729 aaKnown RBP10.66□□□□□ -0.7
LRRC28-211ENST00000558890 POGKQ9P215 609 aa10.66□□□□□ -0.7
LRRC28-211ENST00000558890 MINK1Q8N4C8 1332 aaPredicted RBP10.65□□□□□ -0.7
LRRC28-211ENST00000558890 CENPJQ9HC77 1338 aaPredicted RBP10.65□□□□□ -0.7
LRRC28-211ENST00000558890 ITSN1Q15811 1721 aa10.65□□□□□ -0.7
LRRC28-211ENST00000558890 HIRIP3Q9BW71 556 aaPredicted RBP10.65□□□□□ -0.7
LRRC28-211ENST00000558890 ROBO1Q9Y6N7 1651 aa10.65□□□□□ -0.7
LRRC28-211ENST00000558890 FMN2Q9NZ56 1722 aa10.64□□□□□ -0.71
LRRC28-211ENST00000558890 ANKARQ7Z5J8 1434 aa10.64□□□□□ -0.71
LRRC28-211ENST00000558890 SOS2Q07890 1332 aaPredicted RBP10.63□□□□□ -0.71
LRRC28-211ENST00000558890 NUTM2FA1L443 756 aa10.63□□□□□ -0.71
LRRC28-211ENST00000558890 CDK19Q9BWU1 502 aa10.63□□□□□ -0.71
LRRC28-211ENST00000558890 NINLQ9Y2I6 1382 aa10.63□□□□□ -0.71
LRRC28-211ENST00000558890 TOPAZ1Q8N9V7 1692 aa10.63□□□□□ -0.71
LRRC28-211ENST00000558890 AHDC1Q5TGY3 1603 aaPredicted RBP10.62□□□□□ -0.71
LRRC28-211ENST00000558890 DDX10Q13206 875 aaKnown RBP10.62□□□□□ -0.71
LRRC28-211ENST00000558890 CDCA8Q53HL2 280 aa10.62□□□□□ -0.71
LRRC28-211ENST00000558890 ESCO1Q5FWF5 840 aa10.62□□□□□ -0.71
LRRC28-211ENST00000558890 TESK2Q96S53 571 aa10.62□□□□□ -0.71
LRRC28-211ENST00000558890 TULP4Q9NRJ4 1543 aa10.62□□□□□ -0.71
LRRC28-211ENST00000558890 FOXO3O43524 673 aa10.61□□□□□ -0.71
LRRC28-211ENST00000558890 POTEDQ86YR6 584 aa10.61□□□□□ -0.71
LRRC28-211ENST00000558890 NUDT16Q96DE0 195 aaKnown RBP10.61□□□□□ -0.71
LRRC28-211ENST00000558890 KIF1AQ12756 1690 aa10.6□□□□□ -0.71
LRRC28-211ENST00000558890 COL16A1Q07092 1604 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-211ENST00000558890 USP32Q8NFA0 1604 aa10.6□□□□□ -0.71
LRRC28-211ENST00000558890 PLEKHG3A1L390 1219 aa10.6□□□□□ -0.71
LRRC28-211ENST00000558890 ANP32CO43423 234 aa10.6□□□□□ -0.71
LRRC28-211ENST00000558890 PHF8Q9UPP1 1060 aa10.6□□□□□ -0.71
LRRC28-211ENST00000558890 ATAD2Q6PL18 1390 aa10.6□□□□□ -0.71
LRRC28-211ENST00000558890 EVC2Q86UK5 1308 aa10.59□□□□□ -0.71
LRRC28-211ENST00000558890 ST20-MTHFSA0A0A6YYL1 179 aa10.59□□□□□ -0.71
LRRC28-211ENST00000558890 TMF1P82094 1093 aa10.59□□□□□ -0.71
LRRC28-211ENST00000558890 PXDNQ92626 1479 aa10.59□□□□□ -0.71
LRRC28-211ENST00000558890 MYOM1P52179 1685 aa10.58□□□□□ -0.72
LRRC28-211ENST00000558890 ATP7BP35670 1465 aa10.58□□□□□ -0.72
LRRC28-211ENST00000558890 DCAF8L1A6NGE4 600 aa10.58□□□□□ -0.72
LRRC28-211ENST00000558890 HSPA5P11021 654 aaKnown RBP10.58□□□□□ -0.72
LRRC28-211ENST00000558890 PELP1Q8IZL8 1130 aaKnown RBP10.58□□□□□ -0.72
LRRC28-211ENST00000558890 LRRC59Q96AG4 307 aaKnown RBP10.58□□□□□ -0.72
LRRC28-211ENST00000558890 NHSL1Q5SYE7 1610 aa10.58□□□□□ -0.72
LRRC28-211ENST00000558890 JCADQ9P266 1359 aa10.57□□□□□ -0.72
LRRC28-211ENST00000558890 CCER2I3L3R5 266 aa10.57□□□□□ -0.72
LRRC28-211ENST00000558890 PMFBP1Q8TBY8 1022 aa10.57□□□□□ -0.72
LRRC28-211ENST00000558890 CABP2Q9NPB3 220 aa10.57□□□□□ -0.72
LRRC28-211ENST00000558890 CCDC61Q9Y6R9 512 aa10.57□□□□□ -0.72
LRRC28-211ENST00000558890 NPHP3Q7Z494 1330 aa10.57□□□□□ -0.72
LRRC28-211ENST00000558890 POLR3AO14802 1390 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-211ENST00000558890 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-211ENST00000558890 KRT28Q7Z3Y7 464 aa10.56□□□□□ -0.72
LRRC28-211ENST00000558890 RGS17Q9UGC6 210 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-211ENST00000558890 RGPD8O14715 1765 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-211ENST00000558890 SPATA31A3Q5VYP0 1347 aa10.56□□□□□ -0.72
LRRC28-211ENST00000558890 PNPLA6Q8IY17 1366 aa10.55□□□□□ -0.72
LRRC28-211ENST00000558890 XPCQ01831 940 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms