RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 TBX22Q9Y458 520 aa9.4□□□□□ -0.9
TRPM1-204ENST00000557948 ADGRB3O60242 1522 aa9.4□□□□□ -0.91
TRPM1-204ENST00000557948 CAMTA1Q9Y6Y1 1673 aa9.39□□□□□ -0.91
TRPM1-204ENST00000557948 GLI3P10071 1580 aa9.39□□□□□ -0.91
TRPM1-204ENST00000557948 EN1Q05925 392 aaPredicted RBP9.39□□□□□ -0.91
TRPM1-204ENST00000557948 RALGAPBQ86X10 1494 aa9.39□□□□□ -0.91
TRPM1-204ENST00000557948 FYCO1Q9BQS8 1478 aa9.39□□□□□ -0.91
TRPM1-204ENST00000557948 CHD4Q14839 1912 aa9.39□□□□□ -0.91
TRPM1-204ENST00000557948 NINLQ9Y2I6 1382 aa9.38□□□□□ -0.91
TRPM1-204ENST00000557948 HDGFP51858 240 aaKnown RBP9.38□□□□□ -0.91
TRPM1-204ENST00000557948 SEPT12Q8IYM1 358 aa9.38□□□□□ -0.91
TRPM1-204ENST00000557948 MTUS2Q5JR59 1369 aa9.37□□□□□ -0.91
TRPM1-204ENST00000557948 RGPD1P0DJD0 1748 aa9.37□□□□□ -0.91
TRPM1-204ENST00000557948 KRT27Q7Z3Y8 459 aa9.37□□□□□ -0.91
TRPM1-204ENST00000557948 COL22A1Q8NFW1 1626 aaPredicted RBP9.37□□□□□ -0.91
TRPM1-204ENST00000557948 MYO5BQ9ULV0 1848 aa9.36□□□□□ -0.91
TRPM1-204ENST00000557948 PIK3R4Q99570 1358 aa9.36□□□□□ -0.91
TRPM1-204ENST00000557948 UNC5CLQ8IV45 518 aa9.35□□□□□ -0.91
TRPM1-204ENST00000557948 EHBP1L1Q8N3D4 1523 aa9.35□□□□□ -0.91
TRPM1-204ENST00000557948 LAMC1P11047 1609 aa9.34□□□□□ -0.91
TRPM1-204ENST00000557948 ARHGEF5Q12774 1597 aa9.34□□□□□ -0.91
TRPM1-204ENST00000557948 ZFYVE9O95405 1425 aa9.34□□□□□ -0.91
TRPM1-204ENST00000557948 RIMS2Q9UQ26 1411 aa9.34□□□□□ -0.91
TRPM1-204ENST00000557948 GIGYF1O75420 1035 aaPredicted RBP9.34□□□□□ -0.91
TRPM1-204ENST00000557948 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
TRPM1-204ENST00000557948 AMOTL2Q9Y2J4 779 aa9.34□□□□□ -0.91
TRPM1-204ENST00000557948 TRPM2O94759 1503 aa9.34□□□□□ -0.91
TRPM1-204ENST00000557948 SOS2Q07890 1332 aaPredicted RBP9.33□□□□□ -0.92
TRPM1-204ENST00000557948 SPON1Q9HCB6 807 aa9.33□□□□□ -0.92
TRPM1-204ENST00000557948 MYOM2P54296 1465 aa9.33□□□□□ -0.92
TRPM1-204ENST00000557948 RPRD2Q5VT52 1461 aaKnown RBP9.33□□□□□ -0.92
TRPM1-204ENST00000557948 A0A0G2JS52 829 aa9.32□□□□□ -0.92
TRPM1-204ENST00000557948 SLC52A1Q9NWF4 448 aa9.32□□□□□ -0.92
TRPM1-204ENST00000557948 ADAMTS13Q76LX8 1427 aa9.31□□□□□ -0.92
TRPM1-204ENST00000557948 EZH2Q15910 746 aaKnown RBP9.31□□□□□ -0.92
TRPM1-204ENST00000557948 KANK1Q14678 1352 aa9.31□□□□□ -0.92
TRPM1-204ENST00000557948 GCC2Q8IWJ2 1684 aa9.31□□□□□ -0.92
TRPM1-204ENST00000557948 DUOX2Q9NRD8 1548 aa9.31□□□□□ -0.92
TRPM1-204ENST00000557948 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRPM1-204ENST00000557948 CCDC9Q9Y3X0 531 aaKnown RBP9.3□□□□□ -0.92
TRPM1-204ENST00000557948 TNS1Q9HBL0 1735 aaKnown RBP9.3□□□□□ -0.92
TRPM1-204ENST00000557948 SLIT2O94813 1529 aa9.3□□□□□ -0.92
TRPM1-204ENST00000557948 DISP2A7MBM2 1401 aa9.3□□□□□ -0.92
TRPM1-204ENST00000557948 C1orf167Q5SNV9 1468 aa9.29□□□□□ -0.92
TRPM1-204ENST00000557948 UTRNP46939 3433 aa9.29□□□□□ -0.92
TRPM1-204ENST00000557948 KCNQ2O43526 872 aa9.29□□□□□ -0.92
TRPM1-204ENST00000557948 ONECUT3O60422 494 aaPredicted RBP9.29□□□□□ -0.92
TRPM1-204ENST00000557948 PTPRUQ92729 1446 aa9.29□□□□□ -0.92
TRPM1-204ENST00000557948 ADGRL3Q9HAR2 1447 aa9.29□□□□□ -0.92
TRPM1-204ENST00000557948 ADGRB2O60241 1585 aa9.29□□□□□ -0.92
TRPM1-204ENST00000557948 NALCNQ8IZF0 1738 aa9.28□□□□□ -0.92
TRPM1-204ENST00000557948 XRN1Q8IZH2 1706 aaKnown RBP9.28□□□□□ -0.92
TRPM1-204ENST00000557948 VPS72Q15906 364 aa9.28□□□□□ -0.92
TRPM1-204ENST00000557948 NBPF8Q3BBV2 869 aa9.28□□□□□ -0.92
TRPM1-204ENST00000557948 NBPF14Q5TI25 921 aa9.28□□□□□ -0.92
TRPM1-204ENST00000557948 NOS1P29475 1434 aa9.28□□□□□ -0.92
TRPM1-204ENST00000557948 SPDYE2BA6NHP3 402 aa9.27□□□□□ -0.93
TRPM1-204ENST00000557948 SLC34A2O95436 690 aa9.27□□□□□ -0.93
TRPM1-204ENST00000557948 SPDYE6P0CI01 402 aa9.27□□□□□ -0.93
TRPM1-204ENST00000557948 SPDYE2Q495Y8 402 aa9.27□□□□□ -0.93
TRPM1-204ENST00000557948 ORAI2Q96SN7 254 aa9.27□□□□□ -0.93
TRPM1-204ENST00000557948 SSUH2Q9Y2M2 353 aa9.27□□□□□ -0.93
TRPM1-204ENST00000557948 CEP162Q5TB80 1403 aa9.27□□□□□ -0.93
TRPM1-204ENST00000557948 TMEM131LA2VDJ0 1609 aa9.27□□□□□ -0.93
TRPM1-204ENST00000557948 CAMKK2Q96RR4 588 aa9.26□□□□□ -0.93
TRPM1-204ENST00000557948 PARD3Q8TEW0 1356 aa9.25□□□□□ -0.93
TRPM1-204ENST00000557948 PTPN23Q9H3S7 1636 aa9.25□□□□□ -0.93
TRPM1-204ENST00000557948 LMTK2Q8IWU2 1503 aa9.25□□□□□ -0.93
TRPM1-204ENST00000557948 ERBINQ96RT1 1412 aa9.24□□□□□ -0.93
TRPM1-204ENST00000557948 RREB1Q92766 1687 aa9.24□□□□□ -0.93
TRPM1-204ENST00000557948 CHGAP10645 457 aaKnown RBP9.24□□□□□ -0.93
TRPM1-204ENST00000557948 FAM182BQ5T319 152 aa9.24□□□□□ -0.93
TRPM1-204ENST00000557948 NUP188Q5SRE5 1749 aa9.24□□□□□ -0.93
TRPM1-204ENST00000557948 NWD2Q9ULI1 1742 aa9.24□□□□□ -0.93
TRPM1-204ENST00000557948 NPHP3Q7Z494 1330 aa9.24□□□□□ -0.93
TRPM1-204ENST00000557948 PLCH1Q4KWH8 1693 aa9.23□□□□□ -0.93
TRPM1-204ENST00000557948 USP32Q8NFA0 1604 aa9.23□□□□□ -0.93
TRPM1-204ENST00000557948 NRKQ7Z2Y5 1582 aa9.22□□□□□ -0.93
TRPM1-204ENST00000557948 APBA3O96018 575 aa9.22□□□□□ -0.93
TRPM1-204ENST00000557948 HAP1P54257 671 aaPredicted RBP9.22□□□□□ -0.93
TRPM1-204ENST00000557948 CACNB1Q02641 598 aaPredicted RBP9.22□□□□□ -0.93
TRPM1-204ENST00000557948 FAM98CQ17RN3 349 aaKnown RBP9.22□□□□□ -0.93
TRPM1-204ENST00000557948 KIF15Q9NS87 1388 aa9.22□□□□□ -0.93
TRPM1-204ENST00000557948 TRIM37O94972 964 aa9.21□□□□□ -0.94
TRPM1-204ENST00000557948 KLHL34Q8N239 644 aa9.21□□□□□ -0.94
TRPM1-204ENST00000557948 PCDH10Q9P2E7 1040 aa9.21□□□□□ -0.94
TRPM1-204ENST00000557948 PXDNQ92626 1479 aa9.21□□□□□ -0.94
TRPM1-204ENST00000557948 MYOM1P52179 1685 aa9.2□□□□□ -0.94
TRPM1-204ENST00000557948 XPCQ01831 940 aaPredicted RBP9.2□□□□□ -0.94
TRPM1-204ENST00000557948 ADGRL2O95490 1459 aa9.2□□□□□ -0.94
TRPM1-204ENST00000557948 FAM83GA6ND36 823 aa9.19□□□□□ -0.94
TRPM1-204ENST00000557948 RRP7BPQ9NSQ0 103 aa9.19□□□□□ -0.94
TRPM1-204ENST00000557948 HSPA6P17066 643 aa9.18□□□□□ -0.94
TRPM1-204ENST00000557948 ESCO1Q5FWF5 840 aa9.18□□□□□ -0.94
TRPM1-204ENST00000557948 FAM196AQ6ZSG2 479 aa9.18□□□□□ -0.94
TRPM1-204ENST00000557948 NRXN3Q9Y4C0 1643 aa9.18□□□□□ -0.94
TRPM1-204ENST00000557948 METP08581 1390 aa9.17□□□□□ -0.94
TRPM1-204ENST00000557948 LRPPRCP42704 1394 aaKnown RBP9.17□□□□□ -0.94
TRPM1-204ENST00000557948 FOXO3O43524 673 aa9.17□□□□□ -0.94
TRPM1-204ENST00000557948 PRELPP51888 382 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms