RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 LTBP4Q8N2S1 1624 aa12.33□□□□□ -0.43
SHC4-204ENST00000557797 C3orf80F5H4A9 247 aa12.33□□□□□ -0.44
SHC4-204ENST00000557797 TTC13Q8NBP0 860 aa12.33□□□□□ -0.44
SHC4-204ENST00000557797 NBPF3Q9H094 633 aa12.33□□□□□ -0.44
SHC4-204ENST00000557797 RBM27Q9P2N5 1060 aaKnown RBP12.33□□□□□ -0.44
SHC4-204ENST00000557797 RICTORQ6R327 1708 aa12.33□□□□□ -0.44
SHC4-204ENST00000557797 SIGLEC1Q9BZZ2 1709 aa12.33□□□□□ -0.44
SHC4-204ENST00000557797 PTPRTO14522 1441 aa12.32□□□□□ -0.44
SHC4-204ENST00000557797 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
SHC4-204ENST00000557797 GPR37O15354 613 aa12.31□□□□□ -0.44
SHC4-204ENST00000557797 PADI6Q6TGC4 694 aa12.31□□□□□ -0.44
SHC4-204ENST00000557797 BCANQ96GW7 911 aa12.31□□□□□ -0.44
SHC4-204ENST00000557797 STAC3Q96MF2 364 aa12.3□□□□□ -0.44
SHC4-204ENST00000557797 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
SHC4-204ENST00000557797 ZMYM4Q5VZL5 1548 aa12.3□□□□□ -0.44
SHC4-204ENST00000557797 AKNAQ7Z591 1439 aa12.29□□□□□ -0.44
SHC4-204ENST00000557797 GOLGA3Q08378 1498 aa12.29□□□□□ -0.44
SHC4-204ENST00000557797 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
SHC4-204ENST00000557797 PACS2Q86VP3 889 aa12.29□□□□□ -0.44
SHC4-204ENST00000557797 FHOD3Q2V2M9 1422 aa12.28□□□□□ -0.44
SHC4-204ENST00000557797 DENND4BO75064 1496 aaPredicted RBP12.27□□□□□ -0.44
SHC4-204ENST00000557797 RAPGEF2Q9Y4G8 1499 aa12.27□□□□□ -0.44
SHC4-204ENST00000557797 FCHSD2O94868 740 aa12.27□□□□□ -0.45
SHC4-204ENST00000557797 LAPTM4BQ86VI4 370 aa12.27□□□□□ -0.45
SHC4-204ENST00000557797 ATP10BO94823 1461 aa12.27□□□□□ -0.45
SHC4-204ENST00000557797 ARHGEF12Q9NZN5 1544 aa12.27□□□□□ -0.45
SHC4-204ENST00000557797 SMAPO00193 183 aa12.26□□□□□ -0.45
SHC4-204ENST00000557797 KCTD12Q96CX2 325 aaKnown RBP12.26□□□□□ -0.45
SHC4-204ENST00000557797 EFCAB5A4FU69 1503 aa12.26□□□□□ -0.45
SHC4-204ENST00000557797 TATDN2Q93075 761 aa12.25□□□□□ -0.45
SHC4-204ENST00000557797 MAGI2Q86UL8 1455 aa12.25□□□□□ -0.45
SHC4-204ENST00000557797 ZFYVE16Q7Z3T8 1539 aa12.25□□□□□ -0.45
SHC4-204ENST00000557797 CTTNBP2Q8WZ74 1663 aa12.25□□□□□ -0.45
SHC4-204ENST00000557797 MED1Q15648 1581 aaPredicted RBP12.24□□□□□ -0.45
SHC4-204ENST00000557797 FAM98CQ17RN3 349 aaKnown RBP12.24□□□□□ -0.45
SHC4-204ENST00000557797 UHRF1BP1Q6BDS2 1440 aa12.24□□□□□ -0.45
SHC4-204ENST00000557797 NBPF26B4DH59 902 aa12.23□□□□□ -0.45
SHC4-204ENST00000557797 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHC4-204ENST00000557797 ZFRQ96KR1 1074 aaKnown RBP12.23□□□□□ -0.45
SHC4-204ENST00000557797 PNMA3Q9UL41 463 aa12.23□□□□□ -0.45
SHC4-204ENST00000557797 HIC1Q14526 733 aa12.22□□□□□ -0.45
SHC4-204ENST00000557797 NUDT18Q6ZVK8 323 aa12.22□□□□□ -0.45
SHC4-204ENST00000557797 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
SHC4-204ENST00000557797 WNT2BQ93097 391 aa12.22□□□□□ -0.45
SHC4-204ENST00000557797 CFAP74Q9C0B2 1584 aa12.22□□□□□ -0.45
SHC4-204ENST00000557797 GOLGA8CPA6NN73 597 aa12.21□□□□□ -0.45
SHC4-204ENST00000557797 FECHP22830 423 aa12.21□□□□□ -0.45
SHC4-204ENST00000557797 TULP1O00294 542 aaPredicted RBP12.2□□□□□ -0.46
SHC4-204ENST00000557797 THSD4Q6ZMP0 1018 aa12.2□□□□□ -0.46
SHC4-204ENST00000557797 EYA1Q99502 592 aa12.19□□□□□ -0.46
SHC4-204ENST00000557797 ADGRG1Q9Y653 693 aa12.19□□□□□ -0.46
SHC4-204ENST00000557797 GNPATO15228 680 aa12.18□□□□□ -0.46
SHC4-204ENST00000557797 FAM161AQ3B820 660 aa12.18□□□□□ -0.46
SHC4-204ENST00000557797 MLECQ14165 292 aa12.17□□□□□ -0.46
SHC4-204ENST00000557797 LMOD2Q6P5Q4 547 aa12.17□□□□□ -0.46
SHC4-204ENST00000557797 ANKK1Q8NFD2 765 aa12.17□□□□□ -0.46
SHC4-204ENST00000557797 HECW1Q76N89 1606 aa12.17□□□□□ -0.46
SHC4-204ENST00000557797 UBAP1LF5GYI3 381 aa12.16□□□□□ -0.46
SHC4-204ENST00000557797 SUPT5HO00267 1087 aaKnown RBP12.16□□□□□ -0.46
SHC4-204ENST00000557797 CEBPAP49715 358 aaPredicted RBP12.16□□□□□ -0.46
SHC4-204ENST00000557797 BCAMP50895 628 aa12.16□□□□□ -0.46
SHC4-204ENST00000557797 NCOA1Q15788 1441 aa12.16□□□□□ -0.46
SHC4-204ENST00000557797 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
SHC4-204ENST00000557797 HCSTQ9UBK5 93 aa12.15□□□□□ -0.46
SHC4-204ENST00000557797 ATP10AO60312 1499 aa12.14□□□□□ -0.47
SHC4-204ENST00000557797 C9orf84Q5VXU9 1444 aa12.13□□□□□ -0.47
SHC4-204ENST00000557797 ARID3CA6NKF2 412 aa12.13□□□□□ -0.47
SHC4-204ENST00000557797 PTPN5P54829 565 aa12.13□□□□□ -0.47
SHC4-204ENST00000557797 C3P01024 1663 aa12.13□□□□□ -0.47
SHC4-204ENST00000557797 SAMD7Q7Z3H4 446 aa12.12□□□□□ -0.47
SHC4-204ENST00000557797 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
SHC4-204ENST00000557797 FAM9AQ8IZU1 332 aaPredicted RBP12.1□□□□□ -0.47
SHC4-204ENST00000557797 LRCH3Q96II8 777 aa12.1□□□□□ -0.47
SHC4-204ENST00000557797 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.1□□□□□ -0.47
SHC4-204ENST00000557797 RBM46Q8TBY0 533 aaKnown RBP12.09□□□□□ -0.47
SHC4-204ENST00000557797 PXYLP1Q8TE99 480 aa12.09□□□□□ -0.47
SHC4-204ENST00000557797 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHC4-204ENST00000557797 HSPA1LP34931 641 aa12.08□□□□□ -0.48
SHC4-204ENST00000557797 METTL3Q86U44 580 aaKnown RBP12.08□□□□□ -0.48
SHC4-204ENST00000557797 TRAPPC8Q9Y2L5 1435 aa12.08□□□□□ -0.48
SHC4-204ENST00000557797 ZNF335Q9H4Z2 1342 aaPredicted RBP12.08□□□□□ -0.48
SHC4-204ENST00000557797 SWT1Q5T5J6 900 aaKnown RBP12.07□□□□□ -0.48
SHC4-204ENST00000557797 WBP1LQ9NX94 342 aa12.07□□□□□ -0.48
SHC4-204ENST00000557797 CAMSAP1Q5T5Y3 1602 aa12.07□□□□□ -0.48
SHC4-204ENST00000557797 NUP153P49790 1475 aaKnown RBP12.07□□□□□ -0.48
SHC4-204ENST00000557797 REREQ9P2R6 1566 aa12.06□□□□□ -0.48
SHC4-204ENST00000557797 RCCD1A6NED2 376 aa12.06□□□□□ -0.48
SHC4-204ENST00000557797 HPS5Q9UPZ3 1129 aa12.06□□□□□ -0.48
SHC4-204ENST00000557797 SCAPERQ9BY12 1400 aa12.05□□□□□ -0.48
SHC4-204ENST00000557797 OATP04181 439 aa12.05□□□□□ -0.48
SHC4-204ENST00000557797 DNAJB2P25686 324 aa12.05□□□□□ -0.48
SHC4-204ENST00000557797 TMEM134Q9H6X4 195 aa12.05□□□□□ -0.48
SHC4-204ENST00000557797 TSR3Q9UJK0 312 aaKnown RBP12.05□□□□□ -0.48
SHC4-204ENST00000557797 SAMD9Q5K651 1589 aa12.05□□□□□ -0.48
SHC4-204ENST00000557797 MAP2K5Q13163 448 aa12.04□□□□□ -0.48
SHC4-204ENST00000557797 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
SHC4-204ENST00000557797 PHOX2BQ99453 314 aa12.04□□□□□ -0.48
SHC4-204ENST00000557797 AGLP35573 1532 aa12.02□□□□□ -0.48
SHC4-204ENST00000557797 NPATQ14207 1427 aa12.02□□□□□ -0.49
SHC4-204ENST00000557797 PLA2R1Q13018 1463 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms