RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 KDM2AQ9Y2K7 1162 aa12.04□□□□□ -0.48
PSEN1-223ENST00000557511 ADGRF5Q8IZF2 1346 aa12.04□□□□□ -0.48
PSEN1-223ENST00000557511 NCOA3Q9Y6Q9 1424 aa12.03□□□□□ -0.48
PSEN1-223ENST00000557511 ATF3P18847 181 aa12.03□□□□□ -0.48
PSEN1-223ENST00000557511 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
PSEN1-223ENST00000557511 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
PSEN1-223ENST00000557511 NWD1Q149M9 1564 aa12.03□□□□□ -0.48
PSEN1-223ENST00000557511 METP08581 1390 aa12.03□□□□□ -0.48
PSEN1-223ENST00000557511 STRCP1A6NGW2 1772 aa12.01□□□□□ -0.49
PSEN1-223ENST00000557511 PPLO60437 1756 aa12.01□□□□□ -0.49
PSEN1-223ENST00000557511 CADPS2Q86UW7 1296 aa12.01□□□□□ -0.49
PSEN1-223ENST00000557511 C19orf44Q9H6X5 657 aa12.01□□□□□ -0.49
PSEN1-223ENST00000557511 ALKQ9UM73 1620 aa12□□□□□ -0.49
PSEN1-223ENST00000557511 CHD2O14647 1828 aaKnown RBP12□□□□□ -0.49
PSEN1-223ENST00000557511 NEUROD1Q13562 356 aa12□□□□□ -0.49
PSEN1-223ENST00000557511 PCGF6Q9BYE7 350 aa12□□□□□ -0.49
PSEN1-223ENST00000557511 STK26Q9P289 416 aa12□□□□□ -0.49
PSEN1-223ENST00000557511 DHX57Q6P158 1386 aaKnown RBP12□□□□□ -0.49
PSEN1-223ENST00000557511 MYOM2P54296 1465 aa12□□□□□ -0.49
PSEN1-223ENST00000557511 C14orf93Q9H972 538 aaKnown RBP11.99□□□□□ -0.49
PSEN1-223ENST00000557511 FARP1Q9Y4F1 1045 aaPredicted RBP11.99□□□□□ -0.49
PSEN1-223ENST00000557511 PTPRUQ92729 1446 aa11.99□□□□□ -0.49
PSEN1-223ENST00000557511 NRXN3Q9Y4C0 1643 aa11.99□□□□□ -0.49
PSEN1-223ENST00000557511 PIK3C2GO75747 1445 aa11.98□□□□□ -0.49
PSEN1-223ENST00000557511 CFAP70Q5T0N1 1121 aa11.97□□□□□ -0.49
PSEN1-223ENST00000557511 TMEM132EQ6IEE7 984 aa11.97□□□□□ -0.49
PSEN1-223ENST00000557511 SLAIN2Q9P270 581 aa11.97□□□□□ -0.49
PSEN1-223ENST00000557511 PTCH1Q13635 1447 aa11.96□□□□□ -0.49
PSEN1-223ENST00000557511 LRPPRCP42704 1394 aaKnown RBP11.96□□□□□ -0.49
PSEN1-223ENST00000557511 HAX1O00165 279 aa11.96□□□□□ -0.49
PSEN1-223ENST00000557511 IFT172Q9UG01 1749 aa11.95□□□□□ -0.5
PSEN1-223ENST00000557511 SIN3AQ96ST3 1273 aa11.95□□□□□ -0.5
PSEN1-223ENST00000557511 POGKQ9P215 609 aa11.95□□□□□ -0.5
PSEN1-223ENST00000557511 LAMC1P11047 1609 aa11.94□□□□□ -0.5
PSEN1-223ENST00000557511 VASPP50552 380 aaPredicted RBP11.94□□□□□ -0.5
PSEN1-223ENST00000557511 NRXN1Q9ULB1 1477 aa11.94□□□□□ -0.5
PSEN1-223ENST00000557511 XRN1Q8IZH2 1706 aaKnown RBP11.94□□□□□ -0.5
PSEN1-223ENST00000557511 DCCP43146 1447 aa11.94□□□□□ -0.5
PSEN1-223ENST00000557511 FAM135BQ49AJ0 1406 aa11.94□□□□□ -0.5
PSEN1-223ENST00000557511 YTHDC2Q9H6S0 1430 aaKnown RBP11.94□□□□□ -0.5
PSEN1-223ENST00000557511 TONSLQ96HA7 1378 aa11.93□□□□□ -0.5
PSEN1-223ENST00000557511 ABCC11Q96J66 1382 aa11.93□□□□□ -0.5
PSEN1-223ENST00000557511 HSPA1LP34931 641 aa11.93□□□□□ -0.5
PSEN1-223ENST00000557511 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
PSEN1-223ENST00000557511 ADGRL3Q9HAR2 1447 aa11.93□□□□□ -0.5
PSEN1-223ENST00000557511 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
PSEN1-223ENST00000557511 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-223ENST00000557511 L3MBTL2Q969R5 705 aa11.91□□□□□ -0.5
PSEN1-223ENST00000557511 TRAK1Q9UPV9 953 aa11.91□□□□□ -0.5
PSEN1-223ENST00000557511 PRAG1Q86YV5 1406 aa11.91□□□□□ -0.5
PSEN1-223ENST00000557511 XIRP1Q702N8 1843 aaKnown RBP11.9□□□□□ -0.5
PSEN1-223ENST00000557511 TECPR2O15040 1411 aa11.9□□□□□ -0.5
PSEN1-223ENST00000557511 WAPLQ7Z5K2 1190 aa11.9□□□□□ -0.5
PSEN1-223ENST00000557511 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
PSEN1-223ENST00000557511 SAFB2Q14151 953 aaKnown RBP eCLIP11.89□□□□□ -0.51
PSEN1-223ENST00000557511 KLHL34Q8N239 644 aa11.89□□□□□ -0.51
PSEN1-223ENST00000557511 PRAM1Q96QH2 718 aa11.89□□□□□ -0.51
PSEN1-223ENST00000557511 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-223ENST00000557511 CCER1Q8TC90 406 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-223ENST00000557511 CLSPNQ9HAW4 1339 aa11.86□□□□□ -0.51
PSEN1-223ENST00000557511 ASXL1Q8IXJ9 1541 aa11.86□□□□□ -0.51
PSEN1-223ENST00000557511 ESCO1Q5FWF5 840 aa11.86□□□□□ -0.51
PSEN1-223ENST00000557511 BRINP3Q76B58 766 aa11.86□□□□□ -0.51
PSEN1-223ENST00000557511 ROBO1Q9Y6N7 1651 aa11.86□□□□□ -0.51
PSEN1-223ENST00000557511 KNDC1Q76NI1 1749 aa11.86□□□□□ -0.51
PSEN1-223ENST00000557511 EIF3AQ14152 1382 aaKnown RBP11.85□□□□□ -0.51
PSEN1-223ENST00000557511 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
PSEN1-223ENST00000557511 MST1RQ04912 1400 aa11.85□□□□□ -0.51
PSEN1-223ENST00000557511 ROCK2O75116 1388 aaKnown RBP11.84□□□□□ -0.51
PSEN1-223ENST00000557511 PLEKHH1Q9ULM0 1364 aa11.84□□□□□ -0.51
PSEN1-223ENST00000557511 NUTM2FA1L443 756 aa11.84□□□□□ -0.51
PSEN1-223ENST00000557511 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
PSEN1-223ENST00000557511 MINK1Q8N4C8 1332 aaPredicted RBP11.84□□□□□ -0.51
PSEN1-223ENST00000557511 ADGRB1O14514 1584 aa11.84□□□□□ -0.51
PSEN1-223ENST00000557511 C1orf167Q5SNV9 1468 aa11.83□□□□□ -0.52
PSEN1-223ENST00000557511 NALCNQ8IZF0 1738 aa11.83□□□□□ -0.52
PSEN1-223ENST00000557511 CDC42BPGQ6DT37 1551 aa11.83□□□□□ -0.52
PSEN1-223ENST00000557511 NBPF1Q3BBV0 1214 aa11.82□□□□□ -0.52
PSEN1-223ENST00000557511 LRRC59Q96AG4 307 aaKnown RBP11.82□□□□□ -0.52
PSEN1-223ENST00000557511 KIAA1210Q9ULL0 1709 aa11.82□□□□□ -0.52
PSEN1-223ENST00000557511 NPHP3Q7Z494 1330 aa11.82□□□□□ -0.52
PSEN1-223ENST00000557511 JCADQ9P266 1359 aa11.81□□□□□ -0.52
PSEN1-223ENST00000557511 DISP3Q9P2K9 1392 aa11.81□□□□□ -0.52
PSEN1-223ENST00000557511 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
PSEN1-223ENST00000557511 ORAI2Q96SN7 254 aa11.81□□□□□ -0.52
PSEN1-223ENST00000557511 HIRIP3Q9BW71 556 aaPredicted RBP11.81□□□□□ -0.52
PSEN1-223ENST00000557511 TIMELESSQ9UNS1 1208 aa11.81□□□□□ -0.52
PSEN1-223ENST00000557511 CENPJQ9HC77 1338 aaPredicted RBP11.81□□□□□ -0.52
PSEN1-223ENST00000557511 C19orf67A6NJJ6 358 aa11.8□□□□□ -0.52
PSEN1-223ENST00000557511 PAK3O75914 559 aaPredicted RBP11.8□□□□□ -0.52
PSEN1-223ENST00000557511 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
PSEN1-223ENST00000557511 PHLPP1O60346 1717 aa11.8□□□□□ -0.52
PSEN1-223ENST00000557511 WASLO00401 505 aaPredicted RBP11.79□□□□□ -0.52
PSEN1-223ENST00000557511 MEX3CQ5U5Q3 659 aaKnown RBP11.79□□□□□ -0.52
PSEN1-223ENST00000557511 AHDC1Q5TGY3 1603 aaPredicted RBP11.78□□□□□ -0.52
PSEN1-223ENST00000557511 PSME1Q06323 249 aa11.78□□□□□ -0.52
PSEN1-223ENST00000557511 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
PSEN1-223ENST00000557511 SPATA31A6Q5VVP1 1343 aa11.78□□□□□ -0.52
PSEN1-223ENST00000557511 ANKARQ7Z5J8 1434 aa11.77□□□□□ -0.52
PSEN1-223ENST00000557511 FOXO3O43524 673 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms