RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 REPIN1Q9BWE0 567 aaKnown RBP8.39□□□□□ -1.07
CHD8-212ENST00000557329 TLL1O43897 1013 aa8.38□□□□□ -1.07
CHD8-212ENST00000557329 LIAT1Q6ZQX7 453 aa8.38□□□□□ -1.07
CHD8-212ENST00000557329 ABCC9O60706 1549 aa8.38□□□□□ -1.07
CHD8-212ENST00000557329 GDF9O60383 454 aa8.37□□□□□ -1.07
CHD8-212ENST00000557329 FMNL1O95466 1100 aaPredicted RBP8.37□□□□□ -1.07
CHD8-212ENST00000557329 S1PR4O95977 384 aa8.37□□□□□ -1.07
CHD8-212ENST00000557329 ZNF697Q5TEC3 545 aa8.37□□□□□ -1.07
CHD8-212ENST00000557329 SCUBE3Q8IX30 993 aa8.37□□□□□ -1.07
CHD8-212ENST00000557329 KDM4CQ9H3R0 1056 aa8.37□□□□□ -1.07
CHD8-212ENST00000557329 SPDYE5A6NIY4 337 aa8.36□□□□□ -1.07
CHD8-212ENST00000557329 HOXA2O43364 376 aa8.36□□□□□ -1.07
CHD8-212ENST00000557329 ADH1BP00325 375 aa8.36□□□□□ -1.07
CHD8-212ENST00000557329 NEUROD2Q15784 382 aa8.36□□□□□ -1.07
CHD8-212ENST00000557329 PPEF1O14829 653 aaPredicted RBP8.35□□□□□ -1.07
CHD8-212ENST00000557329 MS4A1P11836 297 aa8.35□□□□□ -1.07
CHD8-212ENST00000557329 TUSC1Q2TAM9 212 aa8.35□□□□□ -1.07
CHD8-212ENST00000557329 SPIRE2Q8WWL2 714 aa8.35□□□□□ -1.07
CHD8-212ENST00000557329 SPSB2Q99619 263 aa8.33□□□□□ -1.08
CHD8-212ENST00000557329 TBC1D2Q9BYX2 928 aa8.33□□□□□ -1.08
CHD8-212ENST00000557329 GOPCQ9HD26 462 aa8.33□□□□□ -1.08
CHD8-212ENST00000557329 SLC27A5Q9Y2P5 690 aa8.33□□□□□ -1.08
CHD8-212ENST00000557329 FAM187AA6NFU0 413 aa8.32□□□□□ -1.08
CHD8-212ENST00000557329 POTECB2RU33 542 aa8.32□□□□□ -1.08
CHD8-212ENST00000557329 FDX1P10109 184 aa8.32□□□□□ -1.08
CHD8-212ENST00000557329 PRPF38BQ5VTL8 546 aaKnown RBP8.32□□□□□ -1.08
CHD8-212ENST00000557329 SLC6A16Q9GZN6 736 aa8.32□□□□□ -1.08
CHD8-212ENST00000557329 PUS10Q3MIT2 529 aaKnown RBP8.31□□□□□ -1.08
CHD8-212ENST00000557329 MSS51Q4VC12 460 aa8.31□□□□□ -1.08
CHD8-212ENST00000557329 BRICD5Q6PL45 260 aa8.31□□□□□ -1.08
CHD8-212ENST00000557329 TNFRSF10AO00220 468 aa8.3□□□□□ -1.08
CHD8-212ENST00000557329 SPTLC1O15269 473 aa8.3□□□□□ -1.08
CHD8-212ENST00000557329 BRPF1P55201 1214 aaPredicted RBP8.29□□□□□ -1.08
CHD8-212ENST00000557329 SH3D19Q5HYK7 790 aa8.29□□□□□ -1.08
CHD8-212ENST00000557329 PLA2G2CQ5R387 149 aa8.29□□□□□ -1.08
CHD8-212ENST00000557329 RSBN1LQ6PCB5 846 aaPredicted RBP8.29□□□□□ -1.08
CHD8-212ENST00000557329 RIC3Q7Z5B4 369 aa8.29□□□□□ -1.08
CHD8-212ENST00000557329 RETREG3Q86VR2 466 aa8.29□□□□□ -1.08
CHD8-212ENST00000557329 THAP11Q96EK4 314 aa8.29□□□□□ -1.08
CHD8-212ENST00000557329 USB1Q9BQ65 265 aaKnown RBP8.29□□□□□ -1.08
CHD8-212ENST00000557329 MTMR2Q13614 643 aa8.28□□□□□ -1.08
CHD8-212ENST00000557329 SKIV2LQ15477 1246 aaKnown RBP8.28□□□□□ -1.08
CHD8-212ENST00000557329 ZBTB3Q9H5J0 574 aa8.28□□□□□ -1.08
CHD8-212ENST00000557329 GPBP1L1Q9HC44 474 aaPredicted RBP8.28□□□□□ -1.08
CHD8-212ENST00000557329 AAASQ9NRG9 546 aa8.28□□□□□ -1.08
CHD8-212ENST00000557329 CLK2P49760 499 aaKnown RBP8.27□□□□□ -1.09
CHD8-212ENST00000557329 LCE2AQ5TA79 106 aaPredicted RBP8.27□□□□□ -1.09
CHD8-212ENST00000557329 MYSM1Q5VVJ2 828 aa8.27□□□□□ -1.09
CHD8-212ENST00000557329 TREML4Q6UXN2 200 aa8.27□□□□□ -1.09
CHD8-212ENST00000557329 MOXD2PA6NHM9 499 aa8.26□□□□□ -1.09
CHD8-212ENST00000557329 C6orf229H3BNL8 230 aa8.26□□□□□ -1.09
CHD8-212ENST00000557329 DESI1Q6ICB0 168 aa8.26□□□□□ -1.09
CHD8-212ENST00000557329 CRIPAKQ8N1N5 446 aa8.26□□□□□ -1.09
CHD8-212ENST00000557329 PKD2L1Q9P0L9 805 aa8.26□□□□□ -1.09
CHD8-212ENST00000557329 ST8SIA5O15466 376 aa8.25□□□□□ -1.09
CHD8-212ENST00000557329 RPIAP49247 311 aa8.25□□□□□ -1.09
CHD8-212ENST00000557329 FAM117AQ9C073 453 aa8.25□□□□□ -1.09
CHD8-212ENST00000557329 PRKCSHP14314 528 aaPredicted RBP8.24□□□□□ -1.09
CHD8-212ENST00000557329 AVPP01185 164 aa8.23□□□□□ -1.09
CHD8-212ENST00000557329 NDUFV2P19404 249 aa8.23□□□□□ -1.09
CHD8-212ENST00000557329 MMP16P51512 607 aa8.23□□□□□ -1.09
CHD8-212ENST00000557329 PCMTD1Q96MG8 357 aaPredicted RBP8.23□□□□□ -1.09
CHD8-212ENST00000557329 FOXC1Q12948 553 aa8.22□□□□□ -1.09
CHD8-212ENST00000557329 RNF19BQ6ZMZ0 732 aa8.22□□□□□ -1.09
CHD8-212ENST00000557329 TOR4AQ9NXH8 423 aa8.22□□□□□ -1.09
CHD8-212ENST00000557329 NUTM2BA6NNL0 878 aaPredicted RBP8.21□□□□□ -1.1
CHD8-212ENST00000557329 NUTM2EB1AL46 878 aaPredicted RBP8.21□□□□□ -1.1
CHD8-212ENST00000557329 JUNDP17535 347 aa8.21□□□□□ -1.1
CHD8-212ENST00000557329 NUTM2DQ5VT03 806 aaPredicted RBP8.21□□□□□ -1.1
CHD8-212ENST00000557329 NUTM2AQ8IVF1 878 aaPredicted RBP8.21□□□□□ -1.1
CHD8-212ENST00000557329 ATP1B4Q9UN42 357 aaPredicted RBP8.21□□□□□ -1.1
CHD8-212ENST00000557329 PCDHGC3Q9UN70 934 aa8.21□□□□□ -1.1
CHD8-212ENST00000557329 PLEKHG3A1L390 1219 aa8.2□□□□□ -1.1
CHD8-212ENST00000557329 LILRB3O75022 631 aa8.2□□□□□ -1.1
CHD8-212ENST00000557329 DXOO77932 396 aaKnown RBP8.2□□□□□ -1.1
CHD8-212ENST00000557329 CD2BP2O95400 341 aaKnown RBP8.2□□□□□ -1.1
CHD8-212ENST00000557329 CTC1Q2NKJ3 1217 aa8.2□□□□□ -1.1
CHD8-212ENST00000557329 FAM160A2Q8N612 972 aaPredicted RBP8.2□□□□□ -1.1
CHD8-212ENST00000557329 HELBQ8NG08 1087 aaPredicted RBP8.2□□□□□ -1.1
CHD8-212ENST00000557329 ZBTB24O43167 697 aaPredicted RBP8.19□□□□□ -1.1
CHD8-212ENST00000557329 HRCP23327 699 aa8.19□□□□□ -1.1
CHD8-212ENST00000557329 GUCA2AQ02747 115 aa8.19□□□□□ -1.1
CHD8-212ENST00000557329 PTPRNQ16849 979 aa8.19□□□□□ -1.1
CHD8-212ENST00000557329 IL27Q8NEV9 243 aa8.19□□□□□ -1.1
CHD8-212ENST00000557329 PRR7Q8TB68 274 aa8.19□□□□□ -1.1
CHD8-212ENST00000557329 SMCPP49901 116 aaPredicted RBP8.18□□□□□ -1.1
CHD8-212ENST00000557329 PPP2R2DQ66LE6 453 aa8.18□□□□□ -1.1
CHD8-212ENST00000557329 HLA-CQ95604 372 aa8.18□□□□□ -1.1
CHD8-212ENST00000557329 POLR3EQ9NVU0 708 aa8.18□□□□□ -1.1
CHD8-212ENST00000557329 LIMD1Q9UGP4 676 aa8.18□□□□□ -1.1
CHD8-212ENST00000557329 AXIN1O15169 862 aa8.17□□□□□ -1.1
CHD8-212ENST00000557329 CYP4X1Q8N118 509 aa8.17□□□□□ -1.1
CHD8-212ENST00000557329 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.17□□□□□ -1.1
CHD8-212ENST00000557329 FCF1Q9Y324 198 aaKnown RBP8.17□□□□□ -1.1
CHD8-212ENST00000557329 DACH1Q9UI36 760 aa8.16□□□□□ -1.1
CHD8-212ENST00000557329 PCDHB15Q9Y5E8 787 aa8.16□□□□□ -1.1
CHD8-212ENST00000557329 WFS1O76024 890 aa8.15□□□□□ -1.1
CHD8-212ENST00000557329 TMEM259Q4ZIN3 620 aa8.15□□□□□ -1.1
CHD8-212ENST00000557329 GMPR2Q9P2T1 348 aaKnown RBP8.15□□□□□ -1.1
CHD8-212ENST00000557329 CCNYL3P0C7X3 344 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms