RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 PHF14O94880 888 aa9.41□□□□□ -0.9
FOXN3-215ENST00000557261 ABL2P42684 1182 aa9.41□□□□□ -0.9
FOXN3-215ENST00000557261 PXYLP1Q8TE99 480 aa9.41□□□□□ -0.9
FOXN3-215ENST00000557261 ADGRG1Q9Y653 693 aa9.41□□□□□ -0.9
FOXN3-215ENST00000557261 CTTNBP2Q8WZ74 1663 aa9.41□□□□□ -0.9
FOXN3-215ENST00000557261 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
FOXN3-215ENST00000557261 IGF1RP08069 1367 aa9.4□□□□□ -0.9
FOXN3-215ENST00000557261 PPP4R3BQ5MIZ7 849 aa9.4□□□□□ -0.9
FOXN3-215ENST00000557261 ADAMTS12P58397 1594 aa9.4□□□□□ -0.9
FOXN3-215ENST00000557261 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
FOXN3-215ENST00000557261 ARHGAP33O14559 1287 aa9.39□□□□□ -0.91
FOXN3-215ENST00000557261 GLMNQ92990 594 aa9.39□□□□□ -0.91
FOXN3-215ENST00000557261 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
FOXN3-215ENST00000557261 TBC1D2BQ9UPU7 963 aa9.39□□□□□ -0.91
FOXN3-215ENST00000557261 RBM25P49756 843 aaKnown RBP9.38□□□□□ -0.91
FOXN3-215ENST00000557261 CSPP1Q1MSJ5 1256 aa9.38□□□□□ -0.91
FOXN3-215ENST00000557261 FAM9AQ8IZU1 332 aaPredicted RBP9.38□□□□□ -0.91
FOXN3-215ENST00000557261 EPAS1Q99814 870 aa9.38□□□□□ -0.91
FOXN3-215ENST00000557261 GRIN2BQ13224 1484 aa9.37□□□□□ -0.91
FOXN3-215ENST00000557261 PPP2R2DQ66LE6 453 aa9.37□□□□□ -0.91
FOXN3-215ENST00000557261 RIC3Q7Z5B4 369 aa9.37□□□□□ -0.91
FOXN3-215ENST00000557261 CEP162Q5TB80 1403 aa9.37□□□□□ -0.91
FOXN3-215ENST00000557261 PSEN2P49810 448 aa9.36□□□□□ -0.91
FOXN3-215ENST00000557261 QPCTQ16769 361 aa9.36□□□□□ -0.91
FOXN3-215ENST00000557261 ADGRD1Q6QNK2 874 aa9.36□□□□□ -0.91
FOXN3-215ENST00000557261 ADAMTS19Q8TE59 1207 aa9.36□□□□□ -0.91
FOXN3-215ENST00000557261 SPIRE2Q8WWL2 714 aa9.36□□□□□ -0.91
FOXN3-215ENST00000557261 CARMIL1Q5VZK9 1371 aa9.36□□□□□ -0.91
FOXN3-215ENST00000557261 MAGI1Q96QZ7 1491 aaPredicted RBP9.35□□□□□ -0.91
FOXN3-215ENST00000557261 IGSF3O75054 1194 aa9.35□□□□□ -0.91
FOXN3-215ENST00000557261 OATP04181 439 aa9.35□□□□□ -0.91
FOXN3-215ENST00000557261 TMEM259Q4ZIN3 620 aa9.35□□□□□ -0.91
FOXN3-215ENST00000557261 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
FOXN3-215ENST00000557261 TYW1BQ6NUM6 668 aa9.34□□□□□ -0.91
FOXN3-215ENST00000557261 ZNF454Q8N9F8 522 aa9.34□□□□□ -0.91
FOXN3-215ENST00000557261 FHAD1B1AJZ9 1412 aa9.33□□□□□ -0.92
FOXN3-215ENST00000557261 EFCAB5A4FU69 1503 aa9.33□□□□□ -0.92
FOXN3-215ENST00000557261 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.33□□□□□ -0.92
FOXN3-215ENST00000557261 RFX1P22670 979 aa9.33□□□□□ -0.92
FOXN3-215ENST00000557261 RTL5Q5HYW3 569 aaPredicted RBP9.33□□□□□ -0.92
FOXN3-215ENST00000557261 FBXW7Q969H0 707 aa9.33□□□□□ -0.92
FOXN3-215ENST00000557261 KCNK17Q96T54 332 aa9.33□□□□□ -0.92
FOXN3-215ENST00000557261 PPP1R15AO75807 674 aaPredicted RBP9.32□□□□□ -0.92
FOXN3-215ENST00000557261 NDUFV2P19404 249 aa9.32□□□□□ -0.92
FOXN3-215ENST00000557261 PCDHB15Q9Y5E8 787 aa9.32□□□□□ -0.92
FOXN3-215ENST00000557261 ZNF608Q9ULD9 1512 aaPredicted RBP9.31□□□□□ -0.92
FOXN3-215ENST00000557261 MOXD2PA6NHM9 499 aa9.31□□□□□ -0.92
FOXN3-215ENST00000557261 AP1G2O75843 785 aa9.31□□□□□ -0.92
FOXN3-215ENST00000557261 TTC13Q8NBP0 860 aa9.31□□□□□ -0.92
FOXN3-215ENST00000557261 KCNH8Q96L42 1107 aa9.31□□□□□ -0.92
FOXN3-215ENST00000557261 TDRD9Q8NDG6 1382 aaKnown RBP9.3□□□□□ -0.92
FOXN3-215ENST00000557261 TK2O00142 265 aa9.3□□□□□ -0.92
FOXN3-215ENST00000557261 SPTLC1O15269 473 aa9.3□□□□□ -0.92
FOXN3-215ENST00000557261 RSBN1LQ6PCB5 846 aaPredicted RBP9.3□□□□□ -0.92
FOXN3-215ENST00000557261 CABLES1Q8TDN4 633 aa9.3□□□□□ -0.92
FOXN3-215ENST00000557261 FAM198AQ9UFP1 575 aa9.3□□□□□ -0.92
FOXN3-215ENST00000557261 CLIP1P30622 1438 aa9.3□□□□□ -0.92
FOXN3-215ENST00000557261 FOSBP53539 338 aa9.29□□□□□ -0.92
FOXN3-215ENST00000557261 C6orf132Q5T0Z8 1188 aa9.29□□□□□ -0.92
FOXN3-215ENST00000557261 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
FOXN3-215ENST00000557261 ACIN1Q9UKV3 1341 aaKnown RBP9.29□□□□□ -0.92
FOXN3-215ENST00000557261 SAMD9Q5K651 1589 aa9.29□□□□□ -0.92
FOXN3-215ENST00000557261 SYNJ2O15056 1496 aa9.28□□□□□ -0.92
FOXN3-215ENST00000557261 AQRO60306 1485 aaKnown RBP eCLIP9.28□□□□□ -0.92
FOXN3-215ENST00000557261 C3orf80F5H4A9 247 aa9.28□□□□□ -0.92
FOXN3-215ENST00000557261 SRPK2P78362 688 aaKnown RBP9.28□□□□□ -0.92
FOXN3-215ENST00000557261 CFAP70Q5T0N1 1121 aa9.28□□□□□ -0.92
FOXN3-215ENST00000557261 SNAPC4Q5SXM2 1469 aa9.28□□□□□ -0.92
FOXN3-215ENST00000557261 HRO43593 1189 aa9.27□□□□□ -0.93
FOXN3-215ENST00000557261 GPR37L1O60883 481 aa9.27□□□□□ -0.93
FOXN3-215ENST00000557261 PBXIP1Q96AQ6 731 aa9.27□□□□□ -0.93
FOXN3-215ENST00000557261 JPH4Q96JJ6 628 aa9.27□□□□□ -0.93
FOXN3-215ENST00000557261 BCL2L12Q9HB09 334 aa9.27□□□□□ -0.93
FOXN3-215ENST00000557261 RIMBP3CA6NJZ7 1639 aa9.27□□□□□ -0.93
FOXN3-215ENST00000557261 RIMBP3BA6NNM3 1639 aa9.27□□□□□ -0.93
FOXN3-215ENST00000557261 RIMBP3Q9UFD9 1639 aa9.27□□□□□ -0.93
FOXN3-215ENST00000557261 IQGAP2Q13576 1575 aa9.26□□□□□ -0.93
FOXN3-215ENST00000557261 VPS8Q8N3P4 1428 aa9.26□□□□□ -0.93
FOXN3-215ENST00000557261 LILRB3O75022 631 aa9.26□□□□□ -0.93
FOXN3-215ENST00000557261 USP17L8P0C7I0 530 aa9.26□□□□□ -0.93
FOXN3-215ENST00000557261 CD46P15529 392 aa9.26□□□□□ -0.93
FOXN3-215ENST00000557261 GJD4Q96KN9 370 aaPredicted RBP9.26□□□□□ -0.93
FOXN3-215ENST00000557261 GRIN2AQ12879 1464 aa9.26□□□□□ -0.93
FOXN3-215ENST00000557261 RCCD1A6NED2 376 aa9.25□□□□□ -0.93
FOXN3-215ENST00000557261 ARHGAP35Q9NRY4 1499 aa9.25□□□□□ -0.93
FOXN3-215ENST00000557261 ARAP1Q96P48 1450 aa9.24□□□□□ -0.93
FOXN3-215ENST00000557261 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
FOXN3-215ENST00000557261 HMX1Q9NP08 348 aaPredicted RBP9.24□□□□□ -0.93
FOXN3-215ENST00000557261 UGGT2Q9NYU1 1516 aa9.23□□□□□ -0.93
FOXN3-215ENST00000557261 PTPREP23469 700 aa9.23□□□□□ -0.93
FOXN3-215ENST00000557261 PRSS12P56730 875 aa9.23□□□□□ -0.93
FOXN3-215ENST00000557261 DIXDC1Q155Q3 683 aa9.23□□□□□ -0.93
FOXN3-215ENST00000557261 CDCA8Q53HL2 280 aa9.23□□□□□ -0.93
FOXN3-215ENST00000557261 WWC1Q8IX03 1113 aa9.23□□□□□ -0.93
FOXN3-215ENST00000557261 VPS9D1Q9Y2B5 631 aa9.23□□□□□ -0.93
FOXN3-215ENST00000557261 NUP160Q12769 1436 aa9.22□□□□□ -0.93
FOXN3-215ENST00000557261 ARHGEF11O15085 1522 aa9.22□□□□□ -0.93
FOXN3-215ENST00000557261 DDX11L8A8MPP1 907 aa9.22□□□□□ -0.93
FOXN3-215ENST00000557261 TUSC1Q2TAM9 212 aa9.22□□□□□ -0.93
FOXN3-215ENST00000557261 RBM46Q8TBY0 533 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms