RNA–Protein interactions for RNA: ENST00000557150.5

APEX1-215, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-215ENST00000557150 KNSTRNQ9Y448 316 aa16.64■□□□□ 0.25
APEX1-215ENST00000557150 CPS1P31327 1500 aa16.64■□□□□ 0.25
APEX1-215ENST00000557150 MYBBP1AQ9BQG0 1328 aaKnown RBP16.64■□□□□ 0.25
APEX1-215ENST00000557150 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
APEX1-215ENST00000557150 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
APEX1-215ENST00000557150 SETD1BQ9UPS6 1966 aaKnown RBP16.63■□□□□ 0.25
APEX1-215ENST00000557150 NINLQ9Y2I6 1382 aa16.62■□□□□ 0.25
APEX1-215ENST00000557150 CCDC184Q52MB2 194 aa16.61■□□□□ 0.25
APEX1-215ENST00000557150 TBX22Q9Y458 520 aa16.61■□□□□ 0.25
APEX1-215ENST00000557150 BRD4O60885 1362 aaPredicted RBP16.61■□□□□ 0.25
APEX1-215ENST00000557150 ATAD2Q6PL18 1390 aa16.6■□□□□ 0.25
APEX1-215ENST00000557150 SAFB2Q14151 953 aaKnown RBP eCLIP16.59■□□□□ 0.25
APEX1-215ENST00000557150 AMER1Q5JTC6 1135 aaPredicted RBP16.59■□□□□ 0.25
APEX1-215ENST00000557150 MINK1Q8N4C8 1332 aaPredicted RBP16.59■□□□□ 0.25
APEX1-215ENST00000557150 CNGB1Q14028 1251 aaPredicted RBP16.57■□□□□ 0.24
APEX1-215ENST00000557150 CC2D1BQ5T0F9 858 aaKnown RBP16.57■□□□□ 0.24
APEX1-215ENST00000557150 NLRP13Q86W25 1043 aa16.57■□□□□ 0.24
APEX1-215ENST00000557150 USP32Q8NFA0 1604 aa16.56■□□□□ 0.24
APEX1-215ENST00000557150 PLEKHH1Q9ULM0 1364 aa16.56■□□□□ 0.24
APEX1-215ENST00000557150 SRPK2P78362 688 aaKnown RBP16.56■□□□□ 0.24
APEX1-215ENST00000557150 WAPLQ7Z5K2 1190 aa16.56■□□□□ 0.24
APEX1-215ENST00000557150 TMC1Q8TDI8 760 aa16.56■□□□□ 0.24
APEX1-215ENST00000557150 CARD14Q9BXL6 1004 aa16.56■□□□□ 0.24
APEX1-215ENST00000557150 SLC12A5Q9H2X9 1139 aa16.56■□□□□ 0.24
APEX1-215ENST00000557150 CABP2Q9NPB3 220 aa16.56■□□□□ 0.24
APEX1-215ENST00000557150 ANKRD36BQ8N2N9 1353 aa16.55■□□□□ 0.24
APEX1-215ENST00000557150 PIK3R4Q99570 1358 aa16.55■□□□□ 0.24
APEX1-215ENST00000557150 ANKLE2Q86XL3 938 aa16.55■□□□□ 0.24
APEX1-215ENST00000557150 CDK19Q9BWU1 502 aa16.55■□□□□ 0.24
APEX1-215ENST00000557150 SLC26A8Q96RN1 970 aa16.54■□□□□ 0.24
APEX1-215ENST00000557150 PTPRUQ92729 1446 aa16.53■□□□□ 0.24
APEX1-215ENST00000557150 PTCH1Q13635 1447 aa16.53■□□□□ 0.24
APEX1-215ENST00000557150 NSD3Q9BZ95 1437 aa16.53■□□□□ 0.24
APEX1-215ENST00000557150 ROBO2Q9HCK4 1378 aa16.52■□□□□ 0.24
APEX1-215ENST00000557150 ADGRB2O60241 1585 aa16.52■□□□□ 0.24
APEX1-215ENST00000557150 FAM9BQ8IZU0 186 aa16.52■□□□□ 0.24
APEX1-215ENST00000557150 WASLO00401 505 aaPredicted RBP16.51■□□□□ 0.23
APEX1-215ENST00000557150 PNISRQ8TF01 805 aaKnown RBP16.51■□□□□ 0.23
APEX1-215ENST00000557150 XRN1Q8IZH2 1706 aaKnown RBP16.5■□□□□ 0.23
APEX1-215ENST00000557150 TERF2IPQ9NYB0 399 aa16.5■□□□□ 0.23
APEX1-215ENST00000557150 AMOTL2Q9Y2J4 779 aa16.5■□□□□ 0.23
APEX1-215ENST00000557150 NSD2O96028 1365 aa16.5■□□□□ 0.23
APEX1-215ENST00000557150 PPP2R1AP30153 589 aa16.49■□□□□ 0.23
APEX1-215ENST00000557150 HNRNPUQ00839 825 aaKnown RBP eCLIP16.48■□□□□ 0.23
APEX1-215ENST00000557150 ATP7BP35670 1465 aa16.48■□□□□ 0.23
APEX1-215ENST00000557150 CD163L1Q9NR16 1453 aa16.48■□□□□ 0.23
APEX1-215ENST00000557150 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.48■□□□□ 0.23
APEX1-215ENST00000557150 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
APEX1-215ENST00000557150 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
APEX1-215ENST00000557150 A0A1W2PP64 1363 aa16.47■□□□□ 0.23
APEX1-215ENST00000557150 INSRP06213 1382 aa16.47■□□□□ 0.23
APEX1-215ENST00000557150 LMTK3Q96Q04 1460 aa16.47■□□□□ 0.23
APEX1-215ENST00000557150 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
APEX1-215ENST00000557150 CABP1Q9NZU7 370 aa16.44■□□□□ 0.22
APEX1-215ENST00000557150 CHD2O14647 1828 aaKnown RBP16.44■□□□□ 0.22
APEX1-215ENST00000557150 NUDT16Q96DE0 195 aaKnown RBP16.43■□□□□ 0.22
APEX1-215ENST00000557150 CCDC61Q9Y6R9 512 aa16.43■□□□□ 0.22
APEX1-215ENST00000557150 MORC1Q86VD1 984 aa16.42■□□□□ 0.22
APEX1-215ENST00000557150 PPIP5K1Q6PFW1 1433 aa16.42■□□□□ 0.22
APEX1-215ENST00000557150 ZBED9Q6R2W3 1325 aa16.42■□□□□ 0.22
APEX1-215ENST00000557150 CPSF1Q10570 1443 aaKnown RBP16.41■□□□□ 0.22
APEX1-215ENST00000557150 CDC42BPGQ6DT37 1551 aa16.41■□□□□ 0.22
APEX1-215ENST00000557150 ANKRD26Q9UPS8 1709 aa16.41■□□□□ 0.22
APEX1-215ENST00000557150 SOCS7O14512 581 aa16.4■□□□□ 0.22
APEX1-215ENST00000557150 KCNA6P17658 529 aa16.4■□□□□ 0.22
APEX1-215ENST00000557150 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
APEX1-215ENST00000557150 PRR36Q9H6K5 1346 aa16.38■□□□□ 0.21
APEX1-215ENST00000557150 AKAP12Q02952 1782 aa16.38■□□□□ 0.21
APEX1-215ENST00000557150 KIF20BQ96Q89 1820 aa16.38■□□□□ 0.21
APEX1-215ENST00000557150 POLR3AO14802 1390 aaPredicted RBP16.38■□□□□ 0.21
APEX1-215ENST00000557150 EDC4Q6P2E9 1401 aaKnown RBP16.37■□□□□ 0.21
APEX1-215ENST00000557150 ITSN1Q15811 1721 aa16.37■□□□□ 0.21
APEX1-215ENST00000557150 MON2Q7Z3U7 1717 aa16.37■□□□□ 0.21
APEX1-215ENST00000557150 PLEKHG3A1L390 1219 aa16.37■□□□□ 0.21
APEX1-215ENST00000557150 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
APEX1-215ENST00000557150 NCKAP5LQ9HCH0 1330 aa16.37■□□□□ 0.21
APEX1-215ENST00000557150 NWD1Q149M9 1564 aa16.36■□□□□ 0.21
APEX1-215ENST00000557150 FYB1O15117 783 aa16.36■□□□□ 0.21
APEX1-215ENST00000557150 ILDR2Q71H61 639 aa16.36■□□□□ 0.21
APEX1-215ENST00000557150 BLMP54132 1417 aaPredicted RBP16.36■□□□□ 0.21
APEX1-215ENST00000557150 ANKARQ7Z5J8 1434 aa16.36■□□□□ 0.21
APEX1-215ENST00000557150 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.21
APEX1-215ENST00000557150 FMN2Q9NZ56 1722 aa16.33■□□□□ 0.21
APEX1-215ENST00000557150 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.2
APEX1-215ENST00000557150 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
APEX1-215ENST00000557150 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
APEX1-215ENST00000557150 CFAP53Q96M91 514 aa16.31■□□□□ 0.2
APEX1-215ENST00000557150 NALCNQ8IZF0 1738 aa16.31■□□□□ 0.2
APEX1-215ENST00000557150 ADGRL3Q9HAR2 1447 aa16.3■□□□□ 0.2
APEX1-215ENST00000557150 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
APEX1-215ENST00000557150 NRKQ7Z2Y5 1582 aa16.3■□□□□ 0.2
APEX1-215ENST00000557150 NKTRP30414 1462 aaKnown RBP16.29■□□□□ 0.2
APEX1-215ENST00000557150 ACEP12821 1306 aa16.29■□□□□ 0.2
APEX1-215ENST00000557150 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
APEX1-215ENST00000557150 MTHFSP49914 203 aa16.29■□□□□ 0.2
APEX1-215ENST00000557150 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.28■□□□□ 0.2
APEX1-215ENST00000557150 USP6P35125 1406 aa16.28■□□□□ 0.2
APEX1-215ENST00000557150 SHPRHQ149N8 1683 aa16.27■□□□□ 0.2
APEX1-215ENST00000557150 NUTM2FA1L443 756 aa16.26■□□□□ 0.19
APEX1-215ENST00000557150 SSH2Q76I76 1423 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms