RNA–Protein interactions for RNA: ENST00000556890.1

AL390334.1-204, humanhuman

TSL 1 (best)

Gene AL390334.1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-204ENST00000556890 PLEKHD1A6NEE1 506 aa10.93□□□□□ -0.66
AL390334.1-204ENST00000556890 PRSS12P56730 875 aa10.93□□□□□ -0.66
AL390334.1-204ENST00000556890 CDCA7LQ96GN5 454 aa10.93□□□□□ -0.66
AL390334.1-204ENST00000556890 CDK13Q14004 1512 aaKnown RBP10.93□□□□□ -0.66
AL390334.1-204ENST00000556890 FRMPD1Q5SYB0 1578 aa10.92□□□□□ -0.66
AL390334.1-204ENST00000556890 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.92□□□□□ -0.66
AL390334.1-204ENST00000556890 GRXCR2A6NFK2 248 aa10.91□□□□□ -0.66
AL390334.1-204ENST00000556890 KCNC4Q03721 635 aa10.91□□□□□ -0.66
AL390334.1-204ENST00000556890 HPS5Q9UPZ3 1129 aa10.91□□□□□ -0.66
AL390334.1-204ENST00000556890 FMN1Q68DA7 1419 aa10.91□□□□□ -0.66
AL390334.1-204ENST00000556890 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.66
AL390334.1-204ENST00000556890 ATP1B4Q9UN42 357 aaPredicted RBP10.9□□□□□ -0.66
AL390334.1-204ENST00000556890 BCORL1Q5H9F3 1711 aa10.89□□□□□ -0.67
AL390334.1-204ENST00000556890 FANCAO15360 1455 aa10.89□□□□□ -0.67
AL390334.1-204ENST00000556890 ARHGAP35Q9NRY4 1499 aa10.89□□□□□ -0.67
AL390334.1-204ENST00000556890 ADAMTSL3P82987 1691 aa10.89□□□□□ -0.67
AL390334.1-204ENST00000556890 KIF14Q15058 1648 aa10.88□□□□□ -0.67
AL390334.1-204ENST00000556890 RAPGEF3O95398 923 aa10.88□□□□□ -0.67
AL390334.1-204ENST00000556890 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
AL390334.1-204ENST00000556890 ARHGEF40Q8TER5 1519 aa10.88□□□□□ -0.67
AL390334.1-204ENST00000556890 NBPF26B4DH59 902 aa10.87□□□□□ -0.67
AL390334.1-204ENST00000556890 OSBPP22059 807 aa10.87□□□□□ -0.67
AL390334.1-204ENST00000556890 PRIM1P49642 420 aaKnown RBP10.87□□□□□ -0.67
AL390334.1-204ENST00000556890 PPP4CP60510 307 aa10.87□□□□□ -0.67
AL390334.1-204ENST00000556890 IRX2Q9BZI1 471 aaPredicted RBP10.87□□□□□ -0.67
AL390334.1-204ENST00000556890 MADDQ8WXG6 1647 aa10.87□□□□□ -0.67
AL390334.1-204ENST00000556890 DENND4BO75064 1496 aaPredicted RBP10.87□□□□□ -0.67
AL390334.1-204ENST00000556890 RIMS1Q86UR5 1692 aaKnown RBP10.86□□□□□ -0.67
AL390334.1-204ENST00000556890 AKNAQ7Z591 1439 aa10.86□□□□□ -0.67
AL390334.1-204ENST00000556890 TATDN2Q93075 761 aa10.86□□□□□ -0.67
AL390334.1-204ENST00000556890 FAM198AQ9UFP1 575 aa10.85□□□□□ -0.67
AL390334.1-204ENST00000556890 PCF11O94913 1555 aaKnown RBP10.85□□□□□ -0.67
AL390334.1-204ENST00000556890 FER1L4A9Z1Z3 1794 aa10.85□□□□□ -0.67
AL390334.1-204ENST00000556890 ARID4BQ4LE39 1312 aaPredicted RBP10.84□□□□□ -0.67
AL390334.1-204ENST00000556890 ZMYM4Q5VZL5 1548 aa10.84□□□□□ -0.67
AL390334.1-204ENST00000556890 CDC42BPBQ9Y5S2 1711 aa10.84□□□□□ -0.67
AL390334.1-204ENST00000556890 ZFYVE16Q7Z3T8 1539 aa10.84□□□□□ -0.67
AL390334.1-204ENST00000556890 SAMD7Q7Z3H4 446 aa10.83□□□□□ -0.68
AL390334.1-204ENST00000556890 PNMA3Q9UL41 463 aa10.83□□□□□ -0.68
AL390334.1-204ENST00000556890 CDK11AQ9UQ88 783 aaPredicted RBP10.83□□□□□ -0.68
AL390334.1-204ENST00000556890 SIGLEC1Q9BZZ2 1709 aa10.82□□□□□ -0.68
AL390334.1-204ENST00000556890 SMAPO00193 183 aa10.82□□□□□ -0.68
AL390334.1-204ENST00000556890 HDGFP51858 240 aaKnown RBP10.82□□□□□ -0.68
AL390334.1-204ENST00000556890 CLIP1P30622 1438 aa10.82□□□□□ -0.68
AL390334.1-204ENST00000556890 CDC42BPAQ5VT25 1732 aa10.81□□□□□ -0.68
AL390334.1-204ENST00000556890 PREX2Q70Z35 1606 aa10.81□□□□□ -0.68
AL390334.1-204ENST00000556890 ARHGAP5Q13017 1502 aa10.81□□□□□ -0.68
AL390334.1-204ENST00000556890 PLCH2O75038 1416 aa10.81□□□□□ -0.68
AL390334.1-204ENST00000556890 PTPRMP28827 1452 aa10.81□□□□□ -0.68
AL390334.1-204ENST00000556890 CCDC18Q5T9S5 1454 aa10.81□□□□□ -0.68
AL390334.1-204ENST00000556890 CDHR5Q9HBB8 845 aa10.8□□□□□ -0.68
AL390334.1-204ENST00000556890 TROQ12816 1431 aaPredicted RBP10.8□□□□□ -0.68
AL390334.1-204ENST00000556890 SCAPERQ9BY12 1400 aa10.79□□□□□ -0.68
AL390334.1-204ENST00000556890 MAGI2Q86UL8 1455 aa10.79□□□□□ -0.68
AL390334.1-204ENST00000556890 ITSN2Q9NZM3 1697 aa10.79□□□□□ -0.68
AL390334.1-204ENST00000556890 POGZQ7Z3K3 1410 aa10.78□□□□□ -0.68
AL390334.1-204ENST00000556890 C3orf80F5H4A9 247 aa10.78□□□□□ -0.68
AL390334.1-204ENST00000556890 NUDT18Q6ZVK8 323 aa10.78□□□□□ -0.68
AL390334.1-204ENST00000556890 TTC13Q8NBP0 860 aa10.78□□□□□ -0.68
AL390334.1-204ENST00000556890 NECTIN2Q92692 538 aa10.78□□□□□ -0.68
AL390334.1-204ENST00000556890 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
AL390334.1-204ENST00000556890 CASKIN1Q8WXD9 1431 aa10.77□□□□□ -0.68
AL390334.1-204ENST00000556890 YEATS2Q9ULM3 1422 aa10.77□□□□□ -0.68
AL390334.1-204ENST00000556890 FYCO1Q9BQS8 1478 aa10.77□□□□□ -0.69
AL390334.1-204ENST00000556890 EFCAB2Q5VUJ9 269 aa10.77□□□□□ -0.69
AL390334.1-204ENST00000556890 TJAP1Q5JTD0 557 aa10.76□□□□□ -0.69
AL390334.1-204ENST00000556890 NPDC1Q9NQX5 325 aaPredicted RBP10.76□□□□□ -0.69
AL390334.1-204ENST00000556890 ZNF518AQ6AHZ1 1483 aa10.75□□□□□ -0.69
AL390334.1-204ENST00000556890 KDM5CP41229 1560 aa10.74□□□□□ -0.69
AL390334.1-204ENST00000556890 IL21Q9HBE4 155 aa10.74□□□□□ -0.69
AL390334.1-204ENST00000556890 C9orf84Q5VXU9 1444 aa10.74□□□□□ -0.69
AL390334.1-204ENST00000556890 PADI6Q6TGC4 694 aa10.73□□□□□ -0.69
AL390334.1-204ENST00000556890 ATP10AO60312 1499 aa10.73□□□□□ -0.69
AL390334.1-204ENST00000556890 ABCC1P33527 1531 aa10.73□□□□□ -0.69
AL390334.1-204ENST00000556890 ABCA6Q8N139 1617 aa10.73□□□□□ -0.69
AL390334.1-204ENST00000556890 PREX1Q8TCU6 1659 aa10.73□□□□□ -0.69
AL390334.1-204ENST00000556890 MLECQ14165 292 aa10.72□□□□□ -0.69
AL390334.1-204ENST00000556890 TSHZ2Q9NRE2 1034 aa10.72□□□□□ -0.69
AL390334.1-204ENST00000556890 DIP2CQ9Y2E4 1556 aa10.72□□□□□ -0.69
AL390334.1-204ENST00000556890 SETD1BQ9UPS6 1966 aaKnown RBP10.72□□□□□ -0.69
AL390334.1-204ENST00000556890 SLF2Q8IX21 1173 aa10.71□□□□□ -0.69
AL390334.1-204ENST00000556890 MTRQ99707 1265 aa10.71□□□□□ -0.69
AL390334.1-204ENST00000556890 KIDINS220Q9ULH0 1771 aa10.71□□□□□ -0.69
AL390334.1-204ENST00000556890 RNF40O75150 1001 aa10.7□□□□□ -0.7
AL390334.1-204ENST00000556890 SLC4A3P48751 1232 aa10.7□□□□□ -0.7
AL390334.1-204ENST00000556890 ARHGEF12Q9NZN5 1544 aa10.69□□□□□ -0.7
AL390334.1-204ENST00000556890 LMTK3Q96Q04 1460 aa10.69□□□□□ -0.7
AL390334.1-204ENST00000556890 SUPT6HQ7KZ85 1726 aaKnown RBP10.69□□□□□ -0.7
AL390334.1-204ENST00000556890 SAMD9LQ8IVG5 1584 aa10.69□□□□□ -0.7
AL390334.1-204ENST00000556890 REREQ9P2R6 1566 aa10.69□□□□□ -0.7
AL390334.1-204ENST00000556890 LAPTM4AQ15012 233 aa10.68□□□□□ -0.7
AL390334.1-204ENST00000556890 SWT1Q5T5J6 900 aaKnown RBP10.68□□□□□ -0.7
AL390334.1-204ENST00000556890 AFAP1Q8N556 730 aa10.68□□□□□ -0.7
AL390334.1-204ENST00000556890 KCNV2Q8TDN2 545 aa10.68□□□□□ -0.7
AL390334.1-204ENST00000556890 EYA1Q99502 592 aa10.68□□□□□ -0.7
AL390334.1-204ENST00000556890 C3P01024 1663 aa10.68□□□□□ -0.7
AL390334.1-204ENST00000556890 MLLT3P42568 568 aaPredicted RBP10.67□□□□□ -0.7
AL390334.1-204ENST00000556890 APLP1P51693 650 aa10.67□□□□□ -0.7
AL390334.1-204ENST00000556890 SYCP2Q9BX26 1530 aa10.67□□□□□ -0.7
AL390334.1-204ENST00000556890 ZNF777Q9ULD5 760 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms