RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 RUSC2Q8N2Y8 1516 aa9.31□□□□□ -0.92
PRPF39-211ENST00000556782 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
PRPF39-211ENST00000556782 EMID1Q96A84 441 aaPredicted RBP9.31□□□□□ -0.92
PRPF39-211ENST00000556782 CUL7Q14999 1698 aa9.31□□□□□ -0.92
PRPF39-211ENST00000556782 IGF1RP08069 1367 aa9.3□□□□□ -0.92
PRPF39-211ENST00000556782 POTECB2RU33 542 aa9.28□□□□□ -0.92
PRPF39-211ENST00000556782 ZNF697Q5TEC3 545 aa9.28□□□□□ -0.92
PRPF39-211ENST00000556782 FAM187AA6NFU0 413 aa9.27□□□□□ -0.93
PRPF39-211ENST00000556782 TLL1O43897 1013 aa9.27□□□□□ -0.93
PRPF39-211ENST00000556782 PRG4Q92954 1404 aaPredicted RBP9.27□□□□□ -0.93
PRPF39-211ENST00000556782 PPEF1O14829 653 aaPredicted RBP9.26□□□□□ -0.93
PRPF39-211ENST00000556782 LIAT1Q6ZQX7 453 aa9.26□□□□□ -0.93
PRPF39-211ENST00000556782 S1PR4O95977 384 aa9.25□□□□□ -0.93
PRPF39-211ENST00000556782 DNAJB2P25686 324 aa9.25□□□□□ -0.93
PRPF39-211ENST00000556782 KMT5BQ4FZB7 885 aa9.25□□□□□ -0.93
PRPF39-211ENST00000556782 KIAA0586Q9BVV6 1533 aa9.25□□□□□ -0.93
PRPF39-211ENST00000556782 TNFRSF10AO00220 468 aa9.24□□□□□ -0.93
PRPF39-211ENST00000556782 GDF9O60383 454 aa9.24□□□□□ -0.93
PRPF39-211ENST00000556782 CARMIL1Q5VZK9 1371 aa9.24□□□□□ -0.93
PRPF39-211ENST00000556782 ACTN4O43707 911 aaKnown RBP9.23□□□□□ -0.93
PRPF39-211ENST00000556782 RBM46Q8TBY0 533 aaKnown RBP9.23□□□□□ -0.93
PRPF39-211ENST00000556782 TSHZ2Q9NRE2 1034 aa9.22□□□□□ -0.93
PRPF39-211ENST00000556782 ADH1BP00325 375 aa9.21□□□□□ -0.94
PRPF39-211ENST00000556782 TREML4Q6UXN2 200 aa9.21□□□□□ -0.94
PRPF39-211ENST00000556782 TMEM134Q9H6X4 195 aa9.21□□□□□ -0.94
PRPF39-211ENST00000556782 NR1I2O75469 434 aa9.2□□□□□ -0.94
PRPF39-211ENST00000556782 ST8SIA5O15466 376 aa9.19□□□□□ -0.94
PRPF39-211ENST00000556782 CFHP08603 1231 aa9.19□□□□□ -0.94
PRPF39-211ENST00000556782 AAASQ9NRG9 546 aa9.19□□□□□ -0.94
PRPF39-211ENST00000556782 IQGAP2Q13576 1575 aa9.19□□□□□ -0.94
PRPF39-211ENST00000556782 SLC6A16Q9GZN6 736 aa9.18□□□□□ -0.94
PRPF39-211ENST00000556782 RAPGEF2Q9Y4G8 1499 aa9.18□□□□□ -0.94
PRPF39-211ENST00000556782 RCCD1A6NED2 376 aa9.17□□□□□ -0.94
PRPF39-211ENST00000556782 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
PRPF39-211ENST00000556782 ADGRG1Q9Y653 693 aa9.17□□□□□ -0.94
PRPF39-211ENST00000556782 ADCY10Q96PN6 1610 aa9.16□□□□□ -0.94
PRPF39-211ENST00000556782 PTGDRQ13258 359 aa9.16□□□□□ -0.94
PRPF39-211ENST00000556782 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
PRPF39-211ENST00000556782 LMOD2Q6P5Q4 547 aa9.16□□□□□ -0.94
PRPF39-211ENST00000556782 CARMIL2Q6F5E8 1435 aa9.14□□□□□ -0.95
PRPF39-211ENST00000556782 FOXC1Q12948 553 aa9.14□□□□□ -0.95
PRPF39-211ENST00000556782 PLA2G2CQ5R387 149 aa9.14□□□□□ -0.95
PRPF39-211ENST00000556782 MAPKBP1O60336 1514 aa9.14□□□□□ -0.95
PRPF39-211ENST00000556782 TNIKQ9UKE5 1360 aa9.13□□□□□ -0.95
PRPF39-211ENST00000556782 SLC10A3P09131 477 aa9.13□□□□□ -0.95
PRPF39-211ENST00000556782 SCUBE3Q8IX30 993 aa9.13□□□□□ -0.95
PRPF39-211ENST00000556782 PKD2L1Q9P0L9 805 aa9.13□□□□□ -0.95
PRPF39-211ENST00000556782 DISP1Q96F81 1524 aa9.13□□□□□ -0.95
PRPF39-211ENST00000556782 UGGT2Q9NYU1 1516 aa9.13□□□□□ -0.95
PRPF39-211ENST00000556782 PTPRGP23470 1445 aa9.13□□□□□ -0.95
PRPF39-211ENST00000556782 MLLT3P42568 568 aaPredicted RBP9.12□□□□□ -0.95
PRPF39-211ENST00000556782 CRIPAKQ8N1N5 446 aa9.12□□□□□ -0.95
PRPF39-211ENST00000556782 KCNV2Q8TDN2 545 aa9.12□□□□□ -0.95
PRPF39-211ENST00000556782 PRXQ9BXM0 1461 aa9.12□□□□□ -0.95
PRPF39-211ENST00000556782 KIF13AQ9H1H9 1805 aa9.12□□□□□ -0.95
PRPF39-211ENST00000556782 CTTNBP2Q8WZ74 1663 aa9.11□□□□□ -0.95
PRPF39-211ENST00000556782 ABCC10Q5T3U5 1492 aa9.11□□□□□ -0.95
PRPF39-211ENST00000556782 FAM161AQ3B820 660 aa9.11□□□□□ -0.95
PRPF39-211ENST00000556782 DIP2BQ9P265 1576 aa9.11□□□□□ -0.95
PRPF39-211ENST00000556782 KIAA0556O60303 1618 aa9.1□□□□□ -0.95
PRPF39-211ENST00000556782 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.1□□□□□ -0.95
PRPF39-211ENST00000556782 WFS1O76024 890 aa9.1□□□□□ -0.95
PRPF39-211ENST00000556782 RSPH4AQ5TD94 716 aa9.1□□□□□ -0.95
PRPF39-211ENST00000556782 SPSB2Q99619 263 aa9.1□□□□□ -0.95
PRPF39-211ENST00000556782 RPIAP49247 311 aa9.09□□□□□ -0.95
PRPF39-211ENST00000556782 PLCB2Q00722 1185 aa9.09□□□□□ -0.95
PRPF39-211ENST00000556782 ABCC2Q92887 1545 aa9.09□□□□□ -0.95
PRPF39-211ENST00000556782 UHRF1BP1LA0JNW5 1464 aa9.08□□□□□ -0.96
PRPF39-211ENST00000556782 TTBK1Q5TCY1 1321 aaPredicted RBP9.08□□□□□ -0.96
PRPF39-211ENST00000556782 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
PRPF39-211ENST00000556782 C11orf95C9JLR9 678 aaPredicted RBP9.08□□□□□ -0.96
PRPF39-211ENST00000556782 AXIN1O15169 862 aa9.08□□□□□ -0.96
PRPF39-211ENST00000556782 CD2BP2O95400 341 aaKnown RBP9.08□□□□□ -0.96
PRPF39-211ENST00000556782 AVPP01185 164 aa9.08□□□□□ -0.96
PRPF39-211ENST00000556782 DACH1Q9UI36 760 aa9.08□□□□□ -0.96
PRPF39-211ENST00000556782 UACAQ9BZF9 1416 aa9.07□□□□□ -0.96
PRPF39-211ENST00000556782 PUS10Q3MIT2 529 aaKnown RBP9.07□□□□□ -0.96
PRPF39-211ENST00000556782 P3H3Q8IVL6 736 aa9.07□□□□□ -0.96
PRPF39-211ENST00000556782 CYP4X1Q8N118 509 aa9.07□□□□□ -0.96
PRPF39-211ENST00000556782 FAM69CQ0P6D2 419 aa9.06□□□□□ -0.96
PRPF39-211ENST00000556782 CTC1Q2NKJ3 1217 aa9.06□□□□□ -0.96
PRPF39-211ENST00000556782 TOR4AQ9NXH8 423 aa9.06□□□□□ -0.96
PRPF39-211ENST00000556782 GMPR2Q9P2T1 348 aaKnown RBP9.06□□□□□ -0.96
PRPF39-211ENST00000556782 GOLGA3Q08378 1498 aa9.06□□□□□ -0.96
PRPF39-211ENST00000556782 EEA1Q15075 1411 aa9.05□□□□□ -0.96
PRPF39-211ENST00000556782 OATP04181 439 aa9.05□□□□□ -0.96
PRPF39-211ENST00000556782 FCHSD2O94868 740 aa9.04□□□□□ -0.96
PRPF39-211ENST00000556782 STK17AQ9UEE5 414 aa9.04□□□□□ -0.96
PRPF39-211ENST00000556782 KDM5BQ9UGL1 1544 aa9.04□□□□□ -0.96
PRPF39-211ENST00000556782 ASXL2Q76L83 1435 aa9.04□□□□□ -0.96
PRPF39-211ENST00000556782 PLB1Q6P1J6 1458 aa9.03□□□□□ -0.96
PRPF39-211ENST00000556782 SMCPP49901 116 aaPredicted RBP9.03□□□□□ -0.96
PRPF39-211ENST00000556782 PXYLP1Q8TE99 480 aa9.03□□□□□ -0.96
PRPF39-211ENST00000556782 FCF1Q9Y324 198 aaKnown RBP9.03□□□□□ -0.96
PRPF39-211ENST00000556782 ZCCHC11Q5TAX3 1644 aaKnown RBP9.02□□□□□ -0.96
PRPF39-211ENST00000556782 INSM1Q01101 510 aaPredicted RBP9.02□□□□□ -0.97
PRPF39-211ENST00000556782 ABCA8O94911 1581 aa9.01□□□□□ -0.97
PRPF39-211ENST00000556782 GLI2P10070 1586 aa9.01□□□□□ -0.97
PRPF39-211ENST00000556782 NFX1Q12986 1120 aaKnown RBP9.01□□□□□ -0.97
PRPF39-211ENST00000556782 TTC24A2A3L6 582 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms