RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 SRPK2P78362 688 aaKnown RBP18.89■□□□□ 0.61
EFCAB11-212ENST00000556639 MRS2Q9HD23 443 aa18.88■□□□□ 0.61
EFCAB11-212ENST00000556639 ROBO2Q9HCK4 1378 aa18.88■□□□□ 0.61
EFCAB11-212ENST00000556639 CDK19Q9BWU1 502 aa18.87■□□□□ 0.61
EFCAB11-212ENST00000556639 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
EFCAB11-212ENST00000556639 TBX22Q9Y458 520 aa18.86■□□□□ 0.61
EFCAB11-212ENST00000556639 KDM4FA0A1W2PPD8 638 aa18.86■□□□□ 0.61
EFCAB11-212ENST00000556639 ANKLE2Q86XL3 938 aa18.86■□□□□ 0.61
EFCAB11-212ENST00000556639 KTN1Q86UP2 1357 aaKnown RBP18.86■□□□□ 0.61
EFCAB11-212ENST00000556639 AMER1Q5JTC6 1135 aaPredicted RBP18.85■□□□□ 0.61
EFCAB11-212ENST00000556639 TECPR2O15040 1411 aa18.85■□□□□ 0.61
EFCAB11-212ENST00000556639 AMOTL2Q9Y2J4 779 aa18.85■□□□□ 0.61
EFCAB11-212ENST00000556639 PARD3Q8TEW0 1356 aa18.85■□□□□ 0.61
EFCAB11-212ENST00000556639 KNDC1Q76NI1 1749 aa18.84■□□□□ 0.61
EFCAB11-212ENST00000556639 CPS1P31327 1500 aa18.83■□□□□ 0.61
EFCAB11-212ENST00000556639 RALBP1Q15311 655 aa18.83■□□□□ 0.61
EFCAB11-212ENST00000556639 FAM9BQ8IZU0 186 aa18.82■□□□□ 0.6
EFCAB11-212ENST00000556639 FAM135BQ49AJ0 1406 aa18.82■□□□□ 0.6
EFCAB11-212ENST00000556639 PUS7Q96PZ0 661 aaKnown RBP18.82■□□□□ 0.6
EFCAB11-212ENST00000556639 MYBBP1AQ9BQG0 1328 aaKnown RBP18.81■□□□□ 0.6
EFCAB11-212ENST00000556639 NCKAP5LQ9HCH0 1330 aa18.81■□□□□ 0.6
EFCAB11-212ENST00000556639 SIRT1Q96EB6 747 aa18.81■□□□□ 0.6
EFCAB11-212ENST00000556639 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
EFCAB11-212ENST00000556639 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.8■□□□□ 0.6
EFCAB11-212ENST00000556639 WASLO00401 505 aaPredicted RBP18.79■□□□□ 0.6
EFCAB11-212ENST00000556639 NSD3Q9BZ95 1437 aa18.79■□□□□ 0.6
EFCAB11-212ENST00000556639 KCNA6P17658 529 aa18.78■□□□□ 0.6
EFCAB11-212ENST00000556639 CABP1Q9NZU7 370 aa18.78■□□□□ 0.6
EFCAB11-212ENST00000556639 DIP2AQ14689 1571 aa18.77■□□□□ 0.6
EFCAB11-212ENST00000556639 ATAD2Q6PL18 1390 aa18.76■□□□□ 0.59
EFCAB11-212ENST00000556639 HSPA2P54652 639 aa18.76■□□□□ 0.59
EFCAB11-212ENST00000556639 NUTM2FA1L443 756 aa18.75■□□□□ 0.59
EFCAB11-212ENST00000556639 A0A1W2PP64 1363 aa18.75■□□□□ 0.59
EFCAB11-212ENST00000556639 ANKRD36BQ8N2N9 1353 aa18.75■□□□□ 0.59
EFCAB11-212ENST00000556639 RBM33Q96EV2 1170 aaKnown RBP18.75■□□□□ 0.59
EFCAB11-212ENST00000556639 CD163L1Q9NR16 1453 aa18.75■□□□□ 0.59
EFCAB11-212ENST00000556639 NPHP4O75161 1426 aaPredicted RBP18.74■□□□□ 0.59
EFCAB11-212ENST00000556639 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
EFCAB11-212ENST00000556639 PRR36Q9H6K5 1346 aa18.73■□□□□ 0.59
EFCAB11-212ENST00000556639 NLRP13Q86W25 1043 aa18.73■□□□□ 0.59
EFCAB11-212ENST00000556639 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
EFCAB11-212ENST00000556639 PNISRQ8TF01 805 aaKnown RBP18.73■□□□□ 0.59
EFCAB11-212ENST00000556639 NUDT16Q96DE0 195 aaKnown RBP18.73■□□□□ 0.59
EFCAB11-212ENST00000556639 BRD4O60885 1362 aaPredicted RBP18.72■□□□□ 0.59
EFCAB11-212ENST00000556639 NPC1L1Q9UHC9 1359 aa18.72■□□□□ 0.59
EFCAB11-212ENST00000556639 SENP3-EIF4A1A0A087X0R7 540 aa18.72■□□□□ 0.59
EFCAB11-212ENST00000556639 PTCH1Q13635 1447 aa18.71■□□□□ 0.59
EFCAB11-212ENST00000556639 HNRNPUQ00839 825 aaKnown RBP eCLIP18.71■□□□□ 0.59
EFCAB11-212ENST00000556639 CHD2O14647 1828 aaKnown RBP18.7■□□□□ 0.58
EFCAB11-212ENST00000556639 TNNT2P45379 298 aaPredicted RBP18.69■□□□□ 0.58
EFCAB11-212ENST00000556639 PIK3R4Q99570 1358 aa18.69■□□□□ 0.58
EFCAB11-212ENST00000556639 NINLQ9Y2I6 1382 aa18.69■□□□□ 0.58
EFCAB11-212ENST00000556639 PPIP5K1Q6PFW1 1433 aa18.69■□□□□ 0.58
EFCAB11-212ENST00000556639 TERF2IPQ9NYB0 399 aa18.68■□□□□ 0.58
EFCAB11-212ENST00000556639 ATP7BP35670 1465 aa18.68■□□□□ 0.58
EFCAB11-212ENST00000556639 ADGRB2O60241 1585 aa18.67■□□□□ 0.58
EFCAB11-212ENST00000556639 CGNL1Q0VF96 1302 aa18.67■□□□□ 0.58
EFCAB11-212ENST00000556639 CCDC61Q9Y6R9 512 aa18.67■□□□□ 0.58
EFCAB11-212ENST00000556639 HDGFL2Q7Z4V5 671 aaPredicted RBP18.66■□□□□ 0.58
EFCAB11-212ENST00000556639 GGNBP2Q9H3C7 697 aa18.66■□□□□ 0.58
EFCAB11-212ENST00000556639 MORC1Q86VD1 984 aa18.66■□□□□ 0.58
EFCAB11-212ENST00000556639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.65■□□□□ 0.58
EFCAB11-212ENST00000556639 USP32Q8NFA0 1604 aa18.64■□□□□ 0.58
EFCAB11-212ENST00000556639 FYB1O15117 783 aa18.64■□□□□ 0.57
EFCAB11-212ENST00000556639 LMTK3Q96Q04 1460 aa18.62■□□□□ 0.57
EFCAB11-212ENST00000556639 CPSF1Q10570 1443 aaKnown RBP18.62■□□□□ 0.57
EFCAB11-212ENST00000556639 RGPD8O14715 1765 aaPredicted RBP18.62■□□□□ 0.57
EFCAB11-212ENST00000556639 PMFBP1Q8TBY8 1022 aa18.61■□□□□ 0.57
EFCAB11-212ENST00000556639 NALCNQ8IZF0 1738 aa18.6■□□□□ 0.57
EFCAB11-212ENST00000556639 CDC42BPGQ6DT37 1551 aa18.6■□□□□ 0.57
EFCAB11-212ENST00000556639 NKTRP30414 1462 aaKnown RBP18.6■□□□□ 0.57
EFCAB11-212ENST00000556639 ZRANB1Q9UGI0 708 aa18.6■□□□□ 0.57
EFCAB11-212ENST00000556639 ACEP12821 1306 aa18.59■□□□□ 0.57
EFCAB11-212ENST00000556639 TOPAZ1Q8N9V7 1692 aa18.58■□□□□ 0.57
EFCAB11-212ENST00000556639 FBLN1P23142 703 aa18.58■□□□□ 0.56
EFCAB11-212ENST00000556639 NME9Q86XW9 330 aa18.57■□□□□ 0.56
EFCAB11-212ENST00000556639 PLEKHG3A1L390 1219 aa18.56■□□□□ 0.56
EFCAB11-212ENST00000556639 ADAMTS8Q9UP79 889 aa18.56■□□□□ 0.56
EFCAB11-212ENST00000556639 NSD2O96028 1365 aa18.56■□□□□ 0.56
EFCAB11-212ENST00000556639 MTHFSP49914 203 aa18.56■□□□□ 0.56
EFCAB11-212ENST00000556639 AKAP12Q02952 1782 aa18.56■□□□□ 0.56
EFCAB11-212ENST00000556639 PROSER2Q86WR7 435 aaPredicted RBP18.55■□□□□ 0.56
EFCAB11-212ENST00000556639 ITSN1Q15811 1721 aa18.55■□□□□ 0.56
EFCAB11-212ENST00000556639 MON2Q7Z3U7 1717 aa18.55■□□□□ 0.56
EFCAB11-212ENST00000556639 KIF20BQ96Q89 1820 aa18.55■□□□□ 0.56
EFCAB11-212ENST00000556639 C14orf37Q86TY3 774 aa18.55■□□□□ 0.56
EFCAB11-212ENST00000556639 STRCP1A6NGW2 1772 aa18.55■□□□□ 0.56
EFCAB11-212ENST00000556639 STRCQ7RTU9 1775 aa18.55■□□□□ 0.56
EFCAB11-212ENST00000556639 NWD1Q149M9 1564 aa18.54■□□□□ 0.56
EFCAB11-212ENST00000556639 EDC4Q6P2E9 1401 aaKnown RBP18.54■□□□□ 0.56
EFCAB11-212ENST00000556639 FMN2Q9NZ56 1722 aa18.54■□□□□ 0.56
EFCAB11-212ENST00000556639 SALL2Q9Y467 1007 aaPredicted RBP18.53■□□□□ 0.56
EFCAB11-212ENST00000556639 ZNF692Q9BU19 519 aaPredicted RBP18.52■□□□□ 0.56
EFCAB11-212ENST00000556639 ANKRD26Q9UPS8 1709 aa18.52■□□□□ 0.56
EFCAB11-212ENST00000556639 ADGRL3Q9HAR2 1447 aa18.52■□□□□ 0.56
EFCAB11-212ENST00000556639 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
EFCAB11-212ENST00000556639 NGDNQ8NEJ9 315 aaKnown RBP18.51■□□□□ 0.55
EFCAB11-212ENST00000556639 ZBED9Q6R2W3 1325 aa18.51■□□□□ 0.55
EFCAB11-212ENST00000556639 TTC21BQ7Z4L5 1316 aa18.51■□□□□ 0.55
EFCAB11-212ENST00000556639 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms