RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 CARMIL2Q6F5E8 1435 aa10.96□□□□□ -0.65
MARK3-210ENST00000556463 TSPY4P0CV99 314 aa10.96□□□□□ -0.65
MARK3-210ENST00000556463 TSPY10P0CW01 314 aa10.96□□□□□ -0.65
MARK3-210ENST00000556463 POGKQ9P215 609 aa10.96□□□□□ -0.66
MARK3-210ENST00000556463 CEP152O94986 1710 aa10.96□□□□□ -0.66
MARK3-210ENST00000556463 PDE3AQ14432 1141 aa10.95□□□□□ -0.66
MARK3-210ENST00000556463 NGEFQ8N5V2 710 aa10.95□□□□□ -0.66
MARK3-210ENST00000556463 SEC24BO95487 1268 aa10.95□□□□□ -0.66
MARK3-210ENST00000556463 CANXP27824 592 aaKnown RBP10.95□□□□□ -0.66
MARK3-210ENST00000556463 SHPRHQ149N8 1683 aa10.95□□□□□ -0.66
MARK3-210ENST00000556463 SHROOM2Q13796 1616 aa10.94□□□□□ -0.66
MARK3-210ENST00000556463 MAPK8IP3Q9UPT6 1336 aa10.94□□□□□ -0.66
MARK3-210ENST00000556463 TTC37Q6PGP7 1564 aa10.94□□□□□ -0.66
MARK3-210ENST00000556463 RTEL1-TNFRSF6BF6WH68 1400 aa10.94□□□□□ -0.66
MARK3-210ENST00000556463 NAP1L2Q9ULW6 460 aaPredicted RBP10.93□□□□□ -0.66
MARK3-210ENST00000556463 SYCP2Q9BX26 1530 aa10.93□□□□□ -0.66
MARK3-210ENST00000556463 VGLL3A8MV65 326 aa10.93□□□□□ -0.66
MARK3-210ENST00000556463 CDK11BP21127 795 aaKnown RBP10.93□□□□□ -0.66
MARK3-210ENST00000556463 PLEKHD1A6NEE1 506 aa10.93□□□□□ -0.66
MARK3-210ENST00000556463 SCAF11Q99590 1463 aaKnown RBP10.93□□□□□ -0.66
MARK3-210ENST00000556463 KDM5AP29375 1690 aaKnown RBP10.92□□□□□ -0.66
MARK3-210ENST00000556463 CHGAP10645 457 aaKnown RBP10.92□□□□□ -0.66
MARK3-210ENST00000556463 HNRNPMP52272 730 aaKnown RBP eCLIP10.92□□□□□ -0.662e-7■■■■■ 29.2
MARK3-210ENST00000556463 CGNL1Q0VF96 1302 aa10.92□□□□□ -0.66
MARK3-210ENST00000556463 TRPM2O94759 1503 aa10.92□□□□□ -0.66
MARK3-210ENST00000556463 IQSEC2Q5JU85 1478 aa10.92□□□□□ -0.66
MARK3-210ENST00000556463 E9PSI1 815 aa10.91□□□□□ -0.66
MARK3-210ENST00000556463 PTPRTO14522 1441 aa10.91□□□□□ -0.66
MARK3-210ENST00000556463 MYO3AQ8NEV4 1616 aa10.91□□□□□ -0.66
MARK3-210ENST00000556463 TBC1D32Q96NH3 1257 aa10.91□□□□□ -0.66
MARK3-210ENST00000556463 BCAR3O75815 825 aa10.91□□□□□ -0.66
MARK3-210ENST00000556463 L1TD1Q5T7N2 865 aaKnown RBP10.91□□□□□ -0.66
MARK3-210ENST00000556463 HOXD11P31277 338 aaPredicted RBP10.9□□□□□ -0.66
MARK3-210ENST00000556463 TNNT2P45379 298 aaPredicted RBP10.9□□□□□ -0.66
MARK3-210ENST00000556463 ANP32BQ92688 251 aaKnown RBP10.9□□□□□ -0.66
MARK3-210ENST00000556463 KANK1Q14678 1352 aa10.9□□□□□ -0.67
MARK3-210ENST00000556463 DEPDC5O75140 1603 aa10.9□□□□□ -0.67
MARK3-210ENST00000556463 STAC3Q96MF2 364 aa10.9□□□□□ -0.67
MARK3-210ENST00000556463 DMRT2Q9Y5R5 561 aa10.9□□□□□ -0.67
MARK3-210ENST00000556463 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.9□□□□□ -0.67
MARK3-210ENST00000556463 WDR43Q15061 677 aaKnown RBP eCLIP10.89□□□□□ -0.67
MARK3-210ENST00000556463 CLUAP1Q96AJ1 413 aa10.89□□□□□ -0.67
MARK3-210ENST00000556463 JPH4Q96JJ6 628 aa10.89□□□□□ -0.67
MARK3-210ENST00000556463 GOLGA6L3A6NEY3 463 aa10.88□□□□□ -0.67
MARK3-210ENST00000556463 KNSTRNQ9Y448 316 aa10.88□□□□□ -0.67
MARK3-210ENST00000556463 POLR3AO14802 1390 aaPredicted RBP10.88□□□□□ -0.67
MARK3-210ENST00000556463 NCOA3Q9Y6Q9 1424 aa10.88□□□□□ -0.67
MARK3-210ENST00000556463 XRCC6P12956 609 aaKnown RBP eCLIP10.88□□□□□ -0.67
MARK3-210ENST00000556463 CLCN1P35523 988 aa10.88□□□□□ -0.67
MARK3-210ENST00000556463 BECN1Q14457 450 aa10.88□□□□□ -0.67
MARK3-210ENST00000556463 DHX37Q8IY37 1157 aaKnown RBP10.88□□□□□ -0.67
MARK3-210ENST00000556463 CLTCL1P53675 1640 aa10.87□□□□□ -0.67
MARK3-210ENST00000556463 TBC1D2Q9BYX2 928 aa10.87□□□□□ -0.67
MARK3-210ENST00000556463 PANK2Q9BZ23 570 aa10.87□□□□□ -0.67
MARK3-210ENST00000556463 VWDEQ8N2E2 1590 aa10.87□□□□□ -0.67
MARK3-210ENST00000556463 ERVK-7P63135 1459 aa10.87□□□□□ -0.67
MARK3-210ENST00000556463 DDIT3P35638 169 aa10.87□□□□□ -0.67
MARK3-210ENST00000556463 RGL3Q3MIN7 710 aa10.87□□□□□ -0.67
MARK3-210ENST00000556463 IFT172Q9UG01 1749 aa10.87□□□□□ -0.67
MARK3-210ENST00000556463 USP32Q8NFA0 1604 aa10.87□□□□□ -0.67
MARK3-210ENST00000556463 CDCA8Q53HL2 280 aa10.86□□□□□ -0.67
MARK3-210ENST00000556463 ERCC6Q03468 1493 aa10.86□□□□□ -0.67
MARK3-210ENST00000556463 MKRN4PQ13434 485 aaPredicted RBP10.86□□□□□ -0.67
MARK3-210ENST00000556463 APAF1O14727 1248 aa10.85□□□□□ -0.67
MARK3-210ENST00000556463 ZNF692Q9BU19 519 aaPredicted RBP10.85□□□□□ -0.67
MARK3-210ENST00000556463 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
MARK3-210ENST00000556463 CHMP4AQ9BY43 222 aa10.84□□□□□ -0.67
MARK3-210ENST00000556463 NRXN1Q9ULB1 1477 aa10.84□□□□□ -0.67
MARK3-210ENST00000556463 WWC1Q8IX03 1113 aa10.84□□□□□ -0.67
MARK3-210ENST00000556463 ZC3H13Q5T200 1668 aaKnown RBP10.84□□□□□ -0.67
MARK3-210ENST00000556463 MYOM2P54296 1465 aa10.84□□□□□ -0.67
MARK3-210ENST00000556463 MCM4P33991 863 aa10.83□□□□□ -0.67
MARK3-210ENST00000556463 PCDHB15Q9Y5E8 787 aa10.83□□□□□ -0.67
MARK3-210ENST00000556463 SBNO2Q9Y2G9 1366 aa10.83□□□□□ -0.68
MARK3-210ENST00000556463 ADGRB2O60241 1585 aa10.83□□□□□ -0.68
MARK3-210ENST00000556463 MAP3K4Q9Y6R4 1608 aa10.83□□□□□ -0.68
MARK3-210ENST00000556463 TET3O43151 1660 aa10.83□□□□□ -0.68
MARK3-210ENST00000556463 RARSP54136 660 aaKnown RBP10.83□□□□□ -0.68
MARK3-210ENST00000556463 TAF7LQ5H9L4 462 aa10.83□□□□□ -0.68
MARK3-210ENST00000556463 PMFBP1Q8TBY8 1022 aa10.83□□□□□ -0.68
MARK3-210ENST00000556463 KIAA1211Q6ZU35 1233 aa10.82□□□□□ -0.68
MARK3-210ENST00000556463 CENPJQ9HC77 1338 aaPredicted RBP10.82□□□□□ -0.68
MARK3-210ENST00000556463 ABCA6Q8N139 1617 aa10.82□□□□□ -0.68
MARK3-210ENST00000556463 INO80Q9ULG1 1556 aaPredicted RBP10.82□□□□□ -0.68
MARK3-210ENST00000556463 CCDC146Q8IYE0 955 aa10.82□□□□□ -0.68
MARK3-210ENST00000556463 CARD14Q9BXL6 1004 aa10.82□□□□□ -0.68
MARK3-210ENST00000556463 ISY1Q9ULR0 285 aaKnown RBP10.82□□□□□ -0.68
MARK3-210ENST00000556463 ARHGAP5Q13017 1502 aa10.82□□□□□ -0.68
MARK3-210ENST00000556463 PDCL3Q9H2J4 239 aa10.82□□□□□ -0.68
MARK3-210ENST00000556463 CCDC27Q2M243 656 aa10.81□□□□□ -0.68
MARK3-210ENST00000556463 ABCC1P33527 1531 aa10.81□□□□□ -0.68
MARK3-210ENST00000556463 PANK1Q8TE04 598 aa10.81□□□□□ -0.68
MARK3-210ENST00000556463 RLBP1P12271 317 aa10.81□□□□□ -0.68
MARK3-210ENST00000556463 COG6Q9Y2V7 657 aa10.8□□□□□ -0.68
MARK3-210ENST00000556463 R3HCC1Q9Y3T6 440 aaKnown RBP10.8□□□□□ -0.68
MARK3-210ENST00000556463 ARHGAP31Q2M1Z3 1444 aa10.8□□□□□ -0.68
MARK3-210ENST00000556463 ADGRL1O94910 1474 aa10.8□□□□□ -0.68
MARK3-210ENST00000556463 DNTTIP2Q5QJE6 756 aaKnown RBP10.79□□□□□ -0.68
MARK3-210ENST00000556463 WDR63Q8IWG1 891 aa10.79□□□□□ -0.68
MARK3-210ENST00000556463 CHMP7Q8WUX9 453 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms