RNA–Protein interactions for RNA: ENST00000556321.1

PSMA3-210, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 500 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-210ENST00000556321 VARS2Q5ST30 1063 aaKnown RBP8.64□□□□□ -1.03
PSMA3-210ENST00000556321 PBXIP1Q96AQ6 731 aa8.64□□□□□ -1.03
PSMA3-210ENST00000556321 TRIM34Q9BYJ4 488 aa8.64□□□□□ -1.03
PSMA3-210ENST00000556321 PCDHGC3Q9UN70 934 aa8.64□□□□□ -1.03
PSMA3-210ENST00000556321 ACIN1Q9UKV3 1341 aaKnown RBP8.63□□□□□ -1.03
PSMA3-210ENST00000556321 SMAPO00193 183 aa8.63□□□□□ -1.03
PSMA3-210ENST00000556321 RSPH4AQ5TD94 716 aa8.63□□□□□ -1.03
PSMA3-210ENST00000556321 PROX2Q3B8N5 592 aa8.62□□□□□ -1.03
PSMA3-210ENST00000556321 HDGFL1Q5TGJ6 251 aa8.62□□□□□ -1.03
PSMA3-210ENST00000556321 HMX1Q9NP08 348 aaPredicted RBP8.62□□□□□ -1.03
PSMA3-210ENST00000556321 PLA2G2EQ9NZK7 142 aa8.62□□□□□ -1.03
PSMA3-210ENST00000556321 SLC10A3P09131 477 aa8.61□□□□□ -1.03
PSMA3-210ENST00000556321 SRPK2P78362 688 aaKnown RBP8.61□□□□□ -1.03
PSMA3-210ENST00000556321 CTDSPL2Q05D32 466 aa8.61□□□□□ -1.03
PSMA3-210ENST00000556321 CFAP70Q5T0N1 1121 aa8.61□□□□□ -1.03
PSMA3-210ENST00000556321 ZNF687Q8N1G0 1237 aa8.61□□□□□ -1.03
PSMA3-210ENST00000556321 MTMR2Q13614 643 aa8.6□□□□□ -1.03
PSMA3-210ENST00000556321 USTQ9Y2C2 406 aa8.6□□□□□ -1.03
PSMA3-210ENST00000556321 GUCA2AQ02747 115 aa8.59□□□□□ -1.03
PSMA3-210ENST00000556321 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
PSMA3-210ENST00000556321 ZBED2Q9BTP6 218 aa8.59□□□□□ -1.03
PSMA3-210ENST00000556321 PATL2C9JE40 543 aaKnown RBP8.58□□□□□ -1.04
PSMA3-210ENST00000556321 SWT1Q5T5J6 900 aaKnown RBP8.58□□□□□ -1.04
PSMA3-210ENST00000556321 HLA-CQ95604 372 aa8.58□□□□□ -1.04
PSMA3-210ENST00000556321 KCNK17Q96T54 332 aa8.58□□□□□ -1.04
PSMA3-210ENST00000556321 ALG2Q9H553 416 aa8.58□□□□□ -1.04
PSMA3-210ENST00000556321 KIAA1468Q9P260 1216 aa8.58□□□□□ -1.04
PSMA3-210ENST00000556321 CFAP99D6REC4 459 aa8.57□□□□□ -1.04
PSMA3-210ENST00000556321 TMCO4Q5TGY1 634 aa8.57□□□□□ -1.04
PSMA3-210ENST00000556321 RGS22Q8NE09 1264 aa8.57□□□□□ -1.04
PSMA3-210ENST00000556321 PPP1R12CQ9BZL4 782 aa8.57□□□□□ -1.04
PSMA3-210ENST00000556321 VAC14Q08AM6 782 aa8.56□□□□□ -1.04
PSMA3-210ENST00000556321 LRRN4Q8WUT4 740 aa8.56□□□□□ -1.04
PSMA3-210ENST00000556321 GZF1Q9H116 711 aaPredicted RBP8.56□□□□□ -1.04
PSMA3-210ENST00000556321 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.55□□□□□ -1.04
PSMA3-210ENST00000556321 BRD1O95696 1058 aa8.55□□□□□ -1.04
PSMA3-210ENST00000556321 SOX11P35716 441 aa8.55□□□□□ -1.04
PSMA3-210ENST00000556321 KCNA1Q09470 495 aa8.55□□□□□ -1.04
PSMA3-210ENST00000556321 KCNH8Q96L42 1107 aa8.55□□□□□ -1.04
PSMA3-210ENST00000556321 SLC4A5Q9BY07 1137 aa8.55□□□□□ -1.04
PSMA3-210ENST00000556321 GRIPAP1Q4V328 841 aa8.54□□□□□ -1.04
PSMA3-210ENST00000556321 RABGEF1Q9UJ41 708 aa8.54□□□□□ -1.04
PSMA3-210ENST00000556321 PALM3A6NDB9 673 aaPredicted RBP8.53□□□□□ -1.04
PSMA3-210ENST00000556321 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
PSMA3-210ENST00000556321 CSB-PGBD3P0DP91 1061 aa8.52□□□□□ -1.05
PSMA3-210ENST00000556321 RFX1P22670 979 aa8.52□□□□□ -1.05
PSMA3-210ENST00000556321 MFAP1P55081 439 aaKnown RBP8.52□□□□□ -1.05
PSMA3-210ENST00000556321 EPS8L1Q8TE68 723 aa8.52□□□□□ -1.05
PSMA3-210ENST00000556321 FUT2Q10981 343 aa8.51□□□□□ -1.05
PSMA3-210ENST00000556321 ANKRD13DQ6ZTN6 518 aa8.51□□□□□ -1.05
PSMA3-210ENST00000556321 SLF2Q8IX21 1173 aa8.51□□□□□ -1.05
PSMA3-210ENST00000556321 C6orf229H3BNL8 230 aa8.5□□□□□ -1.05
PSMA3-210ENST00000556321 SLC4A3P48751 1232 aa8.5□□□□□ -1.05
PSMA3-210ENST00000556321 FAM98CQ17RN3 349 aaKnown RBP8.5□□□□□ -1.05
PSMA3-210ENST00000556321 PRR7Q8TB68 274 aa8.5□□□□□ -1.05
PSMA3-210ENST00000556321 TSC1Q92574 1164 aa8.5□□□□□ -1.05
PSMA3-210ENST00000556321 ATG7O95352 703 aa8.49□□□□□ -1.05
PSMA3-210ENST00000556321 CFHP08603 1231 aa8.49□□□□□ -1.05
PSMA3-210ENST00000556321 ATP6V1AP38606 617 aa8.49□□□□□ -1.05
PSMA3-210ENST00000556321 HCSTQ9UBK5 93 aa8.49□□□□□ -1.05
PSMA3-210ENST00000556321 SEPT9Q9UHD8 586 aaPredicted RBP8.49□□□□□ -1.05
PSMA3-210ENST00000556321 LMOD1P29536 600 aaPredicted RBP8.48□□□□□ -1.05
PSMA3-210ENST00000556321 HDGFP51858 240 aaKnown RBP8.48□□□□□ -1.05
PSMA3-210ENST00000556321 DESI1Q6ICB0 168 aa8.48□□□□□ -1.05
PSMA3-210ENST00000556321 TFIP11Q9UBB9 837 aaKnown RBP8.48□□□□□ -1.05
PSMA3-210ENST00000556321 MTMR7Q9Y216 660 aa8.48□□□□□ -1.05
PSMA3-210ENST00000556321 ARHGAP33O14559 1287 aa8.47□□□□□ -1.05
PSMA3-210ENST00000556321 PSEN2P49810 448 aa8.47□□□□□ -1.05
PSMA3-210ENST00000556321 NR6A1Q15406 480 aa8.47□□□□□ -1.05
PSMA3-210ENST00000556321 LAPTM4BQ86VI4 370 aa8.47□□□□□ -1.05
PSMA3-210ENST00000556321 RETREG3Q86VR2 466 aa8.47□□□□□ -1.05
PSMA3-210ENST00000556321 MAFBQ9Y5Q3 323 aaPredicted RBP8.47□□□□□ -1.05
PSMA3-210ENST00000556321 TMEM88BA6NKF7 163 aa8.46□□□□□ -1.06
PSMA3-210ENST00000556321 PER1O15534 1290 aaPredicted RBP8.46□□□□□ -1.06
PSMA3-210ENST00000556321 SEMA3FQ13275 785 aa8.46□□□□□ -1.06
PSMA3-210ENST00000556321 POTEEQ6S8J3 1075 aa8.46□□□□□ -1.06
PSMA3-210ENST00000556321 SYMPKQ92797 1274 aaKnown RBP8.46□□□□□ -1.06
PSMA3-210ENST00000556321 SAMD7Q7Z3H4 446 aa8.45□□□□□ -1.06
PSMA3-210ENST00000556321 PNMA1Q8ND90 353 aa8.45□□□□□ -1.06
PSMA3-210ENST00000556321 LSM11P83369 360 aaKnown RBP eCLIP8.44□□□□□ -1.06
PSMA3-210ENST00000556321 KMT5BQ4FZB7 885 aa8.44□□□□□ -1.06
PSMA3-210ENST00000556321 MORN1Q5T089 497 aa8.44□□□□□ -1.06
PSMA3-210ENST00000556321 ATP9BO43861 1147 aa8.43□□□□□ -1.06
PSMA3-210ENST00000556321 EIF4G2P78344 907 aaKnown RBP eCLIP8.43□□□□□ -1.06
PSMA3-210ENST00000556321 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
PSMA3-210ENST00000556321 TBC1D9Q6ZT07 1266 aa8.43□□□□□ -1.06
PSMA3-210ENST00000556321 VRTNQ9H8Y1 702 aa8.43□□□□□ -1.06
PSMA3-210ENST00000556321 VPS9D1Q9Y2B5 631 aa8.43□□□□□ -1.06
PSMA3-210ENST00000556321 CARNS1A5YM72 827 aa8.42□□□□□ -1.06
PSMA3-210ENST00000556321 ACTN4O43707 911 aaKnown RBP8.42□□□□□ -1.06
PSMA3-210ENST00000556321 NR1H3Q13133 447 aa8.42□□□□□ -1.06
PSMA3-210ENST00000556321 Q3C1V9 767 aa8.42□□□□□ -1.06
PSMA3-210ENST00000556321 LYPD8Q6UX82 237 aa8.42□□□□□ -1.06
PSMA3-210ENST00000556321 PBX2P40425 430 aa8.41□□□□□ -1.06
PSMA3-210ENST00000556321 ELOAQ14241 798 aaKnown RBP8.41□□□□□ -1.06
PSMA3-210ENST00000556321 NFATC2IPQ8NCF5 419 aa8.41□□□□□ -1.06
PSMA3-210ENST00000556321 SLC27A5Q9Y2P5 690 aa8.4□□□□□ -1.06
PSMA3-210ENST00000556321 IVNS1ABPQ9Y6Y0 642 aa8.4□□□□□ -1.06
PSMA3-210ENST00000556321 BHMG1C9JSJ3 638 aaPredicted RBP8.39□□□□□ -1.07
PSMA3-210ENST00000556321 KANK4Q5T7N3 995 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms