RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 RABGEF1Q9UJ41 708 aa7.2□□□□□ -1.26
SPTLC2-204ENST00000556264 CFAP99D6REC4 459 aa7.19□□□□□ -1.26
SPTLC2-204ENST00000556264 SLC4A3P48751 1232 aa7.19□□□□□ -1.26
SPTLC2-204ENST00000556264 GRIPAP1Q4V328 841 aa7.19□□□□□ -1.26
SPTLC2-204ENST00000556264 GPR37L1O60883 481 aa7.18□□□□□ -1.26
SPTLC2-204ENST00000556264 RFX1P22670 979 aa7.18□□□□□ -1.26
SPTLC2-204ENST00000556264 VAC14Q08AM6 782 aa7.18□□□□□ -1.26
SPTLC2-204ENST00000556264 FUT2Q10981 343 aa7.18□□□□□ -1.26
SPTLC2-204ENST00000556264 ARHGAP33O14559 1287 aa7.17□□□□□ -1.26
SPTLC2-204ENST00000556264 FAM98CQ17RN3 349 aaKnown RBP7.17□□□□□ -1.26
SPTLC2-204ENST00000556264 SLF2Q8IX21 1173 aa7.17□□□□□ -1.26
SPTLC2-204ENST00000556264 EPS8L1Q8TE68 723 aa7.17□□□□□ -1.26
SPTLC2-204ENST00000556264 SYMPKQ92797 1274 aaKnown RBP7.17□□□□□ -1.26
SPTLC2-204ENST00000556264 CFHP08603 1231 aa7.16□□□□□ -1.26
SPTLC2-204ENST00000556264 PDE4CQ08493 712 aa7.16□□□□□ -1.26
SPTLC2-204ENST00000556264 DMRTA1Q5VZB9 504 aa7.16□□□□□ -1.26
SPTLC2-204ENST00000556264 SAMD7Q7Z3H4 446 aa7.16□□□□□ -1.26
SPTLC2-204ENST00000556264 PBXIP1Q96AQ6 731 aa7.16□□□□□ -1.26
SPTLC2-204ENST00000556264 SLC4A5Q9BY07 1137 aa7.16□□□□□ -1.26
SPTLC2-204ENST00000556264 AXIN2Q9Y2T1 843 aa7.16□□□□□ -1.26
SPTLC2-204ENST00000556264 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.15□□□□□ -1.26
SPTLC2-204ENST00000556264 ATP6V1AP38606 617 aa7.15□□□□□ -1.26
SPTLC2-204ENST00000556264 CFAP70Q5T0N1 1121 aa7.15□□□□□ -1.26
SPTLC2-204ENST00000556264 POTEEQ6S8J3 1075 aa7.15□□□□□ -1.26
SPTLC2-204ENST00000556264 PRR7Q8TB68 274 aa7.15□□□□□ -1.26
SPTLC2-204ENST00000556264 PPP1R12CQ9BZL4 782 aa7.15□□□□□ -1.26
SPTLC2-204ENST00000556264 ALG2Q9H553 416 aa7.15□□□□□ -1.26
SPTLC2-204ENST00000556264 ERBB3P21860 1342 aa7.15□□□□□ -1.26
SPTLC2-204ENST00000556264 RNF40O75150 1001 aa7.14□□□□□ -1.27
SPTLC2-204ENST00000556264 NR6A1Q15406 480 aa7.14□□□□□ -1.27
SPTLC2-204ENST00000556264 VARS2Q5ST30 1063 aaKnown RBP7.14□□□□□ -1.27
SPTLC2-204ENST00000556264 GZF1Q9H116 711 aaPredicted RBP7.13□□□□□ -1.27
SPTLC2-204ENST00000556264 VPS9D1Q9Y2B5 631 aa7.13□□□□□ -1.27
SPTLC2-204ENST00000556264 PALM3A6NDB9 673 aaPredicted RBP7.12□□□□□ -1.27
SPTLC2-204ENST00000556264 PER1O15534 1290 aaPredicted RBP7.12□□□□□ -1.27
SPTLC2-204ENST00000556264 SRPK2P78362 688 aaKnown RBP7.12□□□□□ -1.27
SPTLC2-204ENST00000556264 TFIP11Q9UBB9 837 aaKnown RBP7.12□□□□□ -1.27
SPTLC2-204ENST00000556264 CSB-PGBD3P0DP91 1061 aa7.11□□□□□ -1.27
SPTLC2-204ENST00000556264 LMOD1P29536 600 aaPredicted RBP7.11□□□□□ -1.27
SPTLC2-204ENST00000556264 KMT5BQ4FZB7 885 aa7.11□□□□□ -1.27
SPTLC2-204ENST00000556264 LAPTM4BQ86VI4 370 aa7.11□□□□□ -1.27
SPTLC2-204ENST00000556264 SOX11P35716 441 aa7.1□□□□□ -1.27
SPTLC2-204ENST00000556264 SEMA3FQ13275 785 aa7.1□□□□□ -1.27
SPTLC2-204ENST00000556264 PUS10Q3MIT2 529 aaKnown RBP7.1□□□□□ -1.27
SPTLC2-204ENST00000556264 MORN1Q5T089 497 aa7.1□□□□□ -1.27
SPTLC2-204ENST00000556264 RETREG3Q86VR2 466 aa7.1□□□□□ -1.27
SPTLC2-204ENST00000556264 PNMA1Q8ND90 353 aa7.1□□□□□ -1.27
SPTLC2-204ENST00000556264 PBX2P40425 430 aa7.09□□□□□ -1.27
SPTLC2-204ENST00000556264 Q3C1V9 767 aa7.09□□□□□ -1.27
SPTLC2-204ENST00000556264 CDCA8Q53HL2 280 aa7.09□□□□□ -1.27
SPTLC2-204ENST00000556264 TMCO4Q5TGY1 634 aa7.09□□□□□ -1.27
SPTLC2-204ENST00000556264 ZFRQ96KR1 1074 aaKnown RBP7.09□□□□□ -1.27
SPTLC2-204ENST00000556264 UCN2Q96RP3 112 aa7.09□□□□□ -1.27
SPTLC2-204ENST00000556264 NBPF3Q9H094 633 aa7.09□□□□□ -1.27
SPTLC2-204ENST00000556264 SLC27A5Q9Y2P5 690 aa7.09□□□□□ -1.27
SPTLC2-204ENST00000556264 CARNS1A5YM72 827 aa7.08□□□□□ -1.28
SPTLC2-204ENST00000556264 USTQ9Y2C2 406 aa7.08□□□□□ -1.28
SPTLC2-204ENST00000556264 BHMG1C9JSJ3 638 aaPredicted RBP7.07□□□□□ -1.28
SPTLC2-204ENST00000556264 DESI1Q6ICB0 168 aa7.07□□□□□ -1.28
SPTLC2-204ENST00000556264 LYPD8Q6UX82 237 aa7.07□□□□□ -1.28
SPTLC2-204ENST00000556264 OTUD5Q96G74 571 aa7.07□□□□□ -1.28
SPTLC2-204ENST00000556264 PATL2C9JE40 543 aaKnown RBP7.06□□□□□ -1.28
SPTLC2-204ENST00000556264 ACTN4O43707 911 aaKnown RBP7.06□□□□□ -1.28
SPTLC2-204ENST00000556264 BRD1O95696 1058 aa7.06□□□□□ -1.28
SPTLC2-204ENST00000556264 EIF4G2P78344 907 aaKnown RBP eCLIP7.06□□□□□ -1.28
SPTLC2-204ENST00000556264 TBC1D9Q6ZT07 1266 aa7.06□□□□□ -1.28
SPTLC2-204ENST00000556264 MAFBQ9Y5Q3 323 aaPredicted RBP7.06□□□□□ -1.28
SPTLC2-204ENST00000556264 EMP3P54852 163 aa7.05□□□□□ -1.28
SPTLC2-204ENST00000556264 KCNA1Q09470 495 aa7.05□□□□□ -1.28
SPTLC2-204ENST00000556264 ZNF687Q8N1G0 1237 aa7.05□□□□□ -1.28
SPTLC2-204ENST00000556264 MRPL50Q8N5N7 158 aaKnown RBP7.05□□□□□ -1.28
SPTLC2-204ENST00000556264 LRCH3Q96II8 777 aa7.05□□□□□ -1.28
SPTLC2-204ENST00000556264 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.05□□□□□ -1.28
SPTLC2-204ENST00000556264 ATG7O95352 703 aa7.04□□□□□ -1.28
SPTLC2-204ENST00000556264 MFAP1P55081 439 aaKnown RBP7.04□□□□□ -1.28
SPTLC2-204ENST00000556264 NR1H3Q13133 447 aa7.04□□□□□ -1.28
SPTLC2-204ENST00000556264 BLOC1S3Q6QNY0 202 aa7.04□□□□□ -1.28
SPTLC2-204ENST00000556264 RNF19BQ6ZMZ0 732 aa7.04□□□□□ -1.28
SPTLC2-204ENST00000556264 RGS22Q8NE09 1264 aa7.04□□□□□ -1.28
SPTLC2-204ENST00000556264 MARVELD3Q96A59 401 aa7.04□□□□□ -1.28
SPTLC2-204ENST00000556264 USB1Q9BQ65 265 aaKnown RBP7.04□□□□□ -1.28
SPTLC2-204ENST00000556264 MTMR7Q9Y216 660 aa7.04□□□□□ -1.28
SPTLC2-204ENST00000556264 FAM205CA6NFA0 338 aa7.03□□□□□ -1.28
SPTLC2-204ENST00000556264 ATP9BO43861 1147 aa7.03□□□□□ -1.28
SPTLC2-204ENST00000556264 FBXO45P0C2W1 286 aa7.03□□□□□ -1.28
SPTLC2-204ENST00000556264 ZBBXA8MT70 800 aa7.02□□□□□ -1.29
SPTLC2-204ENST00000556264 TK2O00142 265 aa7.02□□□□□ -1.29
SPTLC2-204ENST00000556264 ST18O60284 1047 aa7.02□□□□□ -1.29
SPTLC2-204ENST00000556264 BRICD5Q6PL45 260 aa7.02□□□□□ -1.29
SPTLC2-204ENST00000556264 PRR14Q9BWN1 585 aa7.02□□□□□ -1.29
SPTLC2-204ENST00000556264 VRTNQ9H8Y1 702 aa7.02□□□□□ -1.29
SPTLC2-204ENST00000556264 FKBPLQ9UIM3 349 aa7.02□□□□□ -1.29
SPTLC2-204ENST00000556264 PPP4CP60510 307 aa7.01□□□□□ -1.29
SPTLC2-204ENST00000556264 SCUBE3Q8IX30 993 aa7.01□□□□□ -1.29
SPTLC2-204ENST00000556264 TMEM88BA6NKF7 163 aa7□□□□□ -1.29
SPTLC2-204ENST00000556264 PIK3CDO00329 1044 aa7□□□□□ -1.29
SPTLC2-204ENST00000556264 KANK4Q5T7N3 995 aaPredicted RBP7□□□□□ -1.29
SPTLC2-204ENST00000556264 MAP10Q9P2G4 905 aa7□□□□□ -1.29
SPTLC2-204ENST00000556264 SALL2Q9Y467 1007 aaPredicted RBP7□□□□□ -1.29
SPTLC2-204ENST00000556264 FMNL1O95466 1100 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms