RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CFAP70Q5T0N1 1121 aa15.19■□□□□ 0.02
TMEM260-206ENST00000555046 SIRT1Q96EB6 747 aa15.19■□□□□ 0.02
TMEM260-206ENST00000555046 C19orf44Q9H6X5 657 aa15.18■□□□□ 0.02
TMEM260-206ENST00000555046 MYOM2P54296 1465 aa15.17■□□□□ 0.02
TMEM260-206ENST00000555046 TONSLQ96HA7 1378 aa15.17■□□□□ 0.02
TMEM260-206ENST00000555046 PIK3C2GO75747 1445 aa15.17■□□□□ 0.02
TMEM260-206ENST00000555046 TMEM132EQ6IEE7 984 aa15.16■□□□□ 0.02
TMEM260-206ENST00000555046 STK26Q9P289 416 aa15.16■□□□□ 0.02
TMEM260-206ENST00000555046 MYO5BQ9ULV0 1848 aa15.15■□□□□ 0.02
TMEM260-206ENST00000555046 ATF3P18847 181 aa15.15■□□□□ 0.02
TMEM260-206ENST00000555046 CADPS2Q86UW7 1296 aa15.15■□□□□ 0.02
TMEM260-206ENST00000555046 QTRT2Q9H974 415 aaKnown RBP15.15■□□□□ 0.02
TMEM260-206ENST00000555046 NRXN1Q9ULB1 1477 aa15.14■□□□□ 0.01
TMEM260-206ENST00000555046 ABCC11Q96J66 1382 aa15.14■□□□□ 0.01
TMEM260-206ENST00000555046 YY1P25490 414 aa15.14■□□□□ 0.01
TMEM260-206ENST00000555046 LRPPRCP42704 1394 aaKnown RBP15.13■□□□□ 0.01
TMEM260-206ENST00000555046 PTPRUQ92729 1446 aa15.12■□□□□ 0.01
TMEM260-206ENST00000555046 POGKQ9P215 609 aa15.11■□□□□ 0.01
TMEM260-206ENST00000555046 BCL9LQ86UU0 1499 aa15.11■□□□□ 0.01
TMEM260-206ENST00000555046 PPLO60437 1756 aa15.09■□□□□ 0.01
TMEM260-206ENST00000555046 C8orf37Q96NL8 207 aa15.09■□□□□ 0.01
TMEM260-206ENST00000555046 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.09■□□□□ 0.01
TMEM260-206ENST00000555046 PTCH1Q13635 1447 aa15.09■□□□□ 0.01
TMEM260-206ENST00000555046 YTHDC2Q9H6S0 1430 aaKnown RBP15.09■□□□□ 0.01
TMEM260-206ENST00000555046 CCDC125Q86Z20 511 aa15.08■□□□□ 0
TMEM260-206ENST00000555046 TRAK1Q9UPV9 953 aa15.08■□□□□ 0
TMEM260-206ENST00000555046 WAPLQ7Z5K2 1190 aa15.07■□□□□ 0
TMEM260-206ENST00000555046 NGLY1Q96IV0 654 aa15.07■□□□□ 0
TMEM260-206ENST00000555046 CHD2O14647 1828 aaKnown RBP15.07■□□□□ 0
TMEM260-206ENST00000555046 ROBO2Q9HCK4 1378 aa15.07■□□□□ 0
TMEM260-206ENST00000555046 PRAG1Q86YV5 1406 aa15.07■□□□□ 0
TMEM260-206ENST00000555046 PRAM1Q96QH2 718 aa15.06■□□□□ 0
TMEM260-206ENST00000555046 CEP350Q5VT06 3117 aa15.06■□□□□ 0
TMEM260-206ENST00000555046 TECPR2O15040 1411 aa15.06■□□□□ 0
TMEM260-206ENST00000555046 NRXN3Q9Y4C0 1643 aa15.06■□□□□ 0
TMEM260-206ENST00000555046 NBPF1Q3BBV0 1214 aa15.05■□□□□ -0
TMEM260-206ENST00000555046 BLMP54132 1417 aaPredicted RBP15.04■□□□□ -0
TMEM260-206ENST00000555046 DCCP43146 1447 aa15.03■□□□□ -0
TMEM260-206ENST00000555046 ROCK2O75116 1388 aaKnown RBP15.02■□□□□ -0
TMEM260-206ENST00000555046 SLC24A1O60721 1099 aa15.02■□□□□ -0
TMEM260-206ENST00000555046 ASXL1Q8IXJ9 1541 aa15.02□□□□□ -0.01
TMEM260-206ENST00000555046 ADGRL3Q9HAR2 1447 aa15.01□□□□□ -0.01
TMEM260-206ENST00000555046 IFT172Q9UG01 1749 aa15.01□□□□□ -0.01
TMEM260-206ENST00000555046 NBPF8Q3BBV2 869 aa15.01□□□□□ -0.01
TMEM260-206ENST00000555046 DEFB132Q7Z7B7 95 aa15.01□□□□□ -0.01
TMEM260-206ENST00000555046 CARD11Q9BXL7 1154 aa15.01□□□□□ -0.01
TMEM260-206ENST00000555046 ATRNO75882 1429 aa15□□□□□ -0.01
TMEM260-206ENST00000555046 LAMC1P11047 1609 aa15□□□□□ -0.01
TMEM260-206ENST00000555046 SENP3-EIF4A1A0A087X0R7 540 aa15□□□□□ -0.01
TMEM260-206ENST00000555046 PSDA5PKW4 1024 aaPredicted RBP15□□□□□ -0.01
TMEM260-206ENST00000555046 SAFB2Q14151 953 aaKnown RBP eCLIP15□□□□□ -0.01
TMEM260-206ENST00000555046 PNPLA6Q8IY17 1366 aa14.99□□□□□ -0.01
TMEM260-206ENST00000555046 BRWD3Q6RI45 1802 aa14.98□□□□□ -0.01
TMEM260-206ENST00000555046 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
TMEM260-206ENST00000555046 XRN1Q8IZH2 1706 aaKnown RBP14.97□□□□□ -0.01
TMEM260-206ENST00000555046 DLC1Q96QB1 1528 aa14.97□□□□□ -0.01
TMEM260-206ENST00000555046 CENPJQ9HC77 1338 aaPredicted RBP14.97□□□□□ -0.01
TMEM260-206ENST00000555046 BRINP3Q76B58 766 aa14.97□□□□□ -0.01
TMEM260-206ENST00000555046 ADGRB1O14514 1584 aa14.97□□□□□ -0.01
TMEM260-206ENST00000555046 WASLO00401 505 aaPredicted RBP14.96□□□□□ -0.01
TMEM260-206ENST00000555046 ESCO1Q5FWF5 840 aa14.96□□□□□ -0.01
TMEM260-206ENST00000555046 PLEKHH1Q9ULM0 1364 aa14.96□□□□□ -0.02
TMEM260-206ENST00000555046 MINK1Q8N4C8 1332 aaPredicted RBP14.95□□□□□ -0.02
TMEM260-206ENST00000555046 TRPC5Q9UL62 973 aaPredicted RBP14.95□□□□□ -0.02
TMEM260-206ENST00000555046 GPRASP1Q5JY77 1395 aa14.95□□□□□ -0.02
TMEM260-206ENST00000555046 HIRIP3Q9BW71 556 aaPredicted RBP14.93□□□□□ -0.02
TMEM260-206ENST00000555046 USP21Q9UK80 565 aa14.93□□□□□ -0.02
TMEM260-206ENST00000555046 ADAMTS2O95450 1211 aa14.92□□□□□ -0.02
TMEM260-206ENST00000555046 CDK19Q9BWU1 502 aa14.92□□□□□ -0.02
TMEM260-206ENST00000555046 KIAA1210Q9ULL0 1709 aa14.92□□□□□ -0.02
TMEM260-206ENST00000555046 EVC2Q86UK5 1308 aa14.92□□□□□ -0.02
TMEM260-206ENST00000555046 C1orf167Q5SNV9 1468 aa14.91□□□□□ -0.02
TMEM260-206ENST00000555046 NUTM2FA1L443 756 aa14.91□□□□□ -0.02
TMEM260-206ENST00000555046 LRRC59Q96AG4 307 aaKnown RBP14.91□□□□□ -0.02
TMEM260-206ENST00000555046 ORAI2Q96SN7 254 aa14.91□□□□□ -0.02
TMEM260-206ENST00000555046 MST1RQ04912 1400 aa14.91□□□□□ -0.02
TMEM260-206ENST00000555046 NPHP3Q7Z494 1330 aa14.9□□□□□ -0.02
TMEM260-206ENST00000555046 SRPK2P78362 688 aaKnown RBP14.89□□□□□ -0.03
TMEM260-206ENST00000555046 PSME1Q06323 249 aa14.89□□□□□ -0.03
TMEM260-206ENST00000555046 PHF8Q9UPP1 1060 aa14.89□□□□□ -0.03
TMEM260-206ENST00000555046 CCDC61Q9Y6R9 512 aa14.89□□□□□ -0.03
TMEM260-206ENST00000555046 UTRNP46939 3433 aa14.89□□□□□ -0.03
TMEM260-206ENST00000555046 MARF1Q9Y4F3 1742 aaKnown RBP14.89□□□□□ -0.03
TMEM260-206ENST00000555046 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
TMEM260-206ENST00000555046 FOXO3O43524 673 aa14.88□□□□□ -0.03
TMEM260-206ENST00000555046 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
TMEM260-206ENST00000555046 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.88□□□□□ -0.03
TMEM260-206ENST00000555046 KNDC1Q76NI1 1749 aa14.87□□□□□ -0.03
TMEM260-206ENST00000555046 GLI3P10071 1580 aa14.87□□□□□ -0.03
TMEM260-206ENST00000555046 ANKARQ7Z5J8 1434 aa14.87□□□□□ -0.03
TMEM260-206ENST00000555046 PUS7Q96PZ0 661 aaKnown RBP14.87□□□□□ -0.03
TMEM260-206ENST00000555046 ST20-MTHFSA0A0A6YYL1 179 aa14.86□□□□□ -0.03
TMEM260-206ENST00000555046 CDCA8Q53HL2 280 aa14.86□□□□□ -0.03
TMEM260-206ENST00000555046 FNBP4Q8N3X1 1017 aaPredicted RBP14.86□□□□□ -0.03
TMEM260-206ENST00000555046 CAMTA1Q9Y6Y1 1673 aa14.86□□□□□ -0.03
TMEM260-206ENST00000555046 NGDNQ8NEJ9 315 aaKnown RBP14.85□□□□□ -0.03
TMEM260-206ENST00000555046 CDC42BPGQ6DT37 1551 aa14.85□□□□□ -0.03
TMEM260-206ENST00000555046 EIF4G2P78344 907 aaKnown RBP eCLIP14.84□□□□□ -0.03
TMEM260-206ENST00000555046 COL22A1Q8NFW1 1626 aaPredicted RBP14.84□□□□□ -0.03
TMEM260-206ENST00000555046 SBNO2Q9Y2G9 1366 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms