RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 ADAM33Q9BZ11 813 aa9.55□□□□□ -0.88
FCF1-207ENST00000554973 PADI6Q6TGC4 694 aa9.54□□□□□ -0.88
FCF1-207ENST00000554973 TTC13Q8NBP0 860 aa9.54□□□□□ -0.88
FCF1-207ENST00000554973 NDUFB9Q9Y6M9 179 aa9.54□□□□□ -0.88
FCF1-207ENST00000554973 ZBED2Q9BTP6 218 aa9.53□□□□□ -0.88
FCF1-207ENST00000554973 RBM27Q9P2N5 1060 aaKnown RBP9.53□□□□□ -0.88
FCF1-207ENST00000554973 GOLGA8CPA6NN73 597 aa9.52□□□□□ -0.89
FCF1-207ENST00000554973 USP17L8P0C7I0 530 aa9.52□□□□□ -0.89
FCF1-207ENST00000554973 NUTM1Q86Y26 1132 aa9.52□□□□□ -0.89
FCF1-207ENST00000554973 RBM46Q8TBY0 533 aaKnown RBP9.52□□□□□ -0.89
FCF1-207ENST00000554973 CARNS1A5YM72 827 aa9.51□□□□□ -0.89
FCF1-207ENST00000554973 ATG7O95352 703 aa9.51□□□□□ -0.89
FCF1-207ENST00000554973 CD46P15529 392 aa9.51□□□□□ -0.89
FCF1-207ENST00000554973 QPCTQ16769 361 aa9.51□□□□□ -0.89
FCF1-207ENST00000554973 GJD4Q96KN9 370 aaPredicted RBP9.51□□□□□ -0.89
FCF1-207ENST00000554973 GNEQ9Y223 722 aaKnown RBP9.51□□□□□ -0.89
FCF1-207ENST00000554973 PALM3A6NDB9 673 aaPredicted RBP9.5□□□□□ -0.89
FCF1-207ENST00000554973 PPP1R3GB7ZBB8 358 aa9.5□□□□□ -0.89
FCF1-207ENST00000554973 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
FCF1-207ENST00000554973 RTL5Q5HYW3 569 aaPredicted RBP9.5□□□□□ -0.89
FCF1-207ENST00000554973 MRPL50Q8N5N7 158 aaKnown RBP9.5□□□□□ -0.89
FCF1-207ENST00000554973 NBPF3Q9H094 633 aa9.5□□□□□ -0.89
FCF1-207ENST00000554973 PLA2G2EQ9NZK7 142 aa9.5□□□□□ -0.89
FCF1-207ENST00000554973 USP35Q9P2H5 1018 aa9.5□□□□□ -0.89
FCF1-207ENST00000554973 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.49□□□□□ -0.89
FCF1-207ENST00000554973 MOXD2PA6NHM9 499 aa9.49□□□□□ -0.89
FCF1-207ENST00000554973 TMEM88BA6NKF7 163 aa9.49□□□□□ -0.89
FCF1-207ENST00000554973 LMOD1P29536 600 aaPredicted RBP9.49□□□□□ -0.89
FCF1-207ENST00000554973 ALG2Q9H553 416 aa9.49□□□□□ -0.89
FCF1-207ENST00000554973 RBM47A0AV96 593 aaKnown RBP9.48□□□□□ -0.89
FCF1-207ENST00000554973 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
FCF1-207ENST00000554973 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
FCF1-207ENST00000554973 BHMG1C9JSJ3 638 aaPredicted RBP9.48□□□□□ -0.89
FCF1-207ENST00000554973 HSP90B1P14625 803 aaKnown RBP9.48□□□□□ -0.89
FCF1-207ENST00000554973 RSPH4AQ5TD94 716 aa9.48□□□□□ -0.89
FCF1-207ENST00000554973 NUTM2DQ5VT03 806 aaPredicted RBP9.48□□□□□ -0.89
FCF1-207ENST00000554973 PRPF38BQ5VTL8 546 aaKnown RBP9.48□□□□□ -0.89
FCF1-207ENST00000554973 NUTM2AQ8IVF1 878 aaPredicted RBP9.48□□□□□ -0.89
FCF1-207ENST00000554973 B4GALNT3Q6L9W6 998 aa9.47□□□□□ -0.89
FCF1-207ENST00000554973 SULF1Q8IWU6 871 aa9.47□□□□□ -0.89
FCF1-207ENST00000554973 PUS7Q96PZ0 661 aaKnown RBP9.47□□□□□ -0.89
FCF1-207ENST00000554973 PCDHB15Q9Y5E8 787 aa9.47□□□□□ -0.89
FCF1-207ENST00000554973 UNCXA6NJT0 531 aa9.46□□□□□ -0.9
FCF1-207ENST00000554973 C6orf132Q5T0Z8 1188 aa9.46□□□□□ -0.9
FCF1-207ENST00000554973 TFIP11Q9UBB9 837 aaKnown RBP9.46□□□□□ -0.9
FCF1-207ENST00000554973 NDUFV2P19404 249 aa9.45□□□□□ -0.9
FCF1-207ENST00000554973 PTPN5P54829 565 aa9.45□□□□□ -0.9
FCF1-207ENST00000554973 WNT2BQ93097 391 aa9.45□□□□□ -0.9
FCF1-207ENST00000554973 IGSF5Q9NSI5 407 aa9.45□□□□□ -0.9
FCF1-207ENST00000554973 SOX11P35716 441 aa9.44□□□□□ -0.9
FCF1-207ENST00000554973 RCCD1A6NED2 376 aa9.43□□□□□ -0.9
FCF1-207ENST00000554973 PRSS12P56730 875 aa9.43□□□□□ -0.9
FCF1-207ENST00000554973 VAC14Q08AM6 782 aa9.43□□□□□ -0.9
FCF1-207ENST00000554973 THSD4Q6ZMP0 1018 aa9.43□□□□□ -0.9
FCF1-207ENST00000554973 RABGEF1Q9UJ41 708 aa9.43□□□□□ -0.9
FCF1-207ENST00000554973 GPR37L1O60883 481 aa9.42□□□□□ -0.9
FCF1-207ENST00000554973 ERCC3P19447 782 aa9.42□□□□□ -0.9
FCF1-207ENST00000554973 COL9A1P20849 921 aa9.42□□□□□ -0.9
FCF1-207ENST00000554973 PROX2Q3B8N5 592 aa9.42□□□□□ -0.9
FCF1-207ENST00000554973 CABLES1Q8TDN4 633 aa9.42□□□□□ -0.9
FCF1-207ENST00000554973 UCN2Q96RP3 112 aa9.41□□□□□ -0.9
FCF1-207ENST00000554973 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
FCF1-207ENST00000554973 ZBTB3Q9H5J0 574 aa9.41□□□□□ -0.9
FCF1-207ENST00000554973 CDCA8Q53HL2 280 aa9.4□□□□□ -0.9
FCF1-207ENST00000554973 CCER1Q8TC90 406 aaPredicted RBP9.4□□□□□ -0.9
FCF1-207ENST00000554973 DDX11L8A8MPP1 907 aa9.39□□□□□ -0.91
FCF1-207ENST00000554973 CDCA7LQ96GN5 454 aa9.39□□□□□ -0.91
FCF1-207ENST00000554973 EYA1Q99502 592 aa9.39□□□□□ -0.91
FCF1-207ENST00000554973 MAFBQ9Y5Q3 323 aaPredicted RBP9.39□□□□□ -0.91
FCF1-207ENST00000554973 CDK11BP21127 795 aaKnown RBP9.38□□□□□ -0.91
FCF1-207ENST00000554973 CTDSPL2Q05D32 466 aa9.38□□□□□ -0.91
FCF1-207ENST00000554973 LAPTM4BQ86VI4 370 aa9.38□□□□□ -0.91
FCF1-207ENST00000554973 ANKK1Q8NFD2 765 aa9.38□□□□□ -0.91
FCF1-207ENST00000554973 PRR7Q8TB68 274 aa9.38□□□□□ -0.91
FCF1-207ENST00000554973 HMX1Q9NP08 348 aaPredicted RBP9.38□□□□□ -0.91
FCF1-207ENST00000554973 CDK11AQ9UQ88 783 aaPredicted RBP9.38□□□□□ -0.91
FCF1-207ENST00000554973 ELOAQ14241 798 aaKnown RBP9.37□□□□□ -0.91
FCF1-207ENST00000554973 TXNDC2Q86VQ3 553 aa9.37□□□□□ -0.91
FCF1-207ENST00000554973 KIAA1468Q9P260 1216 aa9.37□□□□□ -0.91
FCF1-207ENST00000554973 USP46P62068 366 aa9.36□□□□□ -0.91
FCF1-207ENST00000554973 TRIM6-TRIM34B2RNG4 842 aa9.35□□□□□ -0.91
FCF1-207ENST00000554973 KDM4AO75164 1064 aa9.35□□□□□ -0.91
FCF1-207ENST00000554973 SEMA3FQ13275 785 aa9.35□□□□□ -0.91
FCF1-207ENST00000554973 DNAJB2P25686 324 aa9.34□□□□□ -0.91
FCF1-207ENST00000554973 HELBQ8NG08 1087 aaPredicted RBP9.34□□□□□ -0.91
FCF1-207ENST00000554973 SIRT1Q96EB6 747 aa9.34□□□□□ -0.91
FCF1-207ENST00000554973 KIAA1522Q9P206 1035 aaPredicted RBP9.34□□□□□ -0.91
FCF1-207ENST00000554973 ATP9BO43861 1147 aa9.33□□□□□ -0.92
FCF1-207ENST00000554973 FDX1P10109 184 aa9.33□□□□□ -0.92
FCF1-207ENST00000554973 TBC1D9Q6ZT07 1266 aa9.33□□□□□ -0.92
FCF1-207ENST00000554973 MRRFQ96E11 262 aaKnown RBP9.33□□□□□ -0.92
FCF1-207ENST00000554973 ARID4AP29374 1257 aaPredicted RBP9.32□□□□□ -0.92
FCF1-207ENST00000554973 KANK4Q5T7N3 995 aaPredicted RBP9.32□□□□□ -0.92
FCF1-207ENST00000554973 DNAJC14Q6Y2X3 702 aaPredicted RBP9.32□□□□□ -0.92
FCF1-207ENST00000554973 ZFRQ96KR1 1074 aaKnown RBP9.32□□□□□ -0.92
FCF1-207ENST00000554973 PACS2Q86VP3 889 aa9.31□□□□□ -0.92
FCF1-207ENST00000554973 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
FCF1-207ENST00000554973 TMEM134Q9H6X4 195 aa9.31□□□□□ -0.92
FCF1-207ENST00000554973 FAM198AQ9UFP1 575 aa9.31□□□□□ -0.92
FCF1-207ENST00000554973 SEPT9Q9UHD8 586 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms