RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 PCDHGC3Q9UN70 934 aa9.62□□□□□ -0.87
PCNX1-208ENST00000554707 HLA-CQ95604 372 aa9.61□□□□□ -0.87
PCNX1-208ENST00000554707 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.61□□□□□ -0.87
PCNX1-208ENST00000554707 PLA2G2EQ9NZK7 142 aa9.61□□□□□ -0.87
PCNX1-208ENST00000554707 LIMD1Q9UGP4 676 aa9.61□□□□□ -0.87
PCNX1-208ENST00000554707 GUCA2AQ02747 115 aa9.6□□□□□ -0.87
PCNX1-208ENST00000554707 ZNF516Q92618 1163 aa9.6□□□□□ -0.87
PCNX1-208ENST00000554707 LILRB3O75022 631 aa9.59□□□□□ -0.87
PCNX1-208ENST00000554707 ADH1BP00325 375 aa9.59□□□□□ -0.87
PCNX1-208ENST00000554707 ZBTB3Q9H5J0 574 aa9.59□□□□□ -0.87
PCNX1-208ENST00000554707 PCDHB15Q9Y5E8 787 aa9.59□□□□□ -0.87
PCNX1-208ENST00000554707 MTMR2Q13614 643 aa9.58□□□□□ -0.88
PCNX1-208ENST00000554707 PPP2R2DQ66LE6 453 aa9.58□□□□□ -0.88
PCNX1-208ENST00000554707 RETREG3Q86VR2 466 aa9.58□□□□□ -0.88
PCNX1-208ENST00000554707 SPSB2Q99619 263 aa9.58□□□□□ -0.88
PCNX1-208ENST00000554707 USB1Q9BQ65 265 aaKnown RBP9.58□□□□□ -0.88
PCNX1-208ENST00000554707 MSS51Q4VC12 460 aa9.57□□□□□ -0.88
PCNX1-208ENST00000554707 PROCA1Q8NCQ7 364 aaPredicted RBP9.57□□□□□ -0.88
PCNX1-208ENST00000554707 C6orf229H3BNL8 230 aa9.56□□□□□ -0.88
PCNX1-208ENST00000554707 HRCP23327 699 aa9.56□□□□□ -0.88
PCNX1-208ENST00000554707 RNF19BQ6ZMZ0 732 aa9.56□□□□□ -0.88
PCNX1-208ENST00000554707 NUTM2BA6NNL0 878 aaPredicted RBP9.54□□□□□ -0.88
PCNX1-208ENST00000554707 NUTM2EB1AL46 878 aaPredicted RBP9.54□□□□□ -0.88
PCNX1-208ENST00000554707 NUTM2DQ5VT03 806 aaPredicted RBP9.54□□□□□ -0.88
PCNX1-208ENST00000554707 DESI1Q6ICB0 168 aa9.54□□□□□ -0.88
PCNX1-208ENST00000554707 NUTM2AQ8IVF1 878 aaPredicted RBP9.54□□□□□ -0.88
PCNX1-208ENST00000554707 ATP1B4Q9UN42 357 aaPredicted RBP9.54□□□□□ -0.88
PCNX1-208ENST00000554707 QPCTQ16769 361 aa9.53□□□□□ -0.88
PCNX1-208ENST00000554707 CSPP1Q1MSJ5 1256 aa9.53□□□□□ -0.88
PCNX1-208ENST00000554707 FAM160A2Q8N612 972 aaPredicted RBP9.53□□□□□ -0.88
PCNX1-208ENST00000554707 SYMPKQ92797 1274 aaKnown RBP9.53□□□□□ -0.88
PCNX1-208ENST00000554707 TLL1O43897 1013 aa9.52□□□□□ -0.89
PCNX1-208ENST00000554707 GGCXP38435 758 aa9.52□□□□□ -0.89
PCNX1-208ENST00000554707 NKX2-3Q8TAU0 364 aa9.52□□□□□ -0.89
PCNX1-208ENST00000554707 SLC6A16Q9GZN6 736 aa9.52□□□□□ -0.89
PCNX1-208ENST00000554707 MMP16P51512 607 aa9.51□□□□□ -0.89
PCNX1-208ENST00000554707 PRR7Q8TB68 274 aa9.51□□□□□ -0.89
PCNX1-208ENST00000554707 CABLES1Q8TDN4 633 aa9.51□□□□□ -0.89
PCNX1-208ENST00000554707 TMEM259Q4ZIN3 620 aa9.5□□□□□ -0.89
PCNX1-208ENST00000554707 RTL5Q5HYW3 569 aaPredicted RBP9.5□□□□□ -0.89
PCNX1-208ENST00000554707 DXOO77932 396 aaKnown RBP9.49□□□□□ -0.89
PCNX1-208ENST00000554707 JUNDP17535 347 aa9.49□□□□□ -0.89
PCNX1-208ENST00000554707 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.49□□□□□ -0.89
PCNX1-208ENST00000554707 CFAP99D6REC4 459 aa9.47□□□□□ -0.89
PCNX1-208ENST00000554707 RFC5P40937 340 aa9.47□□□□□ -0.89
PCNX1-208ENST00000554707 PPP1R18Q6NYC8 613 aa9.47□□□□□ -0.89
PCNX1-208ENST00000554707 HELBQ8NG08 1087 aaPredicted RBP9.47□□□□□ -0.89
PCNX1-208ENST00000554707 A0A0G2JS52 829 aa9.46□□□□□ -0.9
PCNX1-208ENST00000554707 S1PR4O95977 384 aa9.46□□□□□ -0.9
PCNX1-208ENST00000554707 LYPD8Q6UX82 237 aa9.46□□□□□ -0.9
PCNX1-208ENST00000554707 BANK1Q8NDB2 785 aa9.46□□□□□ -0.9
PCNX1-208ENST00000554707 FBXO31Q5XUX0 539 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-208ENST00000554707 ANKLE1Q8NAG6 615 aa9.45□□□□□ -0.9
PCNX1-208ENST00000554707 PTPRNQ16849 979 aa9.44□□□□□ -0.9
PCNX1-208ENST00000554707 RNF223E7ERA6 249 aa9.43□□□□□ -0.9
PCNX1-208ENST00000554707 PRDM9Q9NQV7 894 aa9.42□□□□□ -0.9
PCNX1-208ENST00000554707 SOCS7O14512 581 aa9.41□□□□□ -0.9
PCNX1-208ENST00000554707 AP1G2O75843 785 aa9.41□□□□□ -0.9
PCNX1-208ENST00000554707 EVA1BQ9NVM1 165 aa9.41□□□□□ -0.9
PCNX1-208ENST00000554707 RGS20O76081 388 aa9.4□□□□□ -0.9
PCNX1-208ENST00000554707 CCNYL3P0C7X3 344 aa9.4□□□□□ -0.9
PCNX1-208ENST00000554707 CTDSPL2Q05D32 466 aa9.4□□□□□ -0.9
PCNX1-208ENST00000554707 NUDT12Q9BQG2 462 aa9.4□□□□□ -0.9
PCNX1-208ENST00000554707 TSC1Q92574 1164 aa9.39□□□□□ -0.91
PCNX1-208ENST00000554707 FCF1Q9Y324 198 aaKnown RBP9.39□□□□□ -0.91
PCNX1-208ENST00000554707 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
PCNX1-208ENST00000554707 KCNH2Q12809 1159 aa9.37□□□□□ -0.91
PCNX1-208ENST00000554707 PER1O15534 1290 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-208ENST00000554707 F12P00748 615 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-208ENST00000554707 USP17L8P0C7I0 530 aa9.36□□□□□ -0.91
PCNX1-208ENST00000554707 RPIAP49247 311 aa9.36□□□□□ -0.91
PCNX1-208ENST00000554707 APBB1O00213 710 aa9.35□□□□□ -0.91
PCNX1-208ENST00000554707 FLIIQ13045 1269 aa9.35□□□□□ -0.91
PCNX1-208ENST00000554707 CCDC24Q8N4L8 307 aa9.35□□□□□ -0.91
PCNX1-208ENST00000554707 ZBTB24O43167 697 aaPredicted RBP9.34□□□□□ -0.91
PCNX1-208ENST00000554707 V9GY48 417 aaPredicted RBP9.34□□□□□ -0.91
PCNX1-208ENST00000554707 ARMC2Q8NEN0 867 aa9.33□□□□□ -0.92
PCNX1-208ENST00000554707 LRRN4Q8WUT4 740 aa9.33□□□□□ -0.92
PCNX1-208ENST00000554707 CD2BP2O95400 341 aaKnown RBP9.32□□□□□ -0.92
PCNX1-208ENST00000554707 CTHP32929 405 aa9.32□□□□□ -0.92
PCNX1-208ENST00000554707 PLA2G2CQ5R387 149 aa9.32□□□□□ -0.92
PCNX1-208ENST00000554707 SLC19A1P41440 591 aa9.31□□□□□ -0.92
PCNX1-208ENST00000554707 PTCRAQ6ISU1 281 aaPredicted RBP9.31□□□□□ -0.92
PCNX1-208ENST00000554707 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
PCNX1-208ENST00000554707 GTF3C3Q9Y5Q9 886 aa9.31□□□□□ -0.92
PCNX1-208ENST00000554707 UNC93B1Q9H1C4 597 aa9.3□□□□□ -0.92
PCNX1-208ENST00000554707 PRM3Q9NNZ6 103 aa9.3□□□□□ -0.92
PCNX1-208ENST00000554707 SNRKQ9NRH2 765 aa9.3□□□□□ -0.92
PCNX1-208ENST00000554707 LIAT1Q6ZQX7 453 aa9.29□□□□□ -0.92
PCNX1-208ENST00000554707 GPKOWQ92917 476 aaPredicted RBP eCLIP9.29□□□□□ -0.92
PCNX1-208ENST00000554707 PRKD2Q9BZL6 878 aa9.29□□□□□ -0.92
PCNX1-208ENST00000554707 MAP10Q9P2G4 905 aa9.29□□□□□ -0.92
PCNX1-208ENST00000554707 ZC3H4Q9UPT8 1303 aaKnown RBP9.29□□□□□ -0.92
PCNX1-208ENST00000554707 MCM6Q14566 821 aa9.28□□□□□ -0.92
PCNX1-208ENST00000554707 MTMR14Q8NCE2 650 aa9.28□□□□□ -0.92
PCNX1-208ENST00000554707 EMID1Q96A84 441 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-208ENST00000554707 GJD4Q96KN9 370 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-208ENST00000554707 TRIM34Q9BYJ4 488 aa9.28□□□□□ -0.92
PCNX1-208ENST00000554707 WNT7BP56706 349 aa9.27□□□□□ -0.93
PCNX1-208ENST00000554707 TRIM32Q13049 653 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms