RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
ATXN3-229ENST00000554672 RGS20O76081 388 aa8.34□□□□□ -1.07
ATXN3-229ENST00000554672 TJAP1Q5JTD0 557 aa8.34□□□□□ -1.07
ATXN3-229ENST00000554672 SWT1Q5T5J6 900 aaKnown RBP8.34□□□□□ -1.07
ATXN3-229ENST00000554672 KDM2AQ9Y2K7 1162 aa8.34□□□□□ -1.07
ATXN3-229ENST00000554672 UGGT2Q9NYU1 1516 aa8.34□□□□□ -1.08
ATXN3-229ENST00000554672 ARID4BQ4LE39 1312 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-229ENST00000554672 NUTM2FA1L443 756 aa8.33□□□□□ -1.08
ATXN3-229ENST00000554672 RAPGEF3O95398 923 aa8.33□□□□□ -1.08
ATXN3-229ENST00000554672 PTPRMP28827 1452 aa8.32□□□□□ -1.08
ATXN3-229ENST00000554672 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
ATXN3-229ENST00000554672 TESPA1A2RU30 521 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-229ENST00000554672 APLP1P51693 650 aa8.32□□□□□ -1.08
ATXN3-229ENST00000554672 FAM161AQ3B820 660 aa8.32□□□□□ -1.08
ATXN3-229ENST00000554672 ARAP3Q8WWN8 1544 aa8.31□□□□□ -1.08
ATXN3-229ENST00000554672 ADGRG1Q9Y653 693 aa8.31□□□□□ -1.08
ATXN3-229ENST00000554672 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
ATXN3-229ENST00000554672 ZCCHC11Q5TAX3 1644 aaKnown RBP8.3□□□□□ -1.08
ATXN3-229ENST00000554672 HDGFP51858 240 aaKnown RBP8.3□□□□□ -1.08
ATXN3-229ENST00000554672 MTRQ99707 1265 aa8.3□□□□□ -1.08
ATXN3-229ENST00000554672 RNF40O75150 1001 aa8.29□□□□□ -1.08
ATXN3-229ENST00000554672 HAP1P54257 671 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-229ENST00000554672 RBM26Q5T8P6 1007 aaKnown RBP8.29□□□□□ -1.08
ATXN3-229ENST00000554672 ZNF516Q92618 1163 aa8.29□□□□□ -1.08
ATXN3-229ENST00000554672 GOLGA3Q08378 1498 aa8.29□□□□□ -1.08
ATXN3-229ENST00000554672 ARID3CA6NKF2 412 aa8.28□□□□□ -1.08
ATXN3-229ENST00000554672 SOCS7O14512 581 aa8.28□□□□□ -1.08
ATXN3-229ENST00000554672 HSPA2P54652 639 aa8.28□□□□□ -1.08
ATXN3-229ENST00000554672 FCHSD2O94868 740 aa8.27□□□□□ -1.09
ATXN3-229ENST00000554672 KIAA0556O60303 1618 aa8.27□□□□□ -1.09
ATXN3-229ENST00000554672 SLF2Q8IX21 1173 aa8.26□□□□□ -1.09
ATXN3-229ENST00000554672 RCCD1A6NED2 376 aa8.25□□□□□ -1.09
ATXN3-229ENST00000554672 GPR37O15354 613 aa8.25□□□□□ -1.09
ATXN3-229ENST00000554672 FECHP22830 423 aa8.25□□□□□ -1.09
ATXN3-229ENST00000554672 DNAJB2P25686 324 aa8.25□□□□□ -1.09
ATXN3-229ENST00000554672 ILDR2Q71H61 639 aa8.25□□□□□ -1.09
ATXN3-229ENST00000554672 RBM46Q8TBY0 533 aaKnown RBP8.25□□□□□ -1.09
ATXN3-229ENST00000554672 TMEM134Q9H6X4 195 aa8.25□□□□□ -1.09
ATXN3-229ENST00000554672 IL21Q9HBE4 155 aa8.25□□□□□ -1.09
ATXN3-229ENST00000554672 ABCA8O94911 1581 aa8.25□□□□□ -1.09
ATXN3-229ENST00000554672 ATP10BO94823 1461 aa8.25□□□□□ -1.09
ATXN3-229ENST00000554672 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
ATXN3-229ENST00000554672 DISP3Q9P2K9 1392 aa8.24□□□□□ -1.09
ATXN3-229ENST00000554672 PCF11O94913 1555 aaKnown RBP8.24□□□□□ -1.09
ATXN3-229ENST00000554672 NKX2-3Q8TAU0 364 aa8.24□□□□□ -1.09
ATXN3-229ENST00000554672 NEO1Q92859 1461 aa8.24□□□□□ -1.09
ATXN3-229ENST00000554672 KIF21BO75037 1637 aa8.23□□□□□ -1.09
ATXN3-229ENST00000554672 ADAMTSL3P82987 1691 aa8.23□□□□□ -1.09
ATXN3-229ENST00000554672 PLEKHD1A6NEE1 506 aa8.22□□□□□ -1.09
ATXN3-229ENST00000554672 PXYLP1Q8TE99 480 aa8.22□□□□□ -1.09
ATXN3-229ENST00000554672 POGZQ7Z3K3 1410 aa8.21□□□□□ -1.09
ATXN3-229ENST00000554672 SLC10A3P09131 477 aa8.21□□□□□ -1.1
ATXN3-229ENST00000554672 COPS2P61201 443 aa8.21□□□□□ -1.1
ATXN3-229ENST00000554672 HIC1Q14526 733 aa8.21□□□□□ -1.1
ATXN3-229ENST00000554672 PPP1R18Q6NYC8 613 aa8.21□□□□□ -1.1
ATXN3-229ENST00000554672 IRX2Q9BZI1 471 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-229ENST00000554672 MLECQ14165 292 aa8.2□□□□□ -1.1
ATXN3-229ENST00000554672 NECTIN2Q92692 538 aa8.2□□□□□ -1.1
ATXN3-229ENST00000554672 DENND4BO75064 1496 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-229ENST00000554672 SMYD5Q6GMV2 418 aa8.19□□□□□ -1.1
ATXN3-229ENST00000554672 METTL3Q86U44 580 aaKnown RBP8.19□□□□□ -1.1
ATXN3-229ENST00000554672 AKNAQ7Z591 1439 aa8.19□□□□□ -1.1
ATXN3-229ENST00000554672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.18□□□□□ -1.1
ATXN3-229ENST00000554672 GNPATO15228 680 aa8.18□□□□□ -1.1
ATXN3-229ENST00000554672 ZPR1O75312 459 aa8.18□□□□□ -1.1
ATXN3-229ENST00000554672 OATP04181 439 aa8.18□□□□□ -1.1
ATXN3-229ENST00000554672 BLOC1S3Q6QNY0 202 aa8.18□□□□□ -1.1
ATXN3-229ENST00000554672 FHOD3Q2V2M9 1422 aa8.18□□□□□ -1.1
ATXN3-229ENST00000554672 SLC4A3P48751 1232 aa8.17□□□□□ -1.1
ATXN3-229ENST00000554672 PCDHB3Q9Y5E6 796 aa8.17□□□□□ -1.1
ATXN3-229ENST00000554672 PRXQ9BXM0 1461 aa8.17□□□□□ -1.1
ATXN3-229ENST00000554672 BCORL1Q5H9F3 1711 aa8.16□□□□□ -1.1
ATXN3-229ENST00000554672 ABCA9Q8IUA7 1624 aa8.16□□□□□ -1.1
ATXN3-229ENST00000554672 VSIG10Q8N0Z9 540 aa8.16□□□□□ -1.1
ATXN3-229ENST00000554672 MADDQ8WXG6 1647 aa8.16□□□□□ -1.1
ATXN3-229ENST00000554672 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.16□□□□□ -1.1
ATXN3-229ENST00000554672 YEATS2Q9ULM3 1422 aa8.16□□□□□ -1.1
ATXN3-229ENST00000554672 FANCAO15360 1455 aa8.15□□□□□ -1.1
ATXN3-229ENST00000554672 ACTN4O43707 911 aaKnown RBP8.15□□□□□ -1.1
ATXN3-229ENST00000554672 CFHP08603 1231 aa8.15□□□□□ -1.1
ATXN3-229ENST00000554672 CEBPAP49715 358 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-229ENST00000554672 PHOX2BQ99453 314 aa8.15□□□□□ -1.1
ATXN3-229ENST00000554672 PRR14Q9BWN1 585 aa8.15□□□□□ -1.1
ATXN3-229ENST00000554672 PRKD2Q9BZL6 878 aa8.15□□□□□ -1.1
ATXN3-229ENST00000554672 MAGI2Q86UL8 1455 aa8.14□□□□□ -1.11
ATXN3-229ENST00000554672 NLRP7Q8WX94 980 aa8.14□□□□□ -1.11
ATXN3-229ENST00000554672 TLL1O43897 1013 aa8.12□□□□□ -1.11
ATXN3-229ENST00000554672 EFCAB2Q5VUJ9 269 aa8.12□□□□□ -1.11
ATXN3-229ENST00000554672 FRMPD1Q5SYB0 1578 aa8.12□□□□□ -1.11
ATXN3-229ENST00000554672 SCAPERQ9BY12 1400 aa8.12□□□□□ -1.11
ATXN3-229ENST00000554672 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-229ENST00000554672 KMT5BQ4FZB7 885 aa8.11□□□□□ -1.11
ATXN3-229ENST00000554672 GPIHBP1Q8IV16 184 aa8.11□□□□□ -1.11
ATXN3-229ENST00000554672 EMID1Q96A84 441 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-229ENST00000554672 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
ATXN3-229ENST00000554672 ATP10AO60312 1499 aa8.11□□□□□ -1.11
ATXN3-229ENST00000554672 NUP153P49790 1475 aaKnown RBP8.11□□□□□ -1.11
ATXN3-229ENST00000554672 TMUB1Q9BVT8 246 aa8.1□□□□□ -1.11
ATXN3-229ENST00000554672 DAXXQ9UER7 740 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-229ENST00000554672 V9GY48 417 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms