RNA–Protein interactions for RNA: ENST00000554035.5

RDH11-206, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-206ENST00000554035 KNDC1Q76NI1 1749 aa12.33□□□□□ -0.44
RDH11-206ENST00000554035 METP08581 1390 aa12.31□□□□□ -0.44
RDH11-206ENST00000554035 FAM135BQ49AJ0 1406 aa12.31□□□□□ -0.44
RDH11-206ENST00000554035 YTHDC1Q96MU7 727 aaKnown RBP12.31□□□□□ -0.44
RDH11-206ENST00000554035 TBX22Q9Y458 520 aa12.31□□□□□ -0.44
RDH11-206ENST00000554035 CPS1P31327 1500 aa12.31□□□□□ -0.44
RDH11-206ENST00000554035 POLR3GLQ9BT43 218 aa12.3□□□□□ -0.44
RDH11-206ENST00000554035 PRKRIP1Q9H875 184 aaPredicted RBP12.29□□□□□ -0.44
RDH11-206ENST00000554035 STK26Q9P289 416 aa12.29□□□□□ -0.44
RDH11-206ENST00000554035 EVC2Q86UK5 1308 aa12.29□□□□□ -0.44
RDH11-206ENST00000554035 PIK3R4Q99570 1358 aa12.29□□□□□ -0.44
RDH11-206ENST00000554035 MYOM1P52179 1685 aa12.29□□□□□ -0.44
RDH11-206ENST00000554035 TULP4Q9NRJ4 1543 aa12.28□□□□□ -0.44
RDH11-206ENST00000554035 ANKLE2Q86XL3 938 aa12.28□□□□□ -0.44
RDH11-206ENST00000554035 PRAM1Q96QH2 718 aa12.28□□□□□ -0.44
RDH11-206ENST00000554035 CAPN15O75808 1086 aa12.27□□□□□ -0.45
RDH11-206ENST00000554035 BCANQ96GW7 911 aa12.27□□□□□ -0.45
RDH11-206ENST00000554035 KTN1Q86UP2 1357 aaKnown RBP12.27□□□□□ -0.45
RDH11-206ENST00000554035 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
RDH11-206ENST00000554035 POGKQ9P215 609 aa12.26□□□□□ -0.45
RDH11-206ENST00000554035 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
RDH11-206ENST00000554035 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
RDH11-206ENST00000554035 PTPRUQ92729 1446 aa12.25□□□□□ -0.45
RDH11-206ENST00000554035 PTCH1Q13635 1447 aa12.24□□□□□ -0.45
RDH11-206ENST00000554035 PANK3Q9H999 370 aa12.24□□□□□ -0.45
RDH11-206ENST00000554035 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
RDH11-206ENST00000554035 XRN1Q8IZH2 1706 aaKnown RBP12.23□□□□□ -0.45
RDH11-206ENST00000554035 ATAD2Q6PL18 1390 aa12.23□□□□□ -0.45
RDH11-206ENST00000554035 NPC1L1Q9UHC9 1359 aa12.23□□□□□ -0.45
RDH11-206ENST00000554035 SLC4A2P04920 1241 aa12.23□□□□□ -0.45
RDH11-206ENST00000554035 SLC26A8Q96RN1 970 aa12.23□□□□□ -0.45
RDH11-206ENST00000554035 ADGRB2O60241 1585 aa12.22□□□□□ -0.45
RDH11-206ENST00000554035 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
RDH11-206ENST00000554035 ROBO2Q9HCK4 1378 aa12.22□□□□□ -0.45
RDH11-206ENST00000554035 PLEKHH1Q9ULM0 1364 aa12.22□□□□□ -0.45
RDH11-206ENST00000554035 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
RDH11-206ENST00000554035 DSG3P32926 999 aa12.22□□□□□ -0.45
RDH11-206ENST00000554035 RALBP1Q15311 655 aa12.21□□□□□ -0.45
RDH11-206ENST00000554035 WAPLQ7Z5K2 1190 aa12.21□□□□□ -0.45
RDH11-206ENST00000554035 SAFB2Q14151 953 aaKnown RBP eCLIP12.2□□□□□ -0.46
RDH11-206ENST00000554035 AMOTL2Q9Y2J4 779 aa12.2□□□□□ -0.46
RDH11-206ENST00000554035 PARD3Q8TEW0 1356 aa12.19□□□□□ -0.46
RDH11-206ENST00000554035 CDK19Q9BWU1 502 aa12.19□□□□□ -0.46
RDH11-206ENST00000554035 KNSTRNQ9Y448 316 aa12.19□□□□□ -0.46
RDH11-206ENST00000554035 ANKRD36BQ8N2N9 1353 aa12.18□□□□□ -0.46
RDH11-206ENST00000554035 CHD2O14647 1828 aaKnown RBP12.18□□□□□ -0.46
RDH11-206ENST00000554035 WASLO00401 505 aaPredicted RBP12.18□□□□□ -0.46
RDH11-206ENST00000554035 SRPK2P78362 688 aaKnown RBP12.18□□□□□ -0.46
RDH11-206ENST00000554035 AMER1Q5JTC6 1135 aaPredicted RBP12.18□□□□□ -0.46
RDH11-206ENST00000554035 CABP2Q9NPB3 220 aa12.18□□□□□ -0.46
RDH11-206ENST00000554035 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
RDH11-206ENST00000554035 USP32Q8NFA0 1604 aa12.18□□□□□ -0.46
RDH11-206ENST00000554035 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.17□□□□□ -0.46
RDH11-206ENST00000554035 SLC12A5Q9H2X9 1139 aa12.17□□□□□ -0.46
RDH11-206ENST00000554035 MYBBP1AQ9BQG0 1328 aaKnown RBP12.16□□□□□ -0.46
RDH11-206ENST00000554035 NCKAP5LQ9HCH0 1330 aa12.16□□□□□ -0.46
RDH11-206ENST00000554035 CARD14Q9BXL6 1004 aa12.16□□□□□ -0.46
RDH11-206ENST00000554035 NWD1Q149M9 1564 aa12.16□□□□□ -0.46
RDH11-206ENST00000554035 ATP7BP35670 1465 aa12.15□□□□□ -0.46
RDH11-206ENST00000554035 LMTK3Q96Q04 1460 aa12.15□□□□□ -0.46
RDH11-206ENST00000554035 TMC1Q8TDI8 760 aa12.15□□□□□ -0.46
RDH11-206ENST00000554035 KCNA6P17658 529 aa12.14□□□□□ -0.47
RDH11-206ENST00000554035 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
RDH11-206ENST00000554035 TERF2IPQ9NYB0 399 aa12.14□□□□□ -0.47
RDH11-206ENST00000554035 BRD4O60885 1362 aaPredicted RBP12.14□□□□□ -0.47
RDH11-206ENST00000554035 CD163L1Q9NR16 1453 aa12.14□□□□□ -0.47
RDH11-206ENST00000554035 NSD3Q9BZ95 1437 aa12.13□□□□□ -0.47
RDH11-206ENST00000554035 NSD2O96028 1365 aa12.13□□□□□ -0.47
RDH11-206ENST00000554035 CCDC184Q52MB2 194 aa12.12□□□□□ -0.47
RDH11-206ENST00000554035 NLRP13Q86W25 1043 aa12.12□□□□□ -0.47
RDH11-206ENST00000554035 A0A1W2PP64 1363 aa12.12□□□□□ -0.47
RDH11-206ENST00000554035 CPSF1Q10570 1443 aaKnown RBP12.11□□□□□ -0.47
RDH11-206ENST00000554035 TOPAZ1Q8N9V7 1692 aa12.11□□□□□ -0.47
RDH11-206ENST00000554035 NKTRP30414 1462 aaKnown RBP12.11□□□□□ -0.47
RDH11-206ENST00000554035 CC2D1BQ5T0F9 858 aaKnown RBP12.11□□□□□ -0.47
RDH11-206ENST00000554035 HDGFL2Q7Z4V5 671 aaPredicted RBP12.11□□□□□ -0.47
RDH11-206ENST00000554035 NUDT16Q96DE0 195 aaKnown RBP12.11□□□□□ -0.47
RDH11-206ENST00000554035 CCDC61Q9Y6R9 512 aa12.11□□□□□ -0.47
RDH11-206ENST00000554035 ANKARQ7Z5J8 1434 aa12.11□□□□□ -0.47
RDH11-206ENST00000554035 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
RDH11-206ENST00000554035 CDC42BPGQ6DT37 1551 aa12.1□□□□□ -0.47
RDH11-206ENST00000554035 INSRP06213 1382 aa12.1□□□□□ -0.47
RDH11-206ENST00000554035 CABP1Q9NZU7 370 aa12.1□□□□□ -0.47
RDH11-206ENST00000554035 PPIP5K1Q6PFW1 1433 aa12.1□□□□□ -0.47
RDH11-206ENST00000554035 PRR36Q9H6K5 1346 aa12.1□□□□□ -0.47
RDH11-206ENST00000554035 PLEKHG3A1L390 1219 aa12.09□□□□□ -0.47
RDH11-206ENST00000554035 STRCQ7RTU9 1775 aa12.08□□□□□ -0.48
RDH11-206ENST00000554035 PNISRQ8TF01 805 aaKnown RBP12.08□□□□□ -0.48
RDH11-206ENST00000554035 ADGRL3Q9HAR2 1447 aa12.08□□□□□ -0.48
RDH11-206ENST00000554035 ITSN1Q15811 1721 aa12.08□□□□□ -0.48
RDH11-206ENST00000554035 FMN2Q9NZ56 1722 aa12.08□□□□□ -0.48
RDH11-206ENST00000554035 PPP2R1AP30153 589 aa12.07□□□□□ -0.48
RDH11-206ENST00000554035 HSPA2P54652 639 aa12.07□□□□□ -0.48
RDH11-206ENST00000554035 HNRNPUQ00839 825 aaKnown RBP eCLIP12.07□□□□□ -0.48
RDH11-206ENST00000554035 EDC4Q6P2E9 1401 aaKnown RBP12.07□□□□□ -0.48
RDH11-206ENST00000554035 NALCNQ8IZF0 1738 aa12.07□□□□□ -0.48
RDH11-206ENST00000554035 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
RDH11-206ENST00000554035 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
RDH11-206ENST00000554035 AKAP12Q02952 1782 aa12.07□□□□□ -0.48
RDH11-206ENST00000554035 ZBED9Q6R2W3 1325 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms