RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 TSR3Q9UJK0 312 aaKnown RBP7.1□□□□□ -1.27
EFCAB11-204ENST00000553871 ACTN4O43707 911 aaKnown RBP7.09□□□□□ -1.27
EFCAB11-204ENST00000553871 RTL5Q5HYW3 569 aaPredicted RBP7.09□□□□□ -1.27
EFCAB11-204ENST00000553871 HELBQ8NG08 1087 aaPredicted RBP7.09□□□□□ -1.27
EFCAB11-204ENST00000553871 PCDHGC3Q9UN70 934 aa7.09□□□□□ -1.27
EFCAB11-204ENST00000553871 Q3C1V9 767 aa7.08□□□□□ -1.28
EFCAB11-204ENST00000553871 PUS10Q3MIT2 529 aaKnown RBP7.08□□□□□ -1.28
EFCAB11-204ENST00000553871 PRM3Q9NNZ6 103 aa7.08□□□□□ -1.28
EFCAB11-204ENST00000553871 USP17L8P0C7I0 530 aa7.07□□□□□ -1.28
EFCAB11-204ENST00000553871 FBXO31Q5XUX0 539 aaPredicted RBP7.07□□□□□ -1.28
EFCAB11-204ENST00000553871 CLUAP1Q96AJ1 413 aa7.07□□□□□ -1.28
EFCAB11-204ENST00000553871 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
EFCAB11-204ENST00000553871 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
EFCAB11-204ENST00000553871 SNRKQ9NRH2 765 aa7.07□□□□□ -1.28
EFCAB11-204ENST00000553871 PCDH10Q9P2E7 1040 aa7.07□□□□□ -1.28
EFCAB11-204ENST00000553871 PCDHB3Q9Y5E6 796 aa7.07□□□□□ -1.28
EFCAB11-204ENST00000553871 MORN1Q5T089 497 aa7.06□□□□□ -1.28
EFCAB11-204ENST00000553871 KCTD12Q96CX2 325 aaKnown RBP7.06□□□□□ -1.28
EFCAB11-204ENST00000553871 A6NJR5 290 aa7.05□□□□□ -1.28
EFCAB11-204ENST00000553871 NR1I2O75469 434 aa7.05□□□□□ -1.28
EFCAB11-204ENST00000553871 APLP1P51693 650 aa7.05□□□□□ -1.28
EFCAB11-204ENST00000553871 SLC27A5Q9Y2P5 690 aa7.05□□□□□ -1.28
EFCAB11-204ENST00000553871 THSD4Q6ZMP0 1018 aa7.04□□□□□ -1.28
EFCAB11-204ENST00000553871 PROSER2Q86WR7 435 aaPredicted RBP7.04□□□□□ -1.28
EFCAB11-204ENST00000553871 WWC1Q8IX03 1113 aa7.04□□□□□ -1.28
EFCAB11-204ENST00000553871 SYMPKQ92797 1274 aaKnown RBP7.04□□□□□ -1.28
EFCAB11-204ENST00000553871 WBP1LQ9NX94 342 aa7.04□□□□□ -1.28
EFCAB11-204ENST00000553871 RETREG3Q86VR2 466 aa7.03□□□□□ -1.28
EFCAB11-204ENST00000553871 MTMR14Q8NCE2 650 aa7.03□□□□□ -1.28
EFCAB11-204ENST00000553871 PRR7Q8TB68 274 aa7.03□□□□□ -1.28
EFCAB11-204ENST00000553871 CFAP99D6REC4 459 aa7.02□□□□□ -1.29
EFCAB11-204ENST00000553871 POM121Q96HA1 1249 aa7.02□□□□□ -1.29
EFCAB11-204ENST00000553871 SOCS7O14512 581 aa7.01□□□□□ -1.29
EFCAB11-204ENST00000553871 FMNL1O95466 1100 aaPredicted RBP7.01□□□□□ -1.29
EFCAB11-204ENST00000553871 CTDSPL2Q05D32 466 aa7.01□□□□□ -1.29
EFCAB11-204ENST00000553871 BLOC1S3Q6QNY0 202 aa7.01□□□□□ -1.29
EFCAB11-204ENST00000553871 NYAP1Q6ZVC0 841 aa7.01□□□□□ -1.29
EFCAB11-204ENST00000553871 COG6Q9Y2V7 657 aa7.01□□□□□ -1.29
EFCAB11-204ENST00000553871 TRAK2O60296 914 aa7□□□□□ -1.29
EFCAB11-204ENST00000553871 ABL2P42684 1182 aa7□□□□□ -1.29
EFCAB11-204ENST00000553871 PTPN5P54829 565 aa7□□□□□ -1.29
EFCAB11-204ENST00000553871 COPS2P61201 443 aa7□□□□□ -1.29
EFCAB11-204ENST00000553871 RNF19BQ6ZMZ0 732 aa7□□□□□ -1.29
EFCAB11-204ENST00000553871 SCUBE3Q8IX30 993 aa7□□□□□ -1.29
EFCAB11-204ENST00000553871 USB1Q9BQ65 265 aaKnown RBP7□□□□□ -1.29
EFCAB11-204ENST00000553871 GDPD2Q9HCC8 539 aa7□□□□□ -1.29
EFCAB11-204ENST00000553871 NDUFB9Q9Y6M9 179 aa7□□□□□ -1.29
EFCAB11-204ENST00000553871 ARID3CA6NKF2 412 aa6.98□□□□□ -1.29
EFCAB11-204ENST00000553871 BRICD5Q6PL45 260 aa6.98□□□□□ -1.29
EFCAB11-204ENST00000553871 PNMA1Q8ND90 353 aa6.98□□□□□ -1.29
EFCAB11-204ENST00000553871 LRRN4Q8WUT4 740 aa6.98□□□□□ -1.29
EFCAB11-204ENST00000553871 TBC1D2BQ9UPU7 963 aa6.98□□□□□ -1.29
EFCAB11-204ENST00000553871 SALL2Q9Y467 1007 aaPredicted RBP6.98□□□□□ -1.29
EFCAB11-204ENST00000553871 DESI1Q6ICB0 168 aa6.97□□□□□ -1.29
EFCAB11-204ENST00000553871 ARID3AQ99856 593 aa6.97□□□□□ -1.29
EFCAB11-204ENST00000553871 HMX1Q9NP08 348 aaPredicted RBP6.97□□□□□ -1.29
EFCAB11-204ENST00000553871 MYT1LQ9UL68 1186 aa6.97□□□□□ -1.29
EFCAB11-204ENST00000553871 ZNF330Q9Y3S2 320 aaPredicted RBP6.97□□□□□ -1.29
EFCAB11-204ENST00000553871 SPSB2Q99619 263 aa6.96□□□□□ -1.3
EFCAB11-204ENST00000553871 JUNDP17535 347 aa6.95□□□□□ -1.3
EFCAB11-204ENST00000553871 GJD4Q96KN9 370 aaPredicted RBP6.95□□□□□ -1.3
EFCAB11-204ENST00000553871 ZNF777Q9ULD5 760 aaPredicted RBP6.95□□□□□ -1.3
EFCAB11-204ENST00000553871 PER1O15534 1290 aaPredicted RBP6.94□□□□□ -1.3
EFCAB11-204ENST00000553871 LYPD8Q6UX82 237 aa6.94□□□□□ -1.3
EFCAB11-204ENST00000553871 FNBP4Q8N3X1 1017 aaPredicted RBP6.94□□□□□ -1.3
EFCAB11-204ENST00000553871 THAP11Q96EK4 314 aa6.94□□□□□ -1.3
EFCAB11-204ENST00000553871 MTRQ99707 1265 aa6.94□□□□□ -1.3
EFCAB11-204ENST00000553871 TLL1O43897 1013 aa6.93□□□□□ -1.3
EFCAB11-204ENST00000553871 ZPR1O75312 459 aa6.93□□□□□ -1.3
EFCAB11-204ENST00000553871 NR6A1Q15406 480 aa6.93□□□□□ -1.3
EFCAB11-204ENST00000553871 MSS51Q4VC12 460 aa6.93□□□□□ -1.3
EFCAB11-204ENST00000553871 CCDC97Q96F63 343 aaPredicted RBP6.93□□□□□ -1.3
EFCAB11-204ENST00000553871 TRIM34Q9BYJ4 488 aa6.93□□□□□ -1.3
EFCAB11-204ENST00000553871 IL21Q9HBE4 155 aa6.93□□□□□ -1.3
EFCAB11-204ENST00000553871 ADH1BP00325 375 aa6.92□□□□□ -1.3
EFCAB11-204ENST00000553871 CTHP32929 405 aa6.92□□□□□ -1.3
EFCAB11-204ENST00000553871 PTPRNQ16849 979 aa6.92□□□□□ -1.3
EFCAB11-204ENST00000553871 WASHC4Q2M389 1173 aa6.92□□□□□ -1.3
EFCAB11-204ENST00000553871 ARXQ96QS3 562 aa6.92□□□□□ -1.3
EFCAB11-204ENST00000553871 C1orf115Q9H7X2 142 aa6.92□□□□□ -1.3
EFCAB11-204ENST00000553871 CCDC82Q8N4S0 544 aa6.91□□□□□ -1.3
EFCAB11-204ENST00000553871 EPS8L1Q8TE68 723 aa6.91□□□□□ -1.3
EFCAB11-204ENST00000553871 NUDT12Q9BQG2 462 aa6.91□□□□□ -1.3
EFCAB11-204ENST00000553871 DXOO77932 396 aaKnown RBP6.9□□□□□ -1.3
EFCAB11-204ENST00000553871 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.3
EFCAB11-204ENST00000553871 SPNS2Q8IVW8 549 aa6.9□□□□□ -1.3
EFCAB11-204ENST00000553871 HOMEZQ8IX15 550 aa6.9□□□□□ -1.3
EFCAB11-204ENST00000553871 PRDM9Q9NQV7 894 aa6.9□□□□□ -1.3
EFCAB11-204ENST00000553871 CCDC24Q8N4L8 307 aa6.89□□□□□ -1.31
EFCAB11-204ENST00000553871 FAM160A2Q8N612 972 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-204ENST00000553871 RNF166Q96A37 237 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-204ENST00000553871 CALR3Q96L12 384 aaKnown RBP6.89□□□□□ -1.31
EFCAB11-204ENST00000553871 SLC6A16Q9GZN6 736 aa6.89□□□□□ -1.31
EFCAB11-204ENST00000553871 MAP10Q9P2G4 905 aa6.89□□□□□ -1.31
EFCAB11-204ENST00000553871 HCSTQ9UBK5 93 aa6.89□□□□□ -1.31
EFCAB11-204ENST00000553871 IRF5Q13568 498 aa6.88□□□□□ -1.31
EFCAB11-204ENST00000553871 TJAP1Q5JTD0 557 aa6.88□□□□□ -1.31
EFCAB11-204ENST00000553871 ZNF516Q92618 1163 aa6.88□□□□□ -1.31
EFCAB11-204ENST00000553871 SERPINA10Q9UK55 444 aa6.88□□□□□ -1.31
EFCAB11-204ENST00000553871 POM121CA8CG34 1229 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms