RNA–Protein interactions for RNA: ENST00000553615.5

FCF1-203, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-203ENST00000553615 ZMYND15Q9H091 742 aa9.56□□□□□ -0.88
FCF1-203ENST00000553615 ACTN4O43707 911 aaKnown RBP9.55□□□□□ -0.88
FCF1-203ENST00000553615 PDE4CQ08493 712 aa9.55□□□□□ -0.88
FCF1-203ENST00000553615 DIXDC1Q155Q3 683 aa9.55□□□□□ -0.88
FCF1-203ENST00000553615 KDM4AO75164 1064 aa9.54□□□□□ -0.88
FCF1-203ENST00000553615 FAM117AQ9C073 453 aa9.54□□□□□ -0.88
FCF1-203ENST00000553615 EEA1Q15075 1411 aa9.54□□□□□ -0.88
FCF1-203ENST00000553615 ABCC9O60706 1549 aa9.53□□□□□ -0.88
FCF1-203ENST00000553615 PDIA4P13667 645 aaKnown RBP9.53□□□□□ -0.88
FCF1-203ENST00000553615 USP46P62068 366 aa9.53□□□□□ -0.88
FCF1-203ENST00000553615 FGD1P98174 961 aa9.53□□□□□ -0.88
FCF1-203ENST00000553615 GRIPAP1Q4V328 841 aa9.53□□□□□ -0.88
FCF1-203ENST00000553615 FAM43AQ8N2R8 423 aa9.52□□□□□ -0.89
FCF1-203ENST00000553615 PCDHB3Q9Y5E6 796 aa9.52□□□□□ -0.89
FCF1-203ENST00000553615 RRP9O43818 475 aaKnown RBP9.51□□□□□ -0.89
FCF1-203ENST00000553615 ATP6V1AP38606 617 aa9.51□□□□□ -0.89
FCF1-203ENST00000553615 FUT2Q10981 343 aa9.51□□□□□ -0.89
FCF1-203ENST00000553615 SPIRE2Q8WWL2 714 aa9.51□□□□□ -0.89
FCF1-203ENST00000553615 TBC1D2Q9BYX2 928 aa9.5□□□□□ -0.89
FCF1-203ENST00000553615 ANP32AP39687 249 aaKnown RBP9.49□□□□□ -0.89
FCF1-203ENST00000553615 HOXA2O43364 376 aa9.48□□□□□ -0.89
FCF1-203ENST00000553615 AAMPQ13685 434 aa9.48□□□□□ -0.89
FCF1-203ENST00000553615 PLEKHG3A1L390 1219 aa9.47□□□□□ -0.89
FCF1-203ENST00000553615 NR1I2O75469 434 aa9.47□□□□□ -0.89
FCF1-203ENST00000553615 PUS10Q3MIT2 529 aaKnown RBP9.47□□□□□ -0.89
FCF1-203ENST00000553615 ZNF326Q5BKZ1 582 aaKnown RBP9.47□□□□□ -0.89
FCF1-203ENST00000553615 TAF7LQ5H9L4 462 aa9.47□□□□□ -0.89
FCF1-203ENST00000553615 CCER2I3L3R5 266 aa9.46□□□□□ -0.9
FCF1-203ENST00000553615 COPS2P61201 443 aa9.46□□□□□ -0.9
FCF1-203ENST00000553615 MORN1Q5T089 497 aa9.46□□□□□ -0.9
FCF1-203ENST00000553615 BLOC1S3Q6QNY0 202 aa9.46□□□□□ -0.9
FCF1-203ENST00000553615 MTRQ99707 1265 aa9.46□□□□□ -0.9
FCF1-203ENST00000553615 PPM1GO15355 546 aaPredicted RBP9.45□□□□□ -0.9
FCF1-203ENST00000553615 IPO9Q96P70 1041 aaKnown RBP9.45□□□□□ -0.9
FCF1-203ENST00000553615 IL21Q9HBE4 155 aa9.45□□□□□ -0.9
FCF1-203ENST00000553615 RB1CC1Q8TDY2 1594 aa9.45□□□□□ -0.9
FCF1-203ENST00000553615 MOXD2PA6NHM9 499 aa9.44□□□□□ -0.9
FCF1-203ENST00000553615 TJAP1Q5JTD0 557 aa9.44□□□□□ -0.9
FCF1-203ENST00000553615 MYSM1Q5VVJ2 828 aa9.44□□□□□ -0.9
FCF1-203ENST00000553615 FDX1P10109 184 aa9.43□□□□□ -0.9
FCF1-203ENST00000553615 NDUFV2P19404 249 aa9.43□□□□□ -0.9
FCF1-203ENST00000553615 GJA5P36382 358 aa9.43□□□□□ -0.9
FCF1-203ENST00000553615 SH3D19Q5HYK7 790 aa9.43□□□□□ -0.9
FCF1-203ENST00000553615 RIC3Q7Z5B4 369 aa9.43□□□□□ -0.9
FCF1-203ENST00000553615 SCUBE3Q8IX30 993 aa9.43□□□□□ -0.9
FCF1-203ENST00000553615 PPP4R2Q9NY27 417 aa9.43□□□□□ -0.9
FCF1-203ENST00000553615 SLC27A5Q9Y2P5 690 aa9.43□□□□□ -0.9
FCF1-203ENST00000553615 CENPJQ9HC77 1338 aaPredicted RBP9.42□□□□□ -0.9
FCF1-203ENST00000553615 ZPR1O75312 459 aa9.42□□□□□ -0.9
FCF1-203ENST00000553615 KCNC4Q03721 635 aa9.42□□□□□ -0.9
FCF1-203ENST00000553615 SKIV2LQ15477 1246 aaKnown RBP9.42□□□□□ -0.9
FCF1-203ENST00000553615 Q3C1V9 767 aa9.42□□□□□ -0.9
FCF1-203ENST00000553615 RSBN1LQ6PCB5 846 aaPredicted RBP9.42□□□□□ -0.9
FCF1-203ENST00000553615 HLA-CQ95604 372 aa9.42□□□□□ -0.9
FCF1-203ENST00000553615 GOPCQ9HD26 462 aa9.42□□□□□ -0.9
FCF1-203ENST00000553615 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
FCF1-203ENST00000553615 NACADO15069 1562 aa9.41□□□□□ -0.9
FCF1-203ENST00000553615 SPTLC1O15269 473 aa9.41□□□□□ -0.9
FCF1-203ENST00000553615 ITGBL1O95965 494 aaPredicted RBP9.41□□□□□ -0.9
FCF1-203ENST00000553615 NEFMP07197 916 aa9.41□□□□□ -0.9
FCF1-203ENST00000553615 CLK2P49760 499 aaKnown RBP9.41□□□□□ -0.9
FCF1-203ENST00000553615 ATP1B4Q9UN42 357 aaPredicted RBP9.41□□□□□ -0.9
FCF1-203ENST00000553615 RBM10P98175 930 aaKnown RBP9.4□□□□□ -0.9
FCF1-203ENST00000553615 GUCA2AQ02747 115 aa9.4□□□□□ -0.9
FCF1-203ENST00000553615 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
FCF1-203ENST00000553615 ZNF516Q92618 1163 aa9.39□□□□□ -0.91
FCF1-203ENST00000553615 PCMTD1Q96MG8 357 aaPredicted RBP9.39□□□□□ -0.91
FCF1-203ENST00000553615 ITGAEP38570 1179 aa9.38□□□□□ -0.91
FCF1-203ENST00000553615 HSP90AA2PQ14568 343 aaPredicted RBP9.38□□□□□ -0.91
FCF1-203ENST00000553615 TUSC1Q2TAM9 212 aa9.38□□□□□ -0.91
FCF1-203ENST00000553615 LIMD1Q9UGP4 676 aa9.38□□□□□ -0.91
FCF1-203ENST00000553615 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
FCF1-203ENST00000553615 C6orf229H3BNL8 230 aa9.37□□□□□ -0.91
FCF1-203ENST00000553615 CALD1Q05682 793 aaKnown RBP9.37□□□□□ -0.91
FCF1-203ENST00000553615 TMEM132AQ24JP5 1023 aa9.37□□□□□ -0.91
FCF1-203ENST00000553615 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
FCF1-203ENST00000553615 BRICD5Q6PL45 260 aa9.36□□□□□ -0.91
FCF1-203ENST00000553615 SPSB2Q99619 263 aa9.36□□□□□ -0.91
FCF1-203ENST00000553615 ZBTB3Q9H5J0 574 aa9.36□□□□□ -0.91
FCF1-203ENST00000553615 PLA2G2EQ9NZK7 142 aa9.36□□□□□ -0.91
FCF1-203ENST00000553615 CEP162Q5TB80 1403 aa9.36□□□□□ -0.91
FCF1-203ENST00000553615 SPDYE5A6NIY4 337 aa9.35□□□□□ -0.91
FCF1-203ENST00000553615 TLL1O43897 1013 aa9.35□□□□□ -0.91
FCF1-203ENST00000553615 MTMR2Q13614 643 aa9.35□□□□□ -0.91
FCF1-203ENST00000553615 IFFO2Q5TF58 517 aa9.35□□□□□ -0.91
FCF1-203ENST00000553615 PRPF38BQ5VTL8 546 aaKnown RBP9.35□□□□□ -0.91
FCF1-203ENST00000553615 RNF19BQ6ZMZ0 732 aa9.35□□□□□ -0.91
FCF1-203ENST00000553615 THAP11Q96EK4 314 aa9.35□□□□□ -0.91
FCF1-203ENST00000553615 PCDHB15Q9Y5E8 787 aa9.35□□□□□ -0.91
FCF1-203ENST00000553615 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
FCF1-203ENST00000553615 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
FCF1-203ENST00000553615 ADH1BP00325 375 aa9.34□□□□□ -0.91
FCF1-203ENST00000553615 NCLP19338 710 aaKnown RBP9.34□□□□□ -0.91
FCF1-203ENST00000553615 NUTM2DQ5VT03 806 aaPredicted RBP9.34□□□□□ -0.91
FCF1-203ENST00000553615 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
FCF1-203ENST00000553615 PROCA1Q8NCQ7 364 aaPredicted RBP9.34□□□□□ -0.91
FCF1-203ENST00000553615 USB1Q9BQ65 265 aaKnown RBP9.34□□□□□ -0.91
FCF1-203ENST00000553615 TNIKQ9UKE5 1360 aa9.34□□□□□ -0.91
FCF1-203ENST00000553615 NCAPD3P42695 1498 aa9.34□□□□□ -0.91
FCF1-203ENST00000553615 HSP90AA1P07900 732 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 301.4 ms