RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 USP47Q96K76 1375 aa21.09■□□□□ 0.97
MTHFD1-204ENST00000553405 CENPJQ9HC77 1338 aaPredicted RBP21.08■□□□□ 0.97
MTHFD1-204ENST00000553405 C19orf44Q9H6X5 657 aa21.08■□□□□ 0.97
MTHFD1-204ENST00000553405 SBNO2Q9Y2G9 1366 aa21.08■□□□□ 0.96
MTHFD1-204ENST00000553405 SAFB2Q14151 953 aaKnown RBP eCLIP21.07■□□□□ 0.96
MTHFD1-204ENST00000553405 POGKQ9P215 609 aa21.06■□□□□ 0.96
MTHFD1-204ENST00000553405 MSH6P52701 1360 aa21.06■□□□□ 0.96
MTHFD1-204ENST00000553405 EIF3AQ14152 1382 aaKnown RBP21.06■□□□□ 0.96
MTHFD1-204ENST00000553405 TULP4Q9NRJ4 1543 aa21.05■□□□□ 0.96
MTHFD1-204ENST00000553405 FMN2Q9NZ56 1722 aa21.05■□□□□ 0.96
MTHFD1-204ENST00000553405 TESK2Q96S53 571 aa21.05■□□□□ 0.96
MTHFD1-204ENST00000553405 MST1RQ04912 1400 aa21.04■□□□□ 0.96
MTHFD1-204ENST00000553405 USP32Q8NFA0 1604 aa21.03■□□□□ 0.96
MTHFD1-204ENST00000553405 MINK1Q8N4C8 1332 aaPredicted RBP21.03■□□□□ 0.96
MTHFD1-204ENST00000553405 ST20-MTHFSA0A0A6YYL1 179 aa21.02■□□□□ 0.96
MTHFD1-204ENST00000553405 HIRIP3Q9BW71 556 aaPredicted RBP21.01■□□□□ 0.95
MTHFD1-204ENST00000553405 ZEB1P37275 1124 aaPredicted RBP21■□□□□ 0.95
MTHFD1-204ENST00000553405 C14orf37Q86TY3 774 aa21■□□□□ 0.95
MTHFD1-204ENST00000553405 CADPS2Q86UW7 1296 aa20.99■□□□□ 0.95
MTHFD1-204ENST00000553405 WASLO00401 505 aaPredicted RBP20.98■□□□□ 0.95
MTHFD1-204ENST00000553405 C1orf167Q5SNV9 1468 aa20.98■□□□□ 0.95
MTHFD1-204ENST00000553405 ATP7BP35670 1465 aa20.97■□□□□ 0.95
MTHFD1-204ENST00000553405 HSPA5P11021 654 aaKnown RBP20.97■□□□□ 0.95
MTHFD1-204ENST00000553405 PRR36Q9H6K5 1346 aa20.97■□□□□ 0.95
MTHFD1-204ENST00000553405 ATF3P18847 181 aa20.96■□□□□ 0.95
MTHFD1-204ENST00000553405 ANKARQ7Z5J8 1434 aa20.95■□□□□ 0.95
MTHFD1-204ENST00000553405 EIF4G2P78344 907 aaKnown RBP eCLIP20.95■□□□□ 0.94
MTHFD1-204ENST00000553405 SLAIN2Q9P270 581 aa20.95■□□□□ 0.94
MTHFD1-204ENST00000553405 TOPAZ1Q8N9V7 1692 aa20.95■□□□□ 0.94
MTHFD1-204ENST00000553405 RGPD8O14715 1765 aaPredicted RBP20.95■□□□□ 0.94
MTHFD1-204ENST00000553405 UBAP1LF5GYI3 381 aa20.94■□□□□ 0.94
MTHFD1-204ENST00000553405 CDK19Q9BWU1 502 aa20.93■□□□□ 0.94
MTHFD1-204ENST00000553405 DISP3Q9P2K9 1392 aa20.93■□□□□ 0.94
MTHFD1-204ENST00000553405 TOM1O60784 492 aa20.92■□□□□ 0.94
MTHFD1-204ENST00000553405 ROBO1Q9Y6N7 1651 aa20.92■□□□□ 0.94
MTHFD1-204ENST00000553405 EVC2Q86UK5 1308 aa20.9■□□□□ 0.94
MTHFD1-204ENST00000553405 BRINP3Q76B58 766 aa20.89■□□□□ 0.93
MTHFD1-204ENST00000553405 NUTM2FA1L443 756 aa20.88■□□□□ 0.93
MTHFD1-204ENST00000553405 NUDT16Q96DE0 195 aaKnown RBP20.88■□□□□ 0.93
MTHFD1-204ENST00000553405 ORAI2Q96SN7 254 aa20.88■□□□□ 0.93
MTHFD1-204ENST00000553405 CABP2Q9NPB3 220 aa20.88■□□□□ 0.93
MTHFD1-204ENST00000553405 PUS7Q96PZ0 661 aaKnown RBP20.87■□□□□ 0.93
MTHFD1-204ENST00000553405 ITSN1Q15811 1721 aa20.87■□□□□ 0.93
MTHFD1-204ENST00000553405 NHSL1Q5SYE7 1610 aa20.86■□□□□ 0.93
MTHFD1-204ENST00000553405 C11orf95C9JLR9 678 aaPredicted RBP20.85■□□□□ 0.93
MTHFD1-204ENST00000553405 KIF1AQ12756 1690 aa20.85■□□□□ 0.93
MTHFD1-204ENST00000553405 AHDC1Q5TGY3 1603 aaPredicted RBP20.85■□□□□ 0.93
MTHFD1-204ENST00000553405 SLC24A1O60721 1099 aa20.84■□□□□ 0.93
MTHFD1-204ENST00000553405 FBXO41Q8TF61 875 aa20.84■□□□□ 0.93
MTHFD1-204ENST00000553405 SRPK2P78362 688 aaKnown RBP20.83■□□□□ 0.93
MTHFD1-204ENST00000553405 CCDC61Q9Y6R9 512 aa20.83■□□□□ 0.93
MTHFD1-204ENST00000553405 PLEKHG3A1L390 1219 aa20.82■□□□□ 0.92
MTHFD1-204ENST00000553405 PIP4K2BP78356 416 aa20.82■□□□□ 0.92
MTHFD1-204ENST00000553405 TMF1P82094 1093 aa20.82■□□□□ 0.92
MTHFD1-204ENST00000553405 MYOM1P52179 1685 aa20.82■□□□□ 0.92
MTHFD1-204ENST00000553405 ATAD2Q6PL18 1390 aa20.82■□□□□ 0.92
MTHFD1-204ENST00000553405 PPIP5K1Q6PFW1 1433 aa20.81■□□□□ 0.92
MTHFD1-204ENST00000553405 ESCO1Q5FWF5 840 aa20.81■□□□□ 0.92
MTHFD1-204ENST00000553405 PHF8Q9UPP1 1060 aa20.81■□□□□ 0.92
MTHFD1-204ENST00000553405 POLR3AO14802 1390 aaPredicted RBP20.81■□□□□ 0.92
MTHFD1-204ENST00000553405 CD163L1Q9NR16 1453 aa20.81■□□□□ 0.92
MTHFD1-204ENST00000553405 PXDNQ92626 1479 aa20.8■□□□□ 0.92
MTHFD1-204ENST00000553405 COL16A1Q07092 1604 aaPredicted RBP20.79■□□□□ 0.92
MTHFD1-204ENST00000553405 DDX17Q92841 729 aaKnown RBP20.78■□□□□ 0.92
MTHFD1-204ENST00000553405 CPSF1Q10570 1443 aaKnown RBP20.77■□□□□ 0.91
MTHFD1-204ENST00000553405 TRPM3Q9HCF6 1732 aaPredicted RBP20.76■□□□□ 0.91
MTHFD1-204ENST00000553405 PMFBP1Q8TBY8 1022 aa20.76■□□□□ 0.91
MTHFD1-204ENST00000553405 CABP1Q9NZU7 370 aa20.76■□□□□ 0.91
MTHFD1-204ENST00000553405 AKAP12Q02952 1782 aa20.76■□□□□ 0.91
MTHFD1-204ENST00000553405 SOS2Q07890 1332 aaPredicted RBP20.76■□□□□ 0.91
MTHFD1-204ENST00000553405 KIF7Q2M1P5 1343 aa20.76■□□□□ 0.91
MTHFD1-204ENST00000553405 NINLQ9Y2I6 1382 aa20.74■□□□□ 0.91
MTHFD1-204ENST00000553405 FOXO3O43524 673 aa20.74■□□□□ 0.91
MTHFD1-204ENST00000553405 PHLPP1O60346 1717 aa20.74■□□□□ 0.91
MTHFD1-204ENST00000553405 SSH2Q76I76 1423 aa20.74■□□□□ 0.91
MTHFD1-204ENST00000553405 ACEP12821 1306 aa20.74■□□□□ 0.91
MTHFD1-204ENST00000553405 WASHC2AQ641Q2 1341 aa20.74■□□□□ 0.91
MTHFD1-204ENST00000553405 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
MTHFD1-204ENST00000553405 CDCA8Q53HL2 280 aa20.73■□□□□ 0.91
MTHFD1-204ENST00000553405 SLC12A5Q9H2X9 1139 aa20.73■□□□□ 0.91
MTHFD1-204ENST00000553405 NPHP3Q7Z494 1330 aa20.73■□□□□ 0.91
MTHFD1-204ENST00000553405 MON2Q7Z3U7 1717 aa20.73■□□□□ 0.91
MTHFD1-204ENST00000553405 CCDC7Q96M83 1385 aa20.72■□□□□ 0.91
MTHFD1-204ENST00000553405 NRKQ7Z2Y5 1582 aa20.72■□□□□ 0.91
MTHFD1-204ENST00000553405 HSPA1LP34931 641 aa20.72■□□□□ 0.91
MTHFD1-204ENST00000553405 A0A1W2PP64 1363 aa20.7■□□□□ 0.9
MTHFD1-204ENST00000553405 USP6P35125 1406 aa20.7■□□□□ 0.9
MTHFD1-204ENST00000553405 ALS2Q96Q42 1657 aa20.69■□□□□ 0.9
MTHFD1-204ENST00000553405 XPCQ01831 940 aaPredicted RBP20.68■□□□□ 0.9
MTHFD1-204ENST00000553405 NGDNQ8NEJ9 315 aaKnown RBP20.68■□□□□ 0.9
MTHFD1-204ENST00000553405 SBNO1A3KN83 1393 aa20.68■□□□□ 0.9
MTHFD1-204ENST00000553405 KRT28Q7Z3Y7 464 aa20.67■□□□□ 0.9
MTHFD1-204ENST00000553405 ANKRD36BQ8N2N9 1353 aa20.67■□□□□ 0.9
MTHFD1-204ENST00000553405 TMC1Q8TDI8 760 aa20.66■□□□□ 0.9
MTHFD1-204ENST00000553405 BRD4O60885 1362 aaPredicted RBP20.65■□□□□ 0.9
MTHFD1-204ENST00000553405 ILDR1Q86SU0 546 aaPredicted RBP20.65■□□□□ 0.9
MTHFD1-204ENST00000553405 TNS3Q68CZ2 1445 aa20.64■□□□□ 0.89
MTHFD1-204ENST00000553405 SPATA31A3Q5VYP0 1347 aa20.64■□□□□ 0.89
MTHFD1-204ENST00000553405 PSME1Q06323 249 aa20.64■□□□□ 0.89
MTHFD1-204ENST00000553405 SHPRHQ149N8 1683 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms