RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
PPFIA2-228ENST00000553058 MAP3K7O43318 606 aa12.48□□□□□ -0.41
PPFIA2-228ENST00000553058 CDK11BP21127 795 aaKnown RBP12.48□□□□□ -0.41
PPFIA2-228ENST00000553058 CDK11AQ9UQ88 783 aaPredicted RBP12.48□□□□□ -0.41
PPFIA2-228ENST00000553058 ABCA8O94911 1581 aa12.47□□□□□ -0.41
PPFIA2-228ENST00000553058 VRTNQ9H8Y1 702 aa12.47□□□□□ -0.41
PPFIA2-228ENST00000553058 MAP3K4Q9Y6R4 1608 aa12.47□□□□□ -0.41
PPFIA2-228ENST00000553058 UNCXA6NJT0 531 aa12.46□□□□□ -0.41
PPFIA2-228ENST00000553058 TUSC1Q2TAM9 212 aa12.46□□□□□ -0.41
PPFIA2-228ENST00000553058 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
PPFIA2-228ENST00000553058 GOLGA3Q08378 1498 aa12.46□□□□□ -0.42
PPFIA2-228ENST00000553058 WDR7Q9Y4E6 1490 aa12.46□□□□□ -0.42
PPFIA2-228ENST00000553058 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
PPFIA2-228ENST00000553058 PXYLP1Q8TE99 480 aa12.45□□□□□ -0.42
PPFIA2-228ENST00000553058 EPAS1Q99814 870 aa12.45□□□□□ -0.42
PPFIA2-228ENST00000553058 BOLA1Q9Y3E2 137 aa12.45□□□□□ -0.42
PPFIA2-228ENST00000553058 RSPH4AQ5TD94 716 aa12.44□□□□□ -0.42
PPFIA2-228ENST00000553058 PPP1R12CQ9BZL4 782 aa12.44□□□□□ -0.42
PPFIA2-228ENST00000553058 CTTNBP2Q8WZ74 1663 aa12.43□□□□□ -0.42
PPFIA2-228ENST00000553058 SPIRE2Q8WWL2 714 aa12.43□□□□□ -0.42
PPFIA2-228ENST00000553058 RBM33Q96EV2 1170 aaKnown RBP12.43□□□□□ -0.42
PPFIA2-228ENST00000553058 SPTLC1O15269 473 aa12.42□□□□□ -0.42
PPFIA2-228ENST00000553058 AP1G2O75843 785 aa12.42□□□□□ -0.42
PPFIA2-228ENST00000553058 PHF14O94880 888 aa12.42□□□□□ -0.42
PPFIA2-228ENST00000553058 ZNF710Q8N1W2 664 aa12.42□□□□□ -0.42
PPFIA2-228ENST00000553058 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
PPFIA2-228ENST00000553058 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
PPFIA2-228ENST00000553058 ADGRG1Q9Y653 693 aa12.42□□□□□ -0.42
PPFIA2-228ENST00000553058 TSR1Q2NL82 804 aaKnown RBP12.41□□□□□ -0.42
PPFIA2-228ENST00000553058 TEX14Q8IWB6 1497 aa12.4□□□□□ -0.42
PPFIA2-228ENST00000553058 IGSF5Q9NSI5 407 aa12.4□□□□□ -0.42
PPFIA2-228ENST00000553058 BMP2KQ9NSY1 1161 aaPredicted RBP12.4□□□□□ -0.42
PPFIA2-228ENST00000553058 MAGI3Q5TCQ9 1506 aa12.4□□□□□ -0.42
PPFIA2-228ENST00000553058 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
PPFIA2-228ENST00000553058 CSPP1Q1MSJ5 1256 aa12.39□□□□□ -0.43
PPFIA2-228ENST00000553058 WASHC4Q2M389 1173 aa12.39□□□□□ -0.43
PPFIA2-228ENST00000553058 ATP10BO94823 1461 aa12.39□□□□□ -0.43
PPFIA2-228ENST00000553058 CD109Q6YHK3 1445 aa12.38□□□□□ -0.43
PPFIA2-228ENST00000553058 RBM47A0AV96 593 aaKnown RBP12.38□□□□□ -0.43
PPFIA2-228ENST00000553058 G3V3G9 751 aa12.38□□□□□ -0.43
PPFIA2-228ENST00000553058 USP17L8P0C7I0 530 aa12.38□□□□□ -0.43
PPFIA2-228ENST00000553058 RSBN1LQ6PCB5 846 aaPredicted RBP12.38□□□□□ -0.43
PPFIA2-228ENST00000553058 NDUFB9Q9Y6M9 179 aa12.38□□□□□ -0.43
PPFIA2-228ENST00000553058 PALM3A6NDB9 673 aaPredicted RBP12.37□□□□□ -0.43
PPFIA2-228ENST00000553058 QPCTQ16769 361 aa12.37□□□□□ -0.43
PPFIA2-228ENST00000553058 KCNH8Q96L42 1107 aa12.37□□□□□ -0.43
PPFIA2-228ENST00000553058 GNEQ9Y223 722 aaKnown RBP12.37□□□□□ -0.43
PPFIA2-228ENST00000553058 ADGRL1O94910 1474 aa12.37□□□□□ -0.43
PPFIA2-228ENST00000553058 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
PPFIA2-228ENST00000553058 LILRB3O75022 631 aa12.36□□□□□ -0.43
PPFIA2-228ENST00000553058 LMOD1P29536 600 aaPredicted RBP12.36□□□□□ -0.43
PPFIA2-228ENST00000553058 PADI6Q6TGC4 694 aa12.36□□□□□ -0.43
PPFIA2-228ENST00000553058 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
PPFIA2-228ENST00000553058 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
PPFIA2-228ENST00000553058 ATG7O95352 703 aa12.35□□□□□ -0.43
PPFIA2-228ENST00000553058 RTL5Q5HYW3 569 aaPredicted RBP12.35□□□□□ -0.43
PPFIA2-228ENST00000553058 PELP1Q8IZL8 1130 aaKnown RBP12.34□□□□□ -0.43
PPFIA2-228ENST00000553058 SLAIN1Q8ND83 568 aa12.34□□□□□ -0.43
PPFIA2-228ENST00000553058 PTCD2Q8WV60 388 aaKnown RBP12.34□□□□□ -0.43
PPFIA2-228ENST00000553058 PCDHGA10Q9Y5H3 936 aa12.33□□□□□ -0.44
PPFIA2-228ENST00000553058 CFAP43Q8NDM7 1665 aa12.32□□□□□ -0.44
PPFIA2-228ENST00000553058 EEA1Q15075 1411 aa12.32□□□□□ -0.44
PPFIA2-228ENST00000553058 CDCA8Q53HL2 280 aa12.32□□□□□ -0.44
PPFIA2-228ENST00000553058 POTEHQ6S545 545 aa12.32□□□□□ -0.44
PPFIA2-228ENST00000553058 ALG2Q9H553 416 aa12.32□□□□□ -0.44
PPFIA2-228ENST00000553058 MOXD2PA6NHM9 499 aa12.31□□□□□ -0.44
PPFIA2-228ENST00000553058 TFIP11Q9UBB9 837 aaKnown RBP12.31□□□□□ -0.44
PPFIA2-228ENST00000553058 NUP153P49790 1475 aaKnown RBP12.31□□□□□ -0.44
PPFIA2-228ENST00000553058 ARAP3Q8WWN8 1544 aa12.31□□□□□ -0.44
PPFIA2-228ENST00000553058 GJA5P36382 358 aa12.3□□□□□ -0.44
PPFIA2-228ENST00000553058 VAC14Q08AM6 782 aa12.3□□□□□ -0.44
PPFIA2-228ENST00000553058 TYW1BQ6NUM6 668 aa12.3□□□□□ -0.44
PPFIA2-228ENST00000553058 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
PPFIA2-228ENST00000553058 PCDHB15Q9Y5E8 787 aa12.3□□□□□ -0.44
PPFIA2-228ENST00000553058 CD46P15529 392 aa12.29□□□□□ -0.44
PPFIA2-228ENST00000553058 TTC13Q8NBP0 860 aa12.29□□□□□ -0.44
PPFIA2-228ENST00000553058 FHOD3Q2V2M9 1422 aa12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 GPR37L1O60883 481 aa12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 NUTM2DQ5VT03 806 aaPredicted RBP12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 B4GALNT3Q6L9W6 998 aa12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 CERKQ8TCT0 537 aa12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 UCN2Q96RP3 112 aa12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 KIAA1522Q9P206 1035 aaPredicted RBP12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 ABCA9Q8IUA7 1624 aa12.28□□□□□ -0.44
PPFIA2-228ENST00000553058 RAPGEF6Q8TEU7 1601 aa12.27□□□□□ -0.44
PPFIA2-228ENST00000553058 NDUFV2P19404 249 aa12.27□□□□□ -0.45
PPFIA2-228ENST00000553058 FAM177A1Q8N128 213 aaPredicted RBP12.27□□□□□ -0.45
PPFIA2-228ENST00000553058 OCEL1Q9H607 264 aa12.27□□□□□ -0.45
PPFIA2-228ENST00000553058 TXNDC2Q86VQ3 553 aa12.26□□□□□ -0.45
PPFIA2-228ENST00000553058 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
PPFIA2-228ENST00000553058 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
PPFIA2-228ENST00000553058 CABLES1Q8TDN4 633 aa12.26□□□□□ -0.45
PPFIA2-228ENST00000553058 FAM9AQ8IZU1 332 aaPredicted RBP12.25□□□□□ -0.45
PPFIA2-228ENST00000553058 PHLDB1Q86UU1 1377 aa12.25□□□□□ -0.45
PPFIA2-228ENST00000553058 MRRFQ96E11 262 aaKnown RBP12.24□□□□□ -0.45
PPFIA2-228ENST00000553058 RBM27Q9P2N5 1060 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms