RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 TBX22Q9Y458 520 aa17.34■□□□□ 0.37
CACNB3-223ENST00000552480 PLEKHH1Q9ULM0 1364 aa17.32■□□□□ 0.36
CACNB3-223ENST00000552480 NINLQ9Y2I6 1382 aa17.32■□□□□ 0.36
CACNB3-223ENST00000552480 MINK1Q8N4C8 1332 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-223ENST00000552480 KNSTRNQ9Y448 316 aa17.32■□□□□ 0.36
CACNB3-223ENST00000552480 NPC1L1Q9UHC9 1359 aa17.31■□□□□ 0.36
CACNB3-223ENST00000552480 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
CACNB3-223ENST00000552480 ATAD2Q6PL18 1390 aa17.3■□□□□ 0.36
CACNB3-223ENST00000552480 ANKLE2Q86XL3 938 aa17.3■□□□□ 0.36
CACNB3-223ENST00000552480 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
CACNB3-223ENST00000552480 WAPLQ7Z5K2 1190 aa17.29■□□□□ 0.36
CACNB3-223ENST00000552480 SLC26A8Q96RN1 970 aa17.29■□□□□ 0.36
CACNB3-223ENST00000552480 XRN1Q8IZH2 1706 aaKnown RBP17.29■□□□□ 0.36
CACNB3-223ENST00000552480 USP32Q8NFA0 1604 aa17.29■□□□□ 0.36
CACNB3-223ENST00000552480 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
CACNB3-223ENST00000552480 ADGRB2O60241 1585 aa17.28■□□□□ 0.36
CACNB3-223ENST00000552480 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
CACNB3-223ENST00000552480 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
CACNB3-223ENST00000552480 MRS2Q9HD23 443 aa17.28■□□□□ 0.36
CACNB3-223ENST00000552480 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
CACNB3-223ENST00000552480 PTCH1Q13635 1447 aa17.28■□□□□ 0.36
CACNB3-223ENST00000552480 ROBO2Q9HCK4 1378 aa17.28■□□□□ 0.36
CACNB3-223ENST00000552480 CCDC184Q52MB2 194 aa17.27■□□□□ 0.36
CACNB3-223ENST00000552480 AMER1Q5JTC6 1135 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-223ENST00000552480 TMC1Q8TDI8 760 aa17.27■□□□□ 0.36
CACNB3-223ENST00000552480 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
CACNB3-223ENST00000552480 ANKRD36BQ8N2N9 1353 aa17.27■□□□□ 0.35
CACNB3-223ENST00000552480 CC2D1BQ5T0F9 858 aaKnown RBP17.26■□□□□ 0.35
CACNB3-223ENST00000552480 CDK19Q9BWU1 502 aa17.26■□□□□ 0.35
CACNB3-223ENST00000552480 SLC12A5Q9H2X9 1139 aa17.25■□□□□ 0.35
CACNB3-223ENST00000552480 NSD3Q9BZ95 1437 aa17.24■□□□□ 0.35
CACNB3-223ENST00000552480 CARD14Q9BXL6 1004 aa17.24■□□□□ 0.35
CACNB3-223ENST00000552480 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.24■□□□□ 0.35
CACNB3-223ENST00000552480 NPHP4O75161 1426 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-223ENST00000552480 KDM4FA0A1W2PPD8 638 aa17.23■□□□□ 0.35
CACNB3-223ENST00000552480 NLRP13Q86W25 1043 aa17.23■□□□□ 0.35
CACNB3-223ENST00000552480 AMOTL2Q9Y2J4 779 aa17.23■□□□□ 0.35
CACNB3-223ENST00000552480 WASLO00401 505 aaPredicted RBP17.22■□□□□ 0.35
CACNB3-223ENST00000552480 CHD2O14647 1828 aaKnown RBP17.21■□□□□ 0.35
CACNB3-223ENST00000552480 ATP7BP35670 1465 aa17.2■□□□□ 0.34
CACNB3-223ENST00000552480 CD163L1Q9NR16 1453 aa17.19■□□□□ 0.34
CACNB3-223ENST00000552480 A0A1W2PP64 1363 aa17.19■□□□□ 0.34
CACNB3-223ENST00000552480 TERF2IPQ9NYB0 399 aa17.19■□□□□ 0.34
CACNB3-223ENST00000552480 NSD2O96028 1365 aa17.18■□□□□ 0.34
CACNB3-223ENST00000552480 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
CACNB3-223ENST00000552480 CGNL1Q0VF96 1302 aa17.17■□□□□ 0.34
CACNB3-223ENST00000552480 TOPAZ1Q8N9V7 1692 aa17.16■□□□□ 0.34
CACNB3-223ENST00000552480 HDGFL2Q7Z4V5 671 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-223ENST00000552480 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
CACNB3-223ENST00000552480 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
CACNB3-223ENST00000552480 PPIP5K1Q6PFW1 1433 aa17.15■□□□□ 0.34
CACNB3-223ENST00000552480 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
CACNB3-223ENST00000552480 PNISRQ8TF01 805 aaKnown RBP17.15■□□□□ 0.34
CACNB3-223ENST00000552480 NCKAP5LQ9HCH0 1330 aa17.15■□□□□ 0.34
CACNB3-223ENST00000552480 KCNA6P17658 529 aa17.14■□□□□ 0.33
CACNB3-223ENST00000552480 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
CACNB3-223ENST00000552480 CABP1Q9NZU7 370 aa17.14■□□□□ 0.33
CACNB3-223ENST00000552480 ANKRD26Q9UPS8 1709 aa17.13■□□□□ 0.33
CACNB3-223ENST00000552480 ITSN1Q15811 1721 aa17.13■□□□□ 0.33
CACNB3-223ENST00000552480 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
CACNB3-223ENST00000552480 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
CACNB3-223ENST00000552480 KIF20BQ96Q89 1820 aa17.12■□□□□ 0.33
CACNB3-223ENST00000552480 MON2Q7Z3U7 1717 aa17.11■□□□□ 0.33
CACNB3-223ENST00000552480 HNRNPUQ00839 825 aaKnown RBP eCLIP17.11■□□□□ 0.33
CACNB3-223ENST00000552480 CCDC61Q9Y6R9 512 aa17.11■□□□□ 0.33
CACNB3-223ENST00000552480 PRR36Q9H6K5 1346 aa17.11■□□□□ 0.33
CACNB3-223ENST00000552480 MORC1Q86VD1 984 aa17.1■□□□□ 0.33
CACNB3-223ENST00000552480 INSRP06213 1382 aa17.09■□□□□ 0.33
CACNB3-223ENST00000552480 EDC4Q6P2E9 1401 aaKnown RBP17.09■□□□□ 0.33
CACNB3-223ENST00000552480 NALCNQ8IZF0 1738 aa17.09■□□□□ 0.33
CACNB3-223ENST00000552480 FMN2Q9NZ56 1722 aa17.09■□□□□ 0.33
CACNB3-223ENST00000552480 LMTK3Q96Q04 1460 aa17.08■□□□□ 0.32
CACNB3-223ENST00000552480 ANKARQ7Z5J8 1434 aa17.08■□□□□ 0.32
CACNB3-223ENST00000552480 NKTRP30414 1462 aaKnown RBP17.06■□□□□ 0.32
CACNB3-223ENST00000552480 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
CACNB3-223ENST00000552480 NRKQ7Z2Y5 1582 aa17.06■□□□□ 0.32
CACNB3-223ENST00000552480 ADGRL3Q9HAR2 1447 aa17.05■□□□□ 0.32
CACNB3-223ENST00000552480 ZNF692Q9BU19 519 aaPredicted RBP17.05■□□□□ 0.32
CACNB3-223ENST00000552480 POLR3AO14802 1390 aaPredicted RBP17.04■□□□□ 0.32
CACNB3-223ENST00000552480 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
CACNB3-223ENST00000552480 FYB1O15117 783 aa17.04■□□□□ 0.32
CACNB3-223ENST00000552480 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
CACNB3-223ENST00000552480 HSPA2P54652 639 aa17.02■□□□□ 0.32
CACNB3-223ENST00000552480 GGNBP2Q9H3C7 697 aa17.02■□□□□ 0.32
CACNB3-223ENST00000552480 ACEP12821 1306 aa17■□□□□ 0.31
CACNB3-223ENST00000552480 RGPD8O14715 1765 aaPredicted RBP17■□□□□ 0.31
CACNB3-223ENST00000552480 STRCQ7RTU9 1775 aa17■□□□□ 0.31
CACNB3-223ENST00000552480 NUTM2FA1L443 756 aa17■□□□□ 0.31
CACNB3-223ENST00000552480 USP6P35125 1406 aa17■□□□□ 0.31
CACNB3-223ENST00000552480 WDR43Q15061 677 aaKnown RBP eCLIP17■□□□□ 0.31
CACNB3-223ENST00000552480 TNNT2P45379 298 aaPredicted RBP16.99■□□□□ 0.31
CACNB3-223ENST00000552480 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.99■□□□□ 0.31
CACNB3-223ENST00000552480 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
CACNB3-223ENST00000552480 SHPRHQ149N8 1683 aa16.98■□□□□ 0.31
CACNB3-223ENST00000552480 STRCP1A6NGW2 1772 aa16.97■□□□□ 0.31
CACNB3-223ENST00000552480 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
CACNB3-223ENST00000552480 SSH2Q76I76 1423 aa16.96■□□□□ 0.31
CACNB3-223ENST00000552480 NCOA3Q9Y6Q9 1424 aa16.96■□□□□ 0.31
CACNB3-223ENST00000552480 PROSER2Q86WR7 435 aaPredicted RBP16.96■□□□□ 0.31
CACNB3-223ENST00000552480 TTC21BQ7Z4L5 1316 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms