RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 TBX22Q9Y458 520 aa26.67■■□□□ 1.86
MTA1-220ENST00000552286 CPS1P31327 1500 aa26.66■■□□□ 1.86
MTA1-220ENST00000552286 TECPR2O15040 1411 aa26.66■■□□□ 1.86
MTA1-220ENST00000552286 MYBBP1AQ9BQG0 1328 aaKnown RBP26.65■■□□□ 1.86
MTA1-220ENST00000552286 TULP4Q9NRJ4 1543 aa26.64■■□□□ 1.86
MTA1-220ENST00000552286 PANK3Q9H999 370 aa26.64■■□□□ 1.86
MTA1-220ENST00000552286 MYOM1P52179 1685 aa26.64■■□□□ 1.85
MTA1-220ENST00000552286 PTPRUQ92729 1446 aa26.63■■□□□ 1.85
MTA1-220ENST00000552286 PARD3Q8TEW0 1356 aa26.62■■□□□ 1.85
MTA1-220ENST00000552286 PLEKHH1Q9ULM0 1364 aa26.62■■□□□ 1.85
MTA1-220ENST00000552286 WAPLQ7Z5K2 1190 aa26.62■■□□□ 1.85
MTA1-220ENST00000552286 TMC1Q8TDI8 760 aa26.61■■□□□ 1.85
MTA1-220ENST00000552286 MINK1Q8N4C8 1332 aaPredicted RBP26.61■■□□□ 1.85
MTA1-220ENST00000552286 BRD4O60885 1362 aaPredicted RBP26.61■■□□□ 1.85
MTA1-220ENST00000552286 EVC2Q86UK5 1308 aa26.6■■□□□ 1.85
MTA1-220ENST00000552286 NPHP4O75161 1426 aaPredicted RBP26.6■■□□□ 1.85
MTA1-220ENST00000552286 FAM135BQ49AJ0 1406 aa26.6■■□□□ 1.85
MTA1-220ENST00000552286 ZBED9Q6R2W3 1325 aa26.6■■□□□ 1.85
MTA1-220ENST00000552286 PNISRQ8TF01 805 aaKnown RBP26.59■■□□□ 1.85
MTA1-220ENST00000552286 NCKAP5LQ9HCH0 1330 aa26.58■■□□□ 1.85
MTA1-220ENST00000552286 ROBO2Q9HCK4 1378 aa26.58■■□□□ 1.85
MTA1-220ENST00000552286 XRN1Q8IZH2 1706 aaKnown RBP26.57■■□□□ 1.84
MTA1-220ENST00000552286 SIRT1Q96EB6 747 aa26.57■■□□□ 1.84
MTA1-220ENST00000552286 AMOTL2Q9Y2J4 779 aa26.56■■□□□ 1.84
MTA1-220ENST00000552286 PIK3R4Q99570 1358 aa26.56■■□□□ 1.84
MTA1-220ENST00000552286 LMTK3Q96Q04 1460 aa26.55■■□□□ 1.84
MTA1-220ENST00000552286 HSPA2P54652 639 aa26.53■■□□□ 1.84
MTA1-220ENST00000552286 NLRP13Q86W25 1043 aa26.53■■□□□ 1.84
MTA1-220ENST00000552286 PTCH1Q13635 1447 aa26.53■■□□□ 1.84
MTA1-220ENST00000552286 FKBP8Q14318 412 aa26.52■■□□□ 1.84
MTA1-220ENST00000552286 CHD2O14647 1828 aaKnown RBP26.52■■□□□ 1.84
MTA1-220ENST00000552286 CABP2Q9NPB3 220 aa26.51■■□□□ 1.83
MTA1-220ENST00000552286 SRPK2P78362 688 aaKnown RBP26.51■■□□□ 1.83
MTA1-220ENST00000552286 CC2D1BQ5T0F9 858 aaKnown RBP26.51■■□□□ 1.83
MTA1-220ENST00000552286 NEFLP07196 543 aa26.5■■□□□ 1.83
MTA1-220ENST00000552286 PUS7Q96PZ0 661 aaKnown RBP26.49■■□□□ 1.83
MTA1-220ENST00000552286 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.48■■□□□ 1.83
MTA1-220ENST00000552286 KCNA6P17658 529 aa26.47■■□□□ 1.83
MTA1-220ENST00000552286 CDK19Q9BWU1 502 aa26.47■■□□□ 1.83
MTA1-220ENST00000552286 KNSTRNQ9Y448 316 aa26.46■■□□□ 1.83
MTA1-220ENST00000552286 ADGRB2O60241 1585 aa26.46■■□□□ 1.83
MTA1-220ENST00000552286 ATAD2Q6PL18 1390 aa26.45■■□□□ 1.82
MTA1-220ENST00000552286 SLC12A5Q9H2X9 1139 aa26.43■■□□□ 1.82
MTA1-220ENST00000552286 WASLO00401 505 aaPredicted RBP26.42■■□□□ 1.82
MTA1-220ENST00000552286 AMER1Q5JTC6 1135 aaPredicted RBP26.41■■□□□ 1.82
MTA1-220ENST00000552286 STRCQ7RTU9 1775 aa26.4■■□□□ 1.82
MTA1-220ENST00000552286 NINLQ9Y2I6 1382 aa26.39■■□□□ 1.82
MTA1-220ENST00000552286 NWD1Q149M9 1564 aa26.39■■□□□ 1.82
MTA1-220ENST00000552286 NPC1L1Q9UHC9 1359 aa26.37■■□□□ 1.81
MTA1-220ENST00000552286 ANKRD36BQ8N2N9 1353 aa26.35■■□□□ 1.81
MTA1-220ENST00000552286 CARD14Q9BXL6 1004 aa26.34■■□□□ 1.81
MTA1-220ENST00000552286 NALCNQ8IZF0 1738 aa26.34■■□□□ 1.81
MTA1-220ENST00000552286 ATP7BP35670 1465 aa26.32■■□□□ 1.8
MTA1-220ENST00000552286 NSD3Q9BZ95 1437 aa26.32■■□□□ 1.8
MTA1-220ENST00000552286 SMG6Q86US8 1419 aaKnown RBP26.32■■□□□ 1.8
MTA1-220ENST00000552286 A0A1W2PP64 1363 aa26.31■■□□□ 1.8
MTA1-220ENST00000552286 NUDT16Q96DE0 195 aaKnown RBP26.31■■□□□ 1.8
MTA1-220ENST00000552286 CABP1Q9NZU7 370 aa26.31■■□□□ 1.8
MTA1-220ENST00000552286 PPP2R1AP30153 589 aa26.3■■□□□ 1.8
MTA1-220ENST00000552286 PPIP5K1Q6PFW1 1433 aa26.3■■□□□ 1.8
MTA1-220ENST00000552286 INSRP06213 1382 aa26.3■■□□□ 1.8
MTA1-220ENST00000552286 CD163L1Q9NR16 1453 aa26.3■■□□□ 1.8
MTA1-220ENST00000552286 RBM33Q96EV2 1170 aaKnown RBP26.29■■□□□ 1.8
MTA1-220ENST00000552286 NKTRP30414 1462 aaKnown RBP26.28■■□□□ 1.8
MTA1-220ENST00000552286 PRR36Q9H6K5 1346 aa26.28■■□□□ 1.8
MTA1-220ENST00000552286 TOPAZ1Q8N9V7 1692 aa26.28■■□□□ 1.8
MTA1-220ENST00000552286 TERF2IPQ9NYB0 399 aa26.28■■□□□ 1.8
MTA1-220ENST00000552286 STRCP1A6NGW2 1772 aa26.28■■□□□ 1.8
MTA1-220ENST00000552286 USP32Q8NFA0 1604 aa26.28■■□□□ 1.8
MTA1-220ENST00000552286 NUDCQ9Y266 331 aa26.27■■□□□ 1.8
MTA1-220ENST00000552286 NUTM2FA1L443 756 aa26.26■■□□□ 1.79
MTA1-220ENST00000552286 CCDC61Q9Y6R9 512 aa26.26■■□□□ 1.79
MTA1-220ENST00000552286 CDC42BPGQ6DT37 1551 aa26.26■■□□□ 1.79
MTA1-220ENST00000552286 PELP1Q8IZL8 1130 aaKnown RBP26.26■■□□□ 1.79
MTA1-220ENST00000552286 FMN2Q9NZ56 1722 aa26.25■■□□□ 1.79
MTA1-220ENST00000552286 SENP3-EIF4A1A0A087X0R7 540 aa26.25■■□□□ 1.79
MTA1-220ENST00000552286 HDGFL2Q7Z4V5 671 aaPredicted RBP26.25■■□□□ 1.79
MTA1-220ENST00000552286 ADGRL3Q9HAR2 1447 aa26.25■■□□□ 1.79
MTA1-220ENST00000552286 ITSN1Q15811 1721 aa26.24■■□□□ 1.79
MTA1-220ENST00000552286 RGPD8O14715 1765 aaPredicted RBP26.23■■□□□ 1.79
MTA1-220ENST00000552286 PROSER2Q86WR7 435 aaPredicted RBP26.22■■□□□ 1.79
MTA1-220ENST00000552286 BLMP54132 1417 aaPredicted RBP26.22■■□□□ 1.79
MTA1-220ENST00000552286 C14orf37Q86TY3 774 aa26.22■■□□□ 1.79
MTA1-220ENST00000552286 CGNL1Q0VF96 1302 aa26.2■■□□□ 1.78
MTA1-220ENST00000552286 AKAP12Q02952 1782 aa26.2■■□□□ 1.78
MTA1-220ENST00000552286 IRX6P78412 446 aaPredicted RBP26.2■■□□□ 1.78
MTA1-220ENST00000552286 CPSF1Q10570 1443 aaKnown RBP26.19■■□□□ 1.78
MTA1-220ENST00000552286 ERICH6BQ5W0A0 696 aa26.18■■□□□ 1.78
MTA1-220ENST00000552286 ANKARQ7Z5J8 1434 aa26.18■■□□□ 1.78
MTA1-220ENST00000552286 MON2Q7Z3U7 1717 aa26.18■■□□□ 1.78
MTA1-220ENST00000552286 ADAMTS8Q9UP79 889 aa26.15■■□□□ 1.78
MTA1-220ENST00000552286 KIF20BQ96Q89 1820 aa26.14■■□□□ 1.78
MTA1-220ENST00000552286 NSD2O96028 1365 aa26.14■■□□□ 1.77
MTA1-220ENST00000552286 TMEM94Q12767 1356 aa26.14■■□□□ 1.77
MTA1-220ENST00000552286 PLEKHG3A1L390 1219 aa26.13■■□□□ 1.77
MTA1-220ENST00000552286 PDE3BQ13370 1112 aa26.13■■□□□ 1.77
MTA1-220ENST00000552286 WDR43Q15061 677 aaKnown RBP eCLIP26.12■■□□□ 1.77
MTA1-220ENST00000552286 EDC4Q6P2E9 1401 aaKnown RBP26.12■■□□□ 1.77
MTA1-220ENST00000552286 ACEP12821 1306 aa26.12■■□□□ 1.77
MTA1-220ENST00000552286 ANKRD26Q9UPS8 1709 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms